Homologs of LRK55_RS15305 from Rhodanobacter denitrificans MT42

GGDEF domain-containing protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter denitrificans MT42 LRK55_RS15305 GGDEF domain-containing protein insig. 100 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS15585 GGDEF domain-containing protein insig. 99 100
o Rhodanobacter sp. FW510-T8 OKGIIK_04295 Diguanylate cyclase insig. 86 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS19590 GGDEF domain-containing protein insig. 62 99
  Magnetospirillum magneticum AMB-1 AMB_RS23435 GGDEF domain-containing protein insig. 36 63
o Cupriavidus basilensis FW507-4G11 RR42_RS33280 diguanylate cyclase insig. 35 83
o Acidovorax sp. GW101-3H11 Ac3H11_1766 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 34 94
  Acidovorax sp. GW101-3H11 Ac3H11_1001 GGDEF/PAS/PAC-domain containing protein insig. 40 49
  Dechlorosoma suillum PS Dsui_3164 diguanylate cyclase (GGDEF) domain-containing protein cofit 36 59
  Acidovorax sp. GW101-3H11 Ac3H11_3582 diguanylate cyclase (GGDEF domain) insig. 44 46
  Desulfovibrio vulgaris Hildenborough JW710 DVU2570 pleD GGDEF domain/HAMP domain protein (TIGR) insig. 47 42
  Shewanella amazonensis SB2B Sama_2382 GGDEF family protein (RefSeq) insig. 44 42
  Acidovorax sp. GW101-3H11 Ac3H11_3345 hypothetical protein insig. 46 46
  Herbaspirillum seropedicae SmR1 HSERO_RS09550 diguanylate cyclase insig. 45 44
  Agrobacterium fabrum C58 Atu1257 GGDEF family protein insig. 39 45
  Shewanella oneidensis MR-1 SO4457 GGDEF domain protein (NCBI ptt file) insig. 40 45
  Desulfovibrio vulgaris Miyazaki F DvMF_1014 diguanylate cyclase (RefSeq) insig. 45 45
  Azospirillum sp. SherDot2 MPMX19_01660 Response regulator PleD insig. 43 43
  Pseudomonas sp. S08-1 OH686_21285 hypothetical protein cofit 43 43
  Burkholderia phytofirmans PsJN BPHYT_RS01080 hypothetical protein insig. 40 55
  Dechlorosoma suillum PS Dsui_0970 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 45 46
  Paraburkholderia graminis OAS925 ABIE53_004649 diguanylate cyclase (GGDEF)-like protein strong 45 43
  Serratia liquefaciens MT49 IAI46_05820 diguanylate cyclase insig. 44 42
  Pseudomonas sp. S08-1 OH686_03265 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 42 42
  Pseudomonas simiae WCS417 PS417_12810 diguanylate cyclase insig. 45 42
  Shewanella oneidensis MR-1 SO1480 GGDEF family protein (NCBI ptt file) insig. 42 43
  Rhizobium sp. OAE497 ABIE40_RS07085 GGDEF domain-containing protein insig. 37 59
  Shewanella sp. ANA-3 Shewana3_2946 diguanylate cyclase (RefSeq) cofit 43 42
  Pseudomonas fluorescens SBW25 PFLU_RS13490 sensor domain-containing diguanylate cyclase insig. 43 42
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13490 sensor domain-containing diguanylate cyclase insig. 43 42
  Cupriavidus basilensis FW507-4G11 RR42_RS25885 diguanylate cyclase insig. 37 59
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03607 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 44 43
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0187 diguanylate cyclase (GGDEF) domain insig. 41 46
  Serratia liquefaciens MT49 IAI46_12920 diguanylate cyclase insig. 41 42
  Azospirillum brasilense Sp245 AZOBR_RS06990 response regulator receiver modulated diguanylate cyclase insig. 35 65
  Rhodospirillum rubrum S1H Rru_A2567 Putative diguanylate cyclase (GGDEF domain) (NCBI) cofit 33 85
  Burkholderia phytofirmans PsJN BPHYT_RS28915 diguanylate cyclase insig. 40 53
  Rhodopseudomonas palustris CGA009 TX73_016195 PleD family two-component system response regulator insig. 45 41
  Pseudomonas putida KT2440 PP_0129 GGDEF domain protein sig. 46 42
  Marinobacter adhaerens HP15 HP15_3763 response regulator receiver domain protein (CheY) insig. 41 44
  Paraburkholderia sabiae LMG 24235 QEN71_RS16450 diguanylate cyclase insig. 43 46
  Cupriavidus basilensis FW507-4G11 RR42_RS34850 diguanylate cyclase insig. 43 44
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4756.1 FIG01211576: hypothetical protein insig. 46 41
  Agrobacterium fabrum C58 Atu2179 GGDEF family protein insig. 32 93
  Rhizobium sp. OAE497 ABIE40_RS07330 PleD family two-component system response regulator cofit 44 41
  Burkholderia phytofirmans PsJN BPHYT_RS34775 diguanylate cyclase insig. 43 43
  Shewanella loihica PV-4 Shew_3023 diguanylate cyclase (RefSeq) insig. 42 45
  Azospirillum sp. SherDot2 MPMX19_03993 hypothetical protein insig. 35 66
  Desulfovibrio vulgaris Miyazaki F DvMF_2758 diguanylate cyclase with PAS/PAC sensor (RefSeq) insig. 46 43
