Homologs of HMPREF1078_RS15700 from Parabacteroides merdae CL09T00C40

efflux RND transporter permease subunit
SEED: putative cation efflux transporter
KEGG: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15700 efflux RND transporter permease subunit insig. 100 100
o Bacteroides stercoris CC31F HMPREF1181_RS00320 efflux RND transporter permease subunit cofit 66 99
o Bacteroides thetaiotaomicron VPI-5482 BT2686 putative cation efflux transporter (NCBI ptt file) strong 65 99
o Bacteroides ovatus ATCC 8483 BACOVA_00987 heavy metal efflux pump, CzcA family insig. 65 99
o Phocaeicola dorei CL03T12C01 ABI39_RS01255 efflux RND transporter permease subunit cofit 64 99
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02070 efflux RND transporter permease subunit cofit 64 99
o Azospirillum brasilense Sp245 AZOBR_RS14655 nodulation protein NolG strong 33 99
o Azospirillum sp. SherDot2 MPMX19_00826 Multidrug resistance protein MdtB insig. 33 99
o Acidovorax sp. GW101-3H11 Ac3H11_2222 RND multidrug efflux transporter; Acriflavin resistance protein insig. 30 99
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24180 acriflavin resistance protein strong 31 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00110 hydrophobic/amphiphilic exporter-1, HAE1 family insig. 30 96
o Shewanella loihica PV-4 Shew_1648 acriflavin resistance protein (RefSeq) strong 33 98
o Cupriavidus basilensis FW507-4G11 RR42_RS15655 nodulation protein NolG insig. 31 97
o Shewanella amazonensis SB2B Sama_1420 AcrB/AcrD/AcrF family protein (RefSeq) insig. 33 98
o Sinorhizobium meliloti 1021 SMa0875 NolG efflux transporter insig. 31 99
o Acinetobacter radioresistens SK82 MPMX26_02516 Multidrug resistance protein MdtC insig. 31 98
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03175 acriflavin resistance protein cofit 30 100
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1551 Cation/multidrug efflux pump cofit 30 98
o Shewanella sp. ANA-3 Shewana3_1703 acriflavin resistance protein (RefSeq) insig. 33 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5762 RND multidrug efflux transporter; Acriflavin resistance protein insig. 29 97
o Shewanella oneidensis MR-1 SO1924 AcrB/AcrD/AcrF family protein (NCBI ptt file) insig. 32 100
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05470 efflux RND transporter permease subunit insig. 29 99
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4261 RND multidrug efflux transporter; Acriflavin resistance protein insig. 30 99
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0681 Cation/multidrug efflux pump cofit 30 99
  Marinobacter adhaerens HP15 HP15_3693 multidrug resistance protein insig. 30 100
  Acidovorax sp. GW101-3H11 Ac3H11_482 RND multidrug efflux transporter; Acriflavin resistance protein insig. 30 98
o Alteromonas macleodii MIT1002 MIT1002_02302 Cation efflux system protein CzcA cofit 32 98
o Agrobacterium fabrum C58 Atu4636 AcrB/AcrD/AcrF family protein insig. 31 99
  Azospirillum sp. SherDot2 MPMX19_04343 Efflux pump membrane transporter BepE insig. 31 98
  Bacteroides ovatus ATCC 8483 BACOVA_03090 RND transporter, HAE1 family insig. 28 99
  Phocaeicola dorei CL03T12C01 ABI39_RS09435 efflux RND transporter permease subunit insig. 29 98
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13825 efflux RND transporter permease subunit insig. 29 98
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_13040 acriflavin resistance protein insig. 31 98
  Bacteroides stercoris CC31F HMPREF1181_RS09455 efflux RND transporter permease subunit insig. 29 98
  Pseudomonas sp. S08-1 OH686_22670 RND efflux system, inner membrane transporter cofit 28 98
  Serratia liquefaciens MT49 IAI46_18980 multidrug efflux RND transporter permease subunit MdtC insig. 29 99
  Vibrio cholerae E7946 ATCC 55056 CSW01_04695 AcrB/AcrD/AcrF family protein insig. 30 98
  Ralstonia solanacearum GMI1000 RS_RS22920 nodulation protein insig. 29 98
  Dechlorosoma suillum PS Dsui_1555 cation/multidrug efflux pump cofit 29 100
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18115 nodulation protein insig. 29 98
  Ralstonia solanacearum UW163 UW163_RS21015 nodulation protein insig. 29 98
o Lysobacter sp. OAE881 ABIE51_RS09290 efflux RND transporter permease subunit insig. 30 98
  Magnetospirillum magneticum AMB-1 AMB_RS17365 acriflavine resistance protein B strong 29 98
  Azospirillum brasilense Sp245 AZOBR_RS22130 acriflavin resistance protein insig. 30 98
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4424 Cation/multidrug efflux pump strong 30 99
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS19050 efflux RND transporter permease subunit insig. 29 98
  Ralstonia solanacearum PSI07 RPSI07_RS05520 nodulation protein insig. 29 98
  Bacteroides thetaiotaomicron VPI-5482 BT2252 multidrug efflux membrane fusion protein (NCBI ptt file) insig. 29 98
  Pectobacterium carotovorum WPP14 HER17_RS06315 multidrug efflux RND transporter permease subunit MdtC cofit 29 100
  Shewanella sp. ANA-3 Shewana3_2346 acriflavin resistance protein (RefSeq) insig. 30 97
