Homologs of yhbQ from Escherichia coli ECRC101

yhbQ: DNA damage response exodeoxyribonuclease YhbQ
SEED: FIG137864: putative endonuclease containing a URI domain
KEGG: putative endonuclease

72 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Escherichia coli ECRC101 OKFHMN_18190 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 100 100
o Escherichia coli ECRC101 MCAODC_08710 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 100 100
o Escherichia coli ECRC102 NIAGMN_15950 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 100 100
o Escherichia coli ECRC98 JDDGAC_21815 yhbQ DNA damage response exodeoxyribonuclease YhbQ no data 100 100
o Escherichia coli ECRC99 KEDOAH_09960 yhbQ DNA damage response exodeoxyribonuclease YhbQ no data 100 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00545 hypothetical protein insig. 99 100
o Escherichia coli BL21 ECD_03022 GIY-YIG nuclease superfamily protein insig. 99 100
o Escherichia coli BW25113 b3155 yhbQ hypothetical protein (NCBI) insig. 98 100
o Escherichia coli ECOR38 HEPCGN_17065 yhbQ DNA damage response exodeoxyribonuclease YhbQ cofit 98 100
o Escherichia coli ECRC62 BNILDI_01540 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 98 100
o Escherichia fergusonii Becca EFB2_00668 hypothetical protein insig. 98 100
o Escherichia coli Nissle 1917 ECOLIN_RS18125 DNA damage response exodeoxyribonuclease YhbQ insig. 98 100
o Escherichia coli ECOR27 NOLOHH_09990 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 97 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1513 FIG137864: putative endonuclease containing a URI domain insig. 82 100
o Enterobacter sp. TBS_079 MPMX20_04059 hypothetical protein insig. 76 99
o Enterobacter asburiae PDN3 EX28DRAFT_3204 Predicted endonuclease containing a URI domain insig. 75 99
o Klebsiella michiganensis M5al BWI76_RS24955 hypothetical protein insig. 75 93
  Serratia liquefaciens MT49 IAI46_02030 GIY-YIG nuclease family protein insig. 72 79
o Pectobacterium carotovorum WPP14 HER17_RS18145 GIY-YIG nuclease family protein cofit 69 80
  Vibrio cholerae E7946 ATCC 55056 CSW01_17870 GIY-YIG nuclease family protein insig. 65 79
  Dickeya dianthicola ME23 DZA65_RS03300 GIY-YIG nuclease family protein insig. 71 78
  Rahnella sp. WP5 EX31_RS08465 GIY-YIG nuclease family protein insig. 70 76
  Dickeya dadantii 3937 DDA3937_RS03130 GIY-YIG nuclease family protein insig. 69 78
  Dickeya dianthicola 67-19 HGI48_RS03305 GIY-YIG nuclease family protein insig. 70 76
  Pantoea sp. MT58 IAI47_16950 GIY-YIG nuclease family protein insig. 64 77
  Shewanella sp. ANA-3 Shewana3_0136 excinuclease ABC subunit C (RefSeq) insig. 60 76
o Erwinia tracheiphila SCR3 LU632_RS20990 GIY-YIG nuclease family protein insig. 52 92
  Marinobacter adhaerens HP15 HP15_2558 putative nuclease insig. 59 72
  Paraburkholderia sabiae LMG 24235 QEN71_RS24905 GIY-YIG nuclease family protein insig. 54 78
  Shewanella loihica PV-4 Shew_0038 excinuclease ABC subunit C (RefSeq) insig. 55 78
o Shewanella amazonensis SB2B Sama_0145 endonuclease (RefSeq) insig. 46 96
  Shewanella oneidensis MR-1 SO0145 hypothetical URI domain endonuclease (NCBI ptt file) insig. 54 78
  Kangiella aquimarina DSM 16071 B158DRAFT_1379 Predicted endonuclease containing a URI domain insig. 49 79
o Desulfovibrio vulgaris Miyazaki F DvMF_2126 Excinuclease ABC C subunit domain protein (RefSeq) insig. 40 95
  Lysobacter sp. OAE881 ABIE51_RS14940 GIY-YIG nuclease family protein insig. 50 78
