| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Enterobacter sp. TBS_079 | MPMX20_00403 | | hypothetical protein | sig. | 100 | 100 |
| | Enterobacter sp. TBS_079 | MPMX20_00404 | | hypothetical protein | cofit | 59 | 99 |
| | Enterobacter sp. TBS_079 | MPMX20_00402 | | hypothetical protein | insig. | 54 | 99 |
| | Sinorhizobium meliloti 1021 | SMa1067 | | transcriptional regulator | insig. | 42 | 100 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03624 | | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases | no data | 25 | 95 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3110 | | cyclic nucleotide-binding protein (RefSeq) | insig. | 24 | 92 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_11565 | | Crp/Fnr family transcriptional regulator | insig. | 26 | 91 |
| o | Rhodopseudomonas palustris CGA009 | TX73_020705 | | Crp/Fnr family transcriptional regulator | insig. | 25 | 92 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS34870 | | Crp/Fnr family transcriptional regulator | no data | 25 | 95 |
| | Pseudomonas sp. S08-1 | OH686_11910 | | Transcriptional regulator, Crp/Fnr family | insig. | 27 | 91 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_481 | | transcriptional regulator, Crp/Fnr family | insig. | 25 | 91 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS16350 | | Crp/Fnr family transcriptional regulator | insig. | 24 | 94 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1722 | | transcriptional regulator, Crp/Fnr family | insig. | 25 | 91 |
| | Paraburkholderia graminis OAS925 | ABIE53_004632 | | CRP/FNR family cyclic AMP-dependent transcriptional regulator | insig. | 24 | 95 |
| o | Pseudomonas simiae WCS417 | PS417_00955 | | Crp/Fnr family transcriptional regulator | insig. | 26 | 88 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS03515 | | Crp/Fnr family transcriptional regulator | insig. | 27 | 91 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3997 | | transcriptional regulator, Crp/Fnr family | insig. | 26 | 88 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS00970 | | Crp/Fnr family transcriptional regulator | insig. | 26 | 91 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS00970 | | Crp/Fnr family transcriptional regulator | insig. | 26 | 91 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS05355 | | Crp/Fnr family transcriptional regulator | insig. | 25 | 92 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_10645 | | Crp/Fnr family transcriptional regulator | insig. | 26 | 90 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS29000 | | Crp/Fnr family transcriptional regulator | insig. | 27 | 90 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS25385 | | cyclic nucleotide-binding protein | insig. | 26 | 95 |
| | Acinetobacter baumannii LAC-4 | RR41_RS11600 | | Crp/Fnr family transcriptional regulator | insig. | 23 | 92 |
| | Pseudomonas sp. SVBP6 | COO64_RS12305 | | Crp/Fnr family transcriptional regulator | insig. | 24 | 92 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_24085 | | Crp/Fnr family transcriptional regulator | insig. | 25 | 90 |
| | Pseudomonas sp. DMC3 | GFF4244 | | CRP-like cAMP-activated global transcriptional regulator | insig. | 25 | 91 |
| | Azospirillum sp. SherDot2 | MPMX19_03723 | | hypothetical protein | no data | 29 | 88 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS28775 | | hypothetical protein | insig. | 22 | 92 |
| | Azospirillum brasilense Sp245 | AZOBR_RS09400 | | transcriptional regulator Crp/Fnr family | insig. | 26 | 87 |
| o | Pseudomonas sp. RS175 | PFR28_04770 | | CRP-like cAMP-activated global transcriptional regulator | insig. | 26 | 90 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2063 | | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases | insig. | 23 | 90 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS23530 | | Crp/Fnr family transcriptional regulator | insig. | 30 | 62 |