  Rhodanobacter sp. FW510-T8 OKGIIK_11990 acrB acriflavine resistance protein B cofit 28 99
  Ralstonia sp. UNC404CL21Col ABZR87_RS19020 multidrug efflux RND transporter permease subunit strong 29 98
  Dickeya dianthicola 67-19 HGI48_RS15350 multidrug efflux RND transporter permease subunit MdtC insig. 29 99
  Enterobacter asburiae PDN3 EX28DRAFT_0482 Cation/multidrug efflux pump insig. 29 99
  Dickeya dianthicola ME23 DZA65_RS16170 multidrug efflux RND transporter permease subunit MdtC cofit 29 99
  Dickeya dadantii 3937 DDA3937_RS15270 multidrug efflux RND transporter permease subunit MdtC cofit 29 99
  Enterobacter sp. TBS_079 MPMX20_03062 Multidrug resistance protein MdtC insig. 29 99
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11745 efflux RND transporter permease subunit insig. 28 98
  Shewanella loihica PV-4 Shew_1852 acriflavin resistance protein (RefSeq) strong 30 98
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17650 acriflavin resistance protein insig. 28 98
  Escherichia coli Nissle 1917 ECOLIN_RS12205 multidrug efflux RND transporter permease subunit MdtC no data 30 100
o Fusobacterium nucleatum SB010 HUW76_03875 efflux RND transporter permease subunit strong 28 98
  Shewanella sp. ANA-3 Shewana3_1659 acriflavin resistance protein (RefSeq) insig. 29 98
  Rhodospirillum rubrum S1H Rru_A2094 Acriflavin resistance protein (NCBI) insig. 29 98
  Escherichia fergusonii Becca EFB2_01779 Multidrug resistance protein MdtC insig. 30 100
  Shewanella oneidensis MR-1 SO1882 AcrB/AcrD/AcrF family protein (NCBI ptt file) insig. 29 98
  Castellaniella sp019104865 MT123 ABCV34_RS14625 efflux RND transporter permease subunit insig. 29 98
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16320 efflux RND transporter permease subunit strong 28 97
o Variovorax sp. SCN45 GFF522 RND efflux system, inner membrane transporter insig. 29 99
  Shewanella amazonensis SB2B Sama_1905 AcrB/AcrD/AcrF family protein (RefSeq) strong 28 98
o Synechocystis sp000284455 PCC 6803 SGL_RS12200 efflux RND transporter permease subunit cofit 29 98
  Escherichia coli BL21 ECD_01981 multidrug efflux system, subunit C insig. 30 99
  Escherichia coli ECRC62 BNILDI_14450 mdtC multidrug efflux RND transporter permease subunit MdtC cofit 30 99
o Variovorax sp. OAS795 ABID97_RS17720 efflux RND transporter permease subunit insig. 29 99
  Pantoea sp. MT58 IAI47_06865 multidrug efflux RND transporter permease subunit MdtC insig. 28 99
  Escherichia coli ECRC100 OKFHMN_24190 mdtC multidrug efflux RND transporter permease subunit MdtC cofit 30 99
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01628 Multidrug resistance protein MdtC insig. 30 99
  Escherichia coli ECRC101 MCAODC_20750 mdtC multidrug efflux RND transporter permease subunit MdtC insig. 29 99
  Escherichia coli ECRC102 NIAGMN_22135 mdtC multidrug efflux RND transporter permease subunit MdtC insig. 29 99
  Escherichia coli ECRC98 JDDGAC_28300 mdtC multidrug efflux RND transporter permease subunit MdtC insig. 29 99
  Escherichia coli ECRC99 KEDOAH_03960 mdtC multidrug efflux RND transporter permease subunit MdtC no data 29 99
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS02595 efflux RND transporter permease subunit strong 27 99
  Escherichia coli BW25113 b2076 mdtC multidrug efflux system, subunit C (NCBI) sig. 29 99
  Escherichia coli ECOR38 HEPCGN_02880 mdtC multidrug efflux RND transporter permease subunit MdtC insig. 29 99
  Lysobacter sp. OAE881 ABIE51_RS16985 efflux RND transporter permease subunit insig. 29 98
  Pseudomonas sp. S08-1 OH686_00930 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtC (RND type) cofit 28 98
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11905 efflux RND transporter permease subunit strong 28 98
  Escherichia coli ECOR27 NOLOHH_15535 mdtC multidrug efflux RND transporter permease subunit MdtC cofit 30 99
  Desulfovibrio vulgaris Hildenborough JW710 DVU0438 AcrB/AcrD/AcrF family protein (TIGR) strong 28 99
o Methylophilus sp. DMC18 GFF2200 Multidrug resistance protein MdtC insig. 29 98
  Shewanella loihica PV-4 Shew_1178 acriflavin resistance protein (RefSeq) insig. 29 98
  Rhodanobacter denitrificans MT42 LRK55_RS09505 efflux RND transporter permease subunit strong 27 97
  Herbaspirillum seropedicae SmR1 HSERO_RS07655 nodulation protein insig. 28 99
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09845 efflux RND transporter permease subunit strong 27 99
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3853 Multidrug transporter MdtC insig. 30 99
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1262.1 RND multidrug efflux transporter; Acriflavin resistance protein insig. 29 98
  Bacteroides thetaiotaomicron VPI-5482 BT0299 cation efflux system (AcrB/AcrD/AcrF family) (NCBI ptt file) insig. 30 99
  Sinorhizobium meliloti 1021 SMc01457 transport transmembrane protein strong 28 97
  Shewanella oneidensis MR-1 SO3484 AcrB/AcrD/AcrF family protein (NCBI ptt file) sig. 28 98
  Rhodanobacter denitrificans MT42 LRK55_RS11630 efflux RND transporter permease subunit cofit 28 98