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_908 FIG00955494: hypothetical protein no data 45 82
o Desulfovibrio vulgaris Hildenborough JW710 DVU3309 endo/excinuclease amino terminal domain protein (TIGR) sig. 42 91
o Paraburkholderia graminis OAS925 ABIE53_001343 putative endonuclease sig. 41 97
  Pseudomonas fluorescens FW300-N2E3 AO353_04580 GIY-YIG nuclease insig. 44 82
o Pseudomonas stutzeri RCH2 Psest_1218 Predicted endonuclease containing a URI domain insig. 43 84
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1705 FIG00955494: hypothetical protein insig. 45 87
  Pseudomonas sp. RS175 PFR28_03536 hypothetical protein insig. 44 81
  Pseudomonas fluorescens FW300-N2C3 AO356_17425 GIY-YIG nuclease insig. 45 78
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5411 FIG00955494: hypothetical protein insig. 45 78
o Pseudomonas fluorescens SBW25 PFLU_RS05060 GIY-YIG nuclease family protein insig. 42 81
o Pseudomonas fluorescens SBW25-INTG PFLU_RS05060 GIY-YIG nuclease family protein insig. 42 81
o Pseudomonas simiae WCS417 PS417_04990 GIY-YIG nuclease insig. 42 81
o Burkholderia phytofirmans PsJN BPHYT_RS05470 excinuclease ABC subunit C insig. 42 93
  Dechlorosoma suillum PS Dsui_2028 putative endonuclease containing a URI domain no data 54 69
o Pseudomonas putida KT2440 PP_0972 UPF0213 protein PP_0972 insig. 42 86
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00216 putative endonuclease no data 46 79
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00190 GIY-YIG nuclease family protein insig. 49 73
  Pseudomonas sp. S08-1 OH686_17835 Endo/excinuclease domain protein insig. 46 78
  Pseudomonas syringae pv. syringae B728a Psyr_1080 Excinuclease ABC, C subunit, N-terminal insig. 41 78
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1080 Excinuclease ABC, C subunit, N-terminal insig. 41 78
  Alteromonas macleodii MIT1002 MIT1002_02877 GIY-YIG nuclease superfamily protein insig. 42 79
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1380.1 COG2827: putative endonuclease containing a URI domain insig. 42 73
  Cupriavidus basilensis FW507-4G11 RR42_RS36170 hypothetical protein insig. 44 79
  Variovorax sp. OAS795 ABID97_RS06665 GIY-YIG nuclease family protein insig. 41 74
  Rhodanobacter denitrificans MT42 LRK55_RS11850 GIY-YIG nuclease family protein insig. 43 77
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12115 GIY-YIG nuclease family protein insig. 43 77
  Rhodanobacter sp. FW510-T8 OKGIIK_11815 GIY-YIG domain-containing protein insig. 42 72
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00620 GIY-YIG nuclease family protein insig. 31 90
  Magnetospirillum magneticum AMB-1 AMB_RS11455 GIY-YIG nuclease family protein cofit 40 69
  Acidovorax sp. GW101-3H11 Ac3H11_2277 putative periplasmic protein kinase ArgK and related GTPases of G3E family sig. 38 80
  Rhodanobacter sp. FW510-T8 OKGIIK_00785 GIY-YIG nuclease family protein insig. 30 73
  Fusobacterium nucleatum SB010 HUW76_09640 GIY-YIG nuclease family protein cofit 29 95
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1343 Predicted endonuclease containing a URI domain insig. 33 76
  Herbaspirillum seropedicae SmR1 HSERO_RS02335 excinuclease ABC subunit C insig. 32 77
  Magnetospirillum magneticum AMB-1 AMB_RS20825 excinuclease ABC subunit C insig. 29 77
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1342 Predicted endonuclease containing a URI domain insig. 31 78
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1064 Predicted endonuclease containing a URI domain insig. 38 34