| | Variovorax sp. SCN45 | GFF6806 | | transcriptional regulator, Crp/Fnr family | no data | 25 | 90 |
| o | Phaeobacter inhibens DSM 17395 | PGA1_78p00330 | | putative transcriptional regulator | no data | 24 | 91 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0243 | | cyclic nucleotide-binding protein | sig. | 30 | 52 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0243 | | cyclic nucleotide-binding protein | insig. | 30 | 52 |
| | Bifidobacterium breve UCC2003 | BBR_RS12880 | | Crp/Fnr family transcriptional regulator | strong | 26 | 93 |
| o | Variovorax sp. OAS795 | ABID97_RS18055 | | Crp/Fnr family transcriptional regulator | no data | 27 | 90 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS25550 | | Crp/Fnr family transcriptional regulator | insig. | 25 | 81 |
| | Alteromonas macleodii MIT1002 | MIT1002_02534 | | cAMP regulatory protein | insig. | 24 | 93 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS03320 | | Crp/Fnr family transcriptional regulator | insig. | 22 | 96 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3092 | | transcriptional regulator, Crp/Fnr family | insig. | 23 | 93 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS27910 | | Crp/Fnr family transcriptional regulator | sig. | 23 | 91 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS19890 | | Crp/Fnr family transcriptional regulator | insig. | 22 | 81 |
| | Ralstonia solanacearum UW163 | UW163_RS19285 | | Crp/Fnr family transcriptional regulator | insig. | 22 | 81 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS18050 | | Crp/Fnr family transcriptional regulator | no data | 21 | 88 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS15200 | | Crp/Fnr family transcriptional regulator | insig. | 25 | 81 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS02015 | | Crp/Fnr family transcriptional regulator | insig. | 24 | 85 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_944 | | transcriptional regulator, Crp/Fnr family | insig. | 22 | 94 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS04635 | | cyclic nucleotide-binding domain-containing protein | cofit | 26 | 46 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00414 | | CRP-like cAMP-activated global transcriptional regulator | cofit | 25 | 77 |
| | Azospirillum brasilense Sp245 | AZOBR_RS32695 | | hypothetical protein | no data | 27 | 79 |
| | Marinobacter adhaerens HP15 | HP15_3153 | | protein containing cyclic nucleotide-binding domain | insig. | 27 | 84 |
| | Ralstonia solanacearum UW163 | UW163_RS15340 | | Crp/Fnr family transcriptional regulator | insig. | 23 | 85 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2881 | | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases | sig. | 20 | 96 |
| | Variovorax sp. SCN45 | GFF3384 | | Transcriptional regulator, Crp/Fnr family | insig. | 24 | 87 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS09390 | | Crp/Fnr family transcriptional regulator | insig. | 24 | 83 |
| | Ralstonia solanacearum GMI1000 | RS_RS20965 | | Crp/Fnr family transcriptional regulator | insig. | 23 | 96 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.624.1 | | Cyclic AMP receptor protein | strong | 23 | 84 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS16920 | | Crp/Fnr family transcriptional regulator | strong | 23 | 88 |
| | Pseudomonas sp. BP01 | JOY50_RS18250 | crp | cAMP-activated global transcriptional regulator CRP | insig. | 21 | 82 |
| | Pseudomonas putida KT2440 | PP_0424 | | DNA-binding transcriptional dual regulator | sig. | 21 | 82 |
| | Variovorax sp. SCN45 | GFF363 | | Transcriptional regulator, Crp/Fnr family | insig. | 22 | 93 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2656 | | Fumarate and nitrate reduction regulatory protein | sig. | 24 | 81 |
| | Variovorax sp. OAS795 | ABID97_RS17015 | | Crp/Fnr family transcriptional regulator | insig. | 22 | 96 |
| | Pseudomonas segetis P6 | MPMX49_00893 | | Cyclic AMP receptor-like protein | sig. | 21 | 82 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_2531 | | transcriptional regulator, Crp/Fnr family | sig. | 22 | 92 |