  Burkholderia phytofirmans PsJN BPHYT_RS27385 DeoR family transcriptional regulator insig. 44 42
  Sinorhizobium meliloti 1021 SMa2301 Diguanylate cyclase insig. 42 42
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16165 diguanylate cyclase insig. 41 52
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4180 FIG00955126: hypothetical protein insig. 40 45
o Castellaniella sp019104865 MT123 ABCV34_RS15095 GGDEF domain-containing protein insig. 33 88
  Pseudomonas fluorescens GW456-L13 PfGW456L13_492 Sensory box/GGDEF family protein insig. 39 44
  Acidovorax sp. GW101-3H11 Ac3H11_2280 diguanylate cyclase insig. 33 93
  Agrobacterium fabrum C58 Atu3061 diguanylate cyclase cofit 44 41
  Pseudomonas fluorescens GW456-L13 PfGW456L13_588 GGDEF domain protein insig. 42 46
  Rhodopseudomonas palustris CGA009 TX73_020695 diguanylate cyclase insig. 42 43
  Pseudomonas fluorescens FW300-N2E3 AO353_11520 diguanylate cyclase strong 38 47
  Enterobacter asburiae PDN3 EX28DRAFT_0598 diguanylate cyclase (GGDEF) domain insig. 42 41
  Azospirillum sp. SherDot2 MPMX19_04554 Response regulator PleD sig. 41 42
  Lysobacter sp. OAE881 ABIE51_RS14420 sensor domain-containing diguanylate cyclase insig. 43 47
  Enterobacter sp. TBS_079 MPMX20_02952 putative diguanylate cyclase DgcQ insig. 41 42
  Azospirillum brasilense Sp245 AZOBR_RS15555 transcriptional regulator insig. 43 43
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS07895 GGDEF domain-containing protein cofit 40 43
  Ralstonia solanacearum UW163 UW163_RS05730 GGDEF domain-containing protein insig. 40 43
  Sinorhizobium meliloti 1021 SMc01464 hypothetical protein insig. 38 53
  Pseudomonas fluorescens FW300-N2E3 AO353_10960 hypothetical protein insig. 44 46
  Herbaspirillum seropedicae SmR1 HSERO_RS23180 membrane protein sig. 43 50
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1029 Putative membrane protein insig. 42 45
  Shewanella sp. ANA-3 Shewana3_0269 diguanylate cyclase (RefSeq) cofit 37 52
  Desulfovibrio vulgaris Miyazaki F DvMF_2637 diguanylate cyclase with extracellular sensor (RefSeq) insig. 43 44
  Rhodanobacter sp. FW510-T8 OKGIIK_13465 gGDEF GGDEF domain-containing protein insig. 40 48
  Pseudomonas sp. RS175 PFR28_04630 hypothetical protein insig. 45 42
  Desulfovibrio vulgaris Miyazaki F DvMF_1537 diguanylate cyclase (RefSeq) insig. 44 43
  Rhodanobacter denitrificans MT42 LRK55_RS15215 GGDEF domain-containing protein insig. 42 43
  Rhodospirillum rubrum S1H Rru_A3374 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) insig. 42 44
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1881 GGDEF domain protein insig. 45 42
  Cupriavidus basilensis FW507-4G11 RR42_RS01480 hypothetical protein insig. 44 46
  Dechlorosoma suillum PS Dsui_3004 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 44 42
  Rhodospirillum rubrum S1H Rru_A3391 Putative diguanylate cyclase (GGDEF domain) (NCBI) insig. 44 42
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS16665 GGDEF domain-containing protein insig. 44 42
  Ralstonia solanacearum UW163 UW163_RS18020 GGDEF domain-containing protein insig. 44 42
  Desulfovibrio vulgaris Miyazaki F DvMF_1477 diguanylate cyclase with PAS/PAC sensor (RefSeq) sig. 43 42
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15495 GGDEF domain-containing protein insig. 42 43
  Marinobacter adhaerens HP15 HP15_850 GGDEF domain protein insig. 42 49
  Pseudomonas putida KT2440 PP_3932 Diguanylate cyclase insig. 41 41
  Azospirillum sp. SherDot2 MPMX19_04876 hypothetical protein insig. 41 44
  Herbaspirillum seropedicae SmR1 HSERO_RS11275 membrane protein insig. 35 59
  Acidovorax sp. GW101-3H11 Ac3H11_859 GAF domain/sensory box/EAL domain protein insig. 43 42
  Marinobacter adhaerens HP15 HP15_4052 response regulator insig. 43 41
  Pseudomonas sp. RS175 PFR28_03457 hypothetical protein sig. 42 42
  Ralstonia sp. UNC404CL21Col ABZR87_RS03580 sensor domain-containing diguanylate cyclase insig. 42 43
  Bosea sp. OAE506 ABIE41_RS02130 GGDEF domain-containing protein insig. 41 42
  Enterobacter sp. TBS_079 MPMX20_00664 hypothetical protein insig. 41 46
  Shewanella oneidensis MR-1 SO2174 cyclic nucleotide phosphodiesterase, putative (NCBI ptt file) insig. 39 43
  Rhodanobacter denitrificans MT42 LRK55_RS15570 GGDEF domain-containing protein cofit 38 46
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15815 GGDEF domain-containing protein cofit 38 46
  Castellaniella sp019104865 MT123 ABCV34_RS10105 GGDEF domain-containing protein insig. 37 48