Homologs of HER17_RS18145 from Pectobacterium carotovorum WPP14

GIY-YIG nuclease family protein
SEED: FIG137864: putative endonuclease containing a URI domain
KEGG: putative endonuclease

74 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Pectobacterium carotovorum WPP14 HER17_RS18145 GIY-YIG nuclease family protein cofit 100 100
o Dickeya dianthicola 67-19 HGI48_RS03305 GIY-YIG nuclease family protein insig. 76 86
o Dickeya dianthicola ME23 DZA65_RS03300 GIY-YIG nuclease family protein insig. 72 88
  Dickeya dadantii 3937 DDA3937_RS03130 GIY-YIG nuclease family protein insig. 68 92
o Serratia liquefaciens MT49 IAI46_02030 GIY-YIG nuclease family protein insig. 74 86
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1513 FIG137864: putative endonuclease containing a URI domain insig. 71 85
o Rahnella sp. WP5 EX31_RS08465 GIY-YIG nuclease family protein insig. 64 92
o Escherichia coli BW25113 b3155 yhbQ hypothetical protein (NCBI) insig. 70 81
  Enterobacter asburiae PDN3 EX28DRAFT_3204 Predicted endonuclease containing a URI domain insig. 76 77
o Escherichia coli ECOR27 NOLOHH_09990 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 70 81
  Enterobacter sp. TBS_079 MPMX20_04059 hypothetical protein insig. 75 77
o Escherichia coli ECRC62 BNILDI_01540 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 69 81
o Escherichia coli BL21 ECD_03022 GIY-YIG nuclease superfamily protein insig. 69 81
o Escherichia fergusonii Becca EFB2_00668 hypothetical protein insig. 69 81
o Escherichia coli ECOR38 HEPCGN_17065 yhbQ DNA damage response exodeoxyribonuclease YhbQ cofit 69 81
o Escherichia coli ECRC101 OKFHMN_18190 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 69 81
o Escherichia coli ECRC101 MCAODC_08710 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 69 81
o Escherichia coli ECRC102 NIAGMN_15950 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 69 81
o Escherichia coli ECRC98 JDDGAC_21815 yhbQ DNA damage response exodeoxyribonuclease YhbQ no data 69 81
o Escherichia coli ECRC99 KEDOAH_09960 yhbQ DNA damage response exodeoxyribonuclease YhbQ no data 69 81
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00545 hypothetical protein insig. 69 81
o Escherichia coli Nissle 1917 ECOLIN_RS18125 DNA damage response exodeoxyribonuclease YhbQ insig. 69 81
o Erwinia tracheiphila SCR3 LU632_RS20990 GIY-YIG nuclease family protein insig. 62 93
o Pantoea sp. MT58 IAI47_16950 GIY-YIG nuclease family protein insig. 63 85
  Klebsiella michiganensis M5al BWI76_RS24955 hypothetical protein insig. 71 77
  Vibrio cholerae E7946 ATCC 55056 CSW01_17870 GIY-YIG nuclease family protein insig. 65 80
  Shewanella sp. ANA-3 Shewana3_0136 excinuclease ABC subunit C (RefSeq) insig. 57 81
  Marinobacter adhaerens HP15 HP15_2558 putative nuclease insig. 56 76
  Shewanella amazonensis SB2B Sama_0145 endonuclease (RefSeq) insig. 53 79
  Shewanella oneidensis MR-1 SO0145 hypothetical URI domain endonuclease (NCBI ptt file) insig. 50 87
  Shewanella loihica PV-4 Shew_0038 excinuclease ABC subunit C (RefSeq) insig. 56 78
  Kangiella aquimarina DSM 16071 B158DRAFT_1379 Predicted endonuclease containing a URI domain insig. 47 77
  Desulfovibrio vulgaris Hildenborough JW710 DVU3309 endo/excinuclease amino terminal domain protein (TIGR) sig. 40 82
o Pseudomonas fluorescens FW300-N2E3 AO353_04580 GIY-YIG nuclease insig. 39 94
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1705 FIG00955494: hypothetical protein insig. 41 83
  Lysobacter sp. OAE881 ABIE51_RS14940 GIY-YIG nuclease family protein insig. 45 78
  Alteromonas macleodii MIT1002 MIT1002_02877 GIY-YIG nuclease superfamily protein insig. 46 78
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_908 FIG00955494: hypothetical protein no data 40 86
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5411 FIG00955494: hypothetical protein insig. 39