| | Marinobacter adhaerens HP15 | HP15_3307 | | transcriptional regulator, Crp/Fnr family | sig. | 21 | 81 |
| | Variovorax sp. OAS795 | ABID97_RS03045 | | Crp/Fnr family transcriptional regulator | insig. | 21 | 93 |
| | Escherichia coli ECRC98 | JDDGAC_04785 | fnr | fumarate/nitrate reduction transcriptional regulator Fnr | insig. | 23 | 80 |
| | Pseudomonas sp. SVBP6 | COO64_RS22400 | crp | cAMP-activated global transcriptional regulator CRP | insig. | 21 | 82 |
| | Azospirillum brasilense Sp245 | AZOBR_RS17185 | | Crp/Fnr family transcriptional regulator | strong | 22 | 98 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS17845 | | Crp/Fnr family transcriptional regulator | insig. | 22 | 74 |
| | Pseudomonas stutzeri RCH2 | Psest_3646 | | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases | insig. | 21 | 82 |
| | Escherichia fergusonii Becca | EFB2_02593 | | Fumarate and nitrate reduction regulatory protein | sig. | 23 | 80 |
| | Escherichia coli ECOR27 | NOLOHH_19940 | fnr | fumarate/nitrate reduction transcriptional regulator Fnr | insig. | 23 | 80 |
| | Escherichia coli ECOR38 | HEPCGN_25925 | fnr | fumarate/nitrate reduction transcriptional regulator Fnr | insig. | 23 | 80 |
| | Escherichia coli ECRC100 | OKFHMN_02240 | fnr | fumarate/nitrate reduction transcriptional regulator Fnr | insig. | 23 | 80 |
| | Escherichia coli ECRC102 | NIAGMN_26410 | fnr | fumarate/nitrate reduction transcriptional regulator Fnr | insig. | 23 | 80 |
| | Escherichia coli ECRC62 | BNILDI_18090 | fnr | fumarate/nitrate reduction transcriptional regulator Fnr | strong | 23 | 80 |
| | Escherichia coli ECRC99 | KEDOAH_26530 | fnr | fumarate/nitrate reduction transcriptional regulator Fnr | no data | 23 | 80 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02348 | | Fumarate and nitrate reduction regulatory protein | insig. | 23 | 80 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS08005 | | fumarate/nitrate reduction transcriptional regulator Fnr | insig. | 23 | 80 |
| | Escherichia coli BW25113 | b1334 | fnr | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | strong | 23 | 80 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS06835 | | helix-turn-helix domain-containing protein | strong | 22 | 84 |
| | Acinetobacter baumannii LAC-4 | RR41_RS10035 | | cAMP-activated global transcriptional regulator CRP | insig. | 20 | 82 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS20530 | | Crp/Fnr family transcriptional regulator | insig. | 23 | 93 |
| | Variovorax sp. OAS795 | ABID97_RS18940 | | Crp/Fnr family transcriptional regulator | insig. | 23 | 92 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_22165 | | cAMP-regulatory protein | cofit | 20 | 83 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS01620 | | Crp/Fnr family transcriptional regulator | insig. | 22 | 83 |
| | Pseudomonas sp. S08-1 | OH686_15145 | | Cyclic AMP receptor protein | cofit | 20 | 82 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2547 | | transcriptional regulator, putative (TIGR) | strong | 22 | 83 |
| | Azospirillum sp. SherDot2 | MPMX19_05361 | | CRP-like cAMP-activated global transcriptional regulator | strong | 22 | 92 |
| | Mycobacterium tuberculosis H37Rv | Rv1675c | | Probable transcriptional regulatory protein Cmr | insig. | 24 | 95 |
| | Escherichia coli ECRC101 | MCAODC_16030 | fnr | fumarate/nitrate reduction transcriptional regulator Fnr | sig. | 23 | 80 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_1540 | | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases | cofit | 23 | 80 |
| | Enterobacter sp. TBS_079 | MPMX20_02035 | | Fumarate and nitrate reduction regulatory protein | strong | 23 | 80 |
| | Dechlorosoma suillum PS | Dsui_1107 | | cAMP-binding protein | insig. | 22 | 88 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_496 | | transcriptional regulator, Crp/Fnr family | insig. | 21 | 90 |