| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Azospirillum sp. SherDot2 | MPMX19_01135 | | putative methyltransferase YcgJ | insig. | 100 | 100 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS21750 | | S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB | insig. | 77 | 99 |
| o | Pseudomonas sp. DMC3 | GFF787 | | putative methyltransferase YcgJ | cofit | 55 | 99 |
| o | Pseudomonas putida KT2440 | PP_1987 | | Methlytransferase, UbiE/COQ5 family | insig. | 55 | 99 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_13 | | SAM-dependent methyltransferase YafE (UbiE paralog) | sig. | 53 | 99 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3946 | | SAM-dependent methyltransferase YafE (UbiE paralog) | sig. | 53 | 99 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_65 | | SAM-dependent methyltransferase YafE (UbiE paralog) | sig. | 55 | 99 |
| o | Xanthobacter sp. DMC5 | GFF2247 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 57 | 98 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_21410 | | SAM-dependent methyltransferase | cofit | 53 | 99 |
| o | Pseudomonas sp. BP01 | JOY50_RS16620 | | class I SAM-dependent methyltransferase | insig. | 54 | 99 |
| o | Pseudomonas sp. RS175 | PFR28_02822 | | putative methyltransferase YcgJ | insig. | 54 | 99 |
| o | Dickeya dadantii 3937 | DDA3937_RS10700 | | class I SAM-dependent methyltransferase | insig. | 53 | 96 |
| o | Pseudomonas sp. SVBP6 | COO64_RS05655 | | class I SAM-dependent methyltransferase | insig. | 52 | 98 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03946 | | putative methyltransferase YcgJ | cofit | 52 | 99 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_20630 | | SAM-dependent methyltransferase | cofit | 53 | 99 |
| o | Pseudomonas simiae WCS417 | PS417_18590 | | SAM-dependent methyltransferase | sig. | 51 | 99 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS01330 | | class I SAM-dependent methyltransferase | sig. | 55 | 96 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS34225 | | class I SAM-dependent methyltransferase | sig. | 55 | 96 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_15870 | | SAM-dependent methyltransferase | sig. | 55 | 96 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS20570 | | class I SAM-dependent methyltransferase | insig. | 51 | 99 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS20570 | | class I SAM-dependent methyltransferase | strong | 51 | 99 |
| o | Enterobacter sp. TBS_079 | MPMX20_00895 | | putative methyltransferase YcgJ | insig. | 51 | 98 |
| o | Magnetospirillum magneticum AMB-1 | AMB_RS01600 | | class I SAM-dependent methyltransferase | cofit | 52 | 98 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_13680 | | SAM-dependent methyltransferase | insig. | 51 | 98 |
| o | Pseudomonas orientalis W4I3 | QF045_RS20730 | | class I SAM-dependent methyltransferase | cofit | 51 | 99 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_2684 | | Methyltransferase domain | insig. | 51 | 98 |
| o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1052.1 | | hypothetical protein | insig. | 52 | 96 |
| o | Klebsiella michiganensis M5al | BWI76_RS05430 | | UbiE/COQ5 family methyltransferase | sig. | 49 | 98 |
| o | Pseudomonas segetis P6 | ACVTMO_RS15220 | | class I SAM-dependent methyltransferase | insig. | 52 | 98 |
| o | Serratia liquefaciens MT49 | IAI46_04605 | | class I SAM-dependent methyltransferase | insig. | 50 | 98 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4042 | | SAM-dependent methyltransferase YafE (UbiE paralog) | insig. | 50 | 98 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS24960 | | class I SAM-dependent methyltransferase | insig. | 52 | 97 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS08170 | | S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB | insig. | 51 | 98 |
| o | Escherichia coli ECOR38 | HEPCGN_07930 | ubiE | SAM-dependent methyltransferase | insig. | 48 | 98 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS04660 | | SAM-dependent methyltransferase | insig. | 49 | 98 |
| o | Escherichia fergusonii Becca | EFB2_03833 | | putative methyltransferase YcgJ | insig. | 46 | 98 |
| o | Escherichia coli ECOR27 | NOLOHH_02335 | ubiE | SAM-dependent methyltransferase | insig. | 47 | 98 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03451 | | putative methyltransferase YcgJ | insig. | 47 | 98 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS05220 | | S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB | insig. | 49 | 97 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS17180 | | class I SAM-dependent methyltransferase | sig. | 53 | 97 |
| o | Escherichia coli ECRC62 | BNILDI_09335 | ubiE | SAM-dependent methyltransferase | insig. | 47 | 98 |
| o | Escherichia coli ECRC100 | OKFHMN_09990 | ubiE | SAM-dependent methyltransferase | insig. | 46 | 98 |
| o | Escherichia coli ECRC101 | MCAODC_00505 | ubiE | SAM-dependent methyltransferase | insig. | 46 | 98 |
| o | Escherichia coli ECRC102 | NIAGMN_07840 | ubiE | SAM-dependent methyltransferase | insig. | 46 | 98 |
| o | Escherichia coli ECRC98 | JDDGAC_13585 | ubiE | SAM-dependent methyltransferase | insig. | 46 | 98 |
| o | Escherichia coli ECRC99 | KEDOAH_18165 | ubiE | SAM-dependent methyltransferase | no data | 46 | 98 |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS01150 | | class I SAM-dependent methyltransferase | insig. | 46 | 98 |
| o | Rahnella sp. WP5 | EX31_RS21940 | | class I SAM-dependent methyltransferase | insig. | 46 | 98 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00196 | | Ubiquinone/menaquinone biosynthesis C-methylase UbiE | insig. | 48 | 97 |
| o | Paraburkholderia graminis OAS925 | ABIE53_001313 | | SAM-dependent methyltransferase | sig. | 48 | 97 |
| o | Acinetobacter baumannii LAC-4 | RR41_RS12620 | | class I SAM-dependent methyltransferase | insig. | 40 | 94 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS03430 | | SAM-dependent methyltransferase | insig. | 49 | 96 |
| | Escherichia coli BL21 | ECD_00203 | | putative S-adenosyl-L-methionine-dependent methyltransferase | sig. | 47 | 79 |
| | Escherichia coli BW25113 | b0210 | yafE | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | insig. | 47 | 79 |
| | Variovorax sp. SCN45 | GFF3185 | | SAM-dependent methyltransferase | insig. | 45 | 44 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS16515 | | methyltransferase domain-containing protein | insig. | 41 | 39 |
| | Rhizobium sp. OAE497 | ABIE40_RS25270 | | methyltransferase domain-containing protein | insig. | 37 | 60 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS21220 | | class I SAM-dependent methyltransferase | insig. | 41 | 39 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1408 | mapA | membrane-associated protein | insig. | 26 | 83 |
| | Shewanella oneidensis MR-1 | SO4199 | ubiE | ubiquinone/menaquinone biosynthesis methlytransferase UbiE (NCBI ptt file) | no data | 36 | 45 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS15935 | | class I SAM-dependent methyltransferase | insig. | 42 | 39 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_00450 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 35 | 41 |
| | Dechlorosoma suillum PS | Dsui_2055 | | methylase involved in ubiquinone/menaquinone biosynthesis | no data | 44 | 40 |
| | Dickeya dadantii 3937 | DDA3937_RS08520 | | malonyl-ACP O-methyltransferase BioC | insig. | 30 | 75 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS15120 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 33 | 41 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS15820 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 30 | 42 |
| | Erwinia amylovora T8 | OLJFJH_18650 | | Uncharacterized protein yafE | insig. | 36 | 35 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2579 | | transcriptional regulator, ArsR family (RefSeq) | no data | 30 | 75 |
| | Rhizobium sp. OAE497 | ABIE40_RS22315 | | methyltransferase domain-containing protein | insig. | 38 | 54 |
| | Variovorax sp. OAS795 | ABID97_RS28145 | | methyltransferase domain-containing protein | insig. | 46 | 39 |
| | Caulobacter crescentus NA1000 | CCNA_03595 | | S-adenosylmethionine-dependent methyltransferase | insig. | 40 | 41 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03595 | | S-adenosylmethionine-dependent methyltransferase | insig. | 40 | 41 |
| | Shewanella sp. ANA-3 | Shewana3_2463 | | methyltransferase type 11 (RefSeq) | insig. | 35 | 57 |
| | Shewanella sp. ANA-3 | Shewana3_3725 | | demethylmenaquinone methyltransferase (RefSeq) | no data | 35 | 43 |
| | Agrobacterium fabrum C58 | Atu0390 | | ubiquinone/menaquinone biosynthesis methyltransferase | insig. | 40 | 39 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS07135 | | methyltransferase | insig. | 31 | 66 |
| | Mycobacterium tuberculosis H37Rv | Rv1405c | | Putative methyltransferase | insig. | 40 | 37 |
| | Mycobacterium tuberculosis H37Rv | Rv3038c | | Conserved protein | no data | 35 | 55 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_05655 | | malonyl-[acyl-carrier protein] O-methyltransferase BioC | insig. | 32 | 54 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5339 | | 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) | no data | 36 | 42 |
| | Pectobacterium carotovorum WPP14 | HER17_RS20610 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 35 | 46 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS11145 | ubiE;go_function=methyltransferase | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 34 | 45 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_28210 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 34 | 45 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS50940 | ubiE;go_function=methyltransferase | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 34 | 45 |
| | Shewanella amazonensis SB2B | Sama_3202 | | ubiquinone/menaquinone biosynthesis methlytransferase UbiE (RefSeq) | no data | 34 | 45 |
| | Bosea sp. OAE506 | ABIE41_RS02030 | | class I SAM-dependent methyltransferase | insig. | 25 | 57 |
| | Dickeya dianthicola ME23 | DZA65_RS08690 | | methyltransferase domain-containing protein | insig. | 35 | 55 |
| | Pseudomonas sp. S08-1 | OH686_10145 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 35 | 46 |
| | Pseudomonas sp. SVBP6 | COO64_RS13150 | | class I SAM-dependent methyltransferase | insig. | 32 | 56 |
| | Xanthobacter sp. DMC5 | GFF4453 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 32 | 58 |
| | Pseudomonas simiae WCS417 | PS417_02055 | | methyltransferase | insig. | 29 | 65 |
| | Methanococcus maripaludis S2 | MMP_RS02635 | | class I SAM-dependent methyltransferase | insig. | 28 | 48 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3585 | | ubiquinone/menaquinone biosynthesis methyltransferases | no data | 35 | 40 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS02235 | | methyltransferase domain-containing protein | cofit | 35 | 75 |
| | Xanthobacter sp. DMC5 | GFF4148 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 34 | 59 |
| | Pseudomonas segetis P6 | ACVTMO_RS21115 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 34 | 45 |
| | Serratia liquefaciens MT49 | IAI46_01065 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 35 | 45 |
| | Pseudomonas putida KT2440 | PP_5011 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 34 | 45 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_00445 | | ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 32 | 46 |
| | Azospirillum sp. SherDot2 | MPMX19_02804 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 38 | 40 |