Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Azospirillum sp. SherDot2 | MPMX19_01958 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | insig. | 100 | 100 |
o | Azospirillum brasilense Sp245 | AZOBR_RS14285 | | transcriptional regulator | strong | 68 | 96 |
| Azospirillum brasilense Sp245 | AZOBR_RS14305 | | transcriptional regulator | cofit | 44 | 95 |
| Magnetospirillum magneticum AMB-1 | AMB_RS13380 | | fused response regulator/phosphatase | insig. | 43 | 94 |
| Azospirillum sp. SherDot2 | MPMX19_00501 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | insig. | 41 | 95 |
| Azospirillum sp. SherDot2 | MPMX19_01957 | | Sensor histidine kinase RcsC | insig. | 43 | 91 |
| Azospirillum brasilense Sp245 | AZOBR_RS12605 | | regulator | insig. | 41 | 95 |
| Magnetospirillum magneticum AMB-1 | AMB_RS18385 | | transcriptional regulator | insig. | 43 | 78 |
| Azospirillum sp. SherDot2 | MPMX19_01262 | | hypothetical protein | insig. | 39 | 83 |
| Magnetospirillum magneticum AMB-1 | AMB_RS17900 | | serine phosphatase | insig. | 38 | 82 |
| Magnetospirillum magneticum AMB-1 | AMB_RS05675 | | Serine phosphatase RsbU regulator sigma subunit | insig. | 34 | 79 |
o | Phaeobacter inhibens DSM 17395 | PGA1_c34880 | | putative response regulator | strong | 30 | 93 |
o | Pseudomonas sp. SVBP6 | COO64_RS09545 | rssB | two-component system response regulator RssB | no data | 32 | 88 |
o | Pseudomonas fluorescens SBW25 | PFLU_RS07795 | | SpoIIE family protein phosphatase | no data | 33 | 80 |
o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS07795 | | SpoIIE family protein phosphatase | no data | 33 | 80 |
o | Pseudomonas sp. DMC3 | GFF1302 | | Regulator of RpoS | no data | 31 | 95 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4462 | | Serine phosphatase RsbU, regulator of sigma subunit | insig. | 33 | 79 |
o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_60 | | Serine phosphatase RsbU, regulator of sigma subunit | no data | 33 | 80 |
o | Pseudomonas simiae WCS417 | PS417_07720 | | chemotaxis protein CheY | no data | 33 | 80 |
o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4011 | | Serine phosphatase RsbU, regulator of sigma subunit | no data | 33 | 80 |
| Pseudomonas putida KT2440 | PP_2165 | | Response regulator | no data | 32 | 80 |
o | Pseudomonas fluorescens FW300-N2C3 | AO356_02185 | | chemotaxis protein CheY | no data | 33 | 80 |
o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2260 | | Serine phosphatase RsbU, regulator of sigma subunit | no data | 33 | 80 |
| Pseudomonas sp. BP01 | JOY50_RS25185 | rssB | two-component system response regulator RssB | no data | 32 | 80 |
o | Pseudomonas aeruginosa PA14 | IKLFDK_14160 | | fused response regulator/phosphatase | no data | 31 | 95 |
o | Dinoroseobacter shibae DFL-12 | Dshi_3485 | | response regulator receiver modulated serine phosphatase (RefSeq) | sig. | 30 | 93 |
| Pseudomonas stutzeri RCH2 | Psest_2710 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | no data | 32 | 80 |
o | Pseudomonas fluorescens FW300-N2E3 | AO353_00320 | | chemotaxis protein CheY | no data | 33 | 80 |
o | Pseudomonas sp. RS175 | PFR28_01140 | | Regulator of RpoS | no data | 33 | 80 |
o | Enterobacter asburiae PDN3 | EX28DRAFT_1146 | | Serine phosphatase RsbU, regulator of sigma subunit | insig. | 29 | 87 |
o | Pseudomonas syringae pv. syringae B728a | Psyr_1912 | | Response regulator receiver:Stage II sporulation E | no data | 31 | 94 |
o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1912 | | Response regulator receiver:Stage II sporulation E | no data | 31 | 94 |
| Alteromonas macleodii MIT1002 | MIT1002_01320 | | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP | cofit | 27 | 94 |
| Pseudomonas sp. S08-1 | OH686_22730 | | Serine phosphatase RsbU, regulator of sigma subunit | no data | 31 | 80 |
| Synechocystis sp000284455 PCC 6803 | SGL_RS10415 | | SpoIIE family protein phosphatase | insig. | 27 | 83 |
| Shewanella sp. ANA-3 | Shewana3_2013 | | response regulator receiver modulated serine phosphatase (RefSeq) | cofit | 28 | 93 |
| Dechlorosoma suillum PS | Dsui_1715 | | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | cofit | 30 | 93 |
| Marinobacter adhaerens HP15 | HP15_2320 | | response regulator receiver protein | insig. | 29 | 85 |
| Pseudomonas stutzeri RCH2 | Psest_1725 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | strong | 28 | 79 |
| Pseudomonas syringae pv. syringae B728a | Psyr_3451 | | Response regulator receiver:ATP-binding region, ATPase-like:Stage II sporulation E | insig. | 29 | 79 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3451 | | Response regulator receiver:ATP-binding region, ATPase-like:Stage II sporulation E | insig. | 29 | 79 |
| Dechlorosoma suillum PS | Dsui_3468 | | Response regulator receiver domain protein,histidine kinase | cofit | 40 | 40 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS13255 | | SpoIIE family protein phosphatase | insig. | 26 | 83 |
| Pseudomonas sp. DMC3 | GFF2455 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | cofit | 30 | 79 |
| Pseudomonas aeruginosa PA14 | IKLFDK_17155 | | two-component system response regulator HsbR | insig. | 29 | 92 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_18710 | | chemotaxis protein CheY | sig. | 30 | 79 |
| Pseudomonas putida KT2440 | PP_4363 | | Sensor histidine kinase/response regulator | sig. | 30 | 79 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2410 | | protein serine/threonine phosphatase (RefSeq) | insig. | 34 | 66 |
o | Desulfovibrio vulgaris Hildenborough JW710 | DVU1451 | | response regulator (TIGR) | insig. | 27 | 94 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4347 | | Serine phosphatase RsbU, regulator of sigma subunit | insig. | 30 | 79 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3610 | | Serine phosphatase RsbU, regulator of sigma subunit | insig. | 29 | 79 |
| Pseudomonas sp. BP01 | JOY50_RS00655 | | fused response regulator/phosphatase | insig. | 29 | 79 |
| Pseudomonas sp. S08-1 | OH686_02805 | | Serine phosphatase RsbU, regulator of sigma subunit / Serine-protein kinase RsbW | cofit | 29 | 79 |
| Pseudomonas sp. SVBP6 | COO64_RS21250 | | fused response regulator/phosphatase | insig. | 30 | 79 |
| Azospirillum brasilense Sp245 | AZOBR_RS16180 | | diguanylate cyclase | strong | 47 | 31 |
| Pseudomonas sp. RS175 | PFR28_00838 | | Sensor histidine kinase RcsC | sig. | 29 | 79 |
| Azospirillum sp. SherDot2 | MPMX19_01522 | | Response regulator PleD | insig. | 45 | 31 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS32075 | | response regulator | insig. | 48 | 30 |
| Pseudomonas sp. S08-1 | OH686_16560 | | Two-component transcriptional response regulator, LuxR family | insig. | 48 | 29 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_03805 | | chemotaxis protein CheY | sig. | 29 | 79 |
| Dinoroseobacter shibae DFL-12 | Dshi_1538 | | two component transcriptional regulator, winged helix family (RefSeq) | no data | 43 | 29 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2587 | | Serine phosphatase RsbU, regulator of sigma subunit | strong | 29 | 79 |
| Agrobacterium fabrum C58 | Atu1297 | | two component response regulator | insig. | 44 | 31 |
| Alteromonas macleodii MIT1002 | MIT1002_00763 | | Cyclic di-GMP phosphodiesterase response regulator RpfG | insig. | 36 | 37 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_03275 | | hybrid sensor histidine kinase/response regulator | insig. | 38 | 40 |
| Azospirillum sp. SherDot2 | MPMX19_01858 | | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP | insig. | 44 | 28 |
| Shewanella oneidensis MR-1 | SO0860 | | response regulator (NCBI ptt file) | insig. | 37 | 42 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_19505 | | two-component system sensor histidine kinase/response regulator | insig. | 27 | 81 |
| Synechocystis sp000284455 PCC 6803 | SGL_RS08635 | | response regulator | cofit | 41 | 36 |
| Burkholderia phytofirmans PsJN | BPHYT_RS30905 | | histidine kinase | insig. | 38 | 42 |
| Pseudomonas fluorescens SBW25 | PFLU_RS21745 | | fused response regulator/phosphatase | insig. | 28 | 79 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS21745 | | fused response regulator/phosphatase | sig. | 28 | 79 |
| Shewanella loihica PV-4 | Shew_3199 | | response regulator receiver modulated metal dependent phosphohydrolase (RefSeq) | insig. | 34 | 43 |
| Pseudomonas simiae WCS417 | PS417_19775 | | chemotaxis protein CheY | insig. | 29 | 79 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03106 | | PAS domain S-box-containing protein | insig. | 37 | 38 |
| Phaeobacter inhibens DSM 17395 | PGA1_c15730 | | phosphate regulon transcriptional regulatory protein PhoB | strong | 41 | 29 |
| Paraburkholderia graminis OAS925 | ABIE53_004192 | | PAS domain S-box-containing protein | strong | 38 | 35 |
| Synechocystis sp000284455 PCC 6803 | SGL_RS00270 | | response regulator | cofit | 42 | 31 |
| Azospirillum sp. SherDot2 | MPMX19_02025 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | insig. | 45 | 31 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_181 | | Two-component response regulator | insig. | 45 | 30 |
| Synechocystis sp000284455 PCC 6803 | SGL_RS15805 | | two component system response regulator RpaA | strong | 43 | 30 |
| Azospirillum sp. SherDot2 | MPMX19_06045 | | putative cyclic di-GMP phosphodiesterase | insig. | 42 | 34 |
| Rhodopseudomonas palustris CGA009 | TX73_016195 | | PleD family two-component system response regulator | insig. | 40 | 41 |
| Kangiella aquimarina DSM 16071 | B158DRAFT_0187 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | strong | 42 | 28 |
| Shewanella sp. ANA-3 | Shewana3_3418 | | response regulator receiver modulated metal dependent phosphohydrolase (RefSeq) | insig. | 35 | 42 |
| Rhizobium sp. OAE497 | ABIE40_RS07330 | | PleD family two-component system response regulator | cofit | 41 | 31 |
| Shewanella amazonensis SB2B | Sama_2951 | | response regulator receiver protein (RefSeq) | insig. | 35 | 43 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS34705 | | hypothetical protein | insig. | 44 | 32 |
| Marinobacter adhaerens HP15 | HP15_3660 | | two-component response regulator | insig. | 43 | 26 |
| Acidovorax sp. GW101-3H11 | Ac3H11_3643 | | Sensory box histidine kinase/response regulator | insig. | 39 | 36 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS13200 | | transcriptional regulator | insig. | 45 | 30 |
| Sinorhizobium meliloti 1021 | SMc01370 | | response regulator PleD | insig. | 45 | 30 |
| Synechocystis sp000284455 PCC 6803 | SGL_RS03320 | | EAL domain-containing protein | insig. | 32 | 38 |
| Pseudomonas fluorescens SBW25 | PFLU_RS12370 | | response regulator transcription factor | insig. | 45 | 30 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS12370 | | response regulator transcription factor | insig. | 45 | 30 |
| Rhodopseudomonas palustris CGA009 | TX73_006410 | | response regulator transcription factor | insig. | 43 | 29 |
| Synechococcus elongatus PCC 7942 | Synpcc7942_0095 | rpaA | two component transcriptional regulator, winged helix family | strong | 42 | 30 |
| Synechocystis sp000284455 PCC 6803 | SGL_RS03815 | | hybrid sensor histidine kinase/response regulator | insig. | 40 | 33 |
| Marinobacter adhaerens HP15 | HP15_1054 | | multi-sensor signal transduction histidine kinase | strong | 36 | 36 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS06810 | | response regulator | insig. | 39 | 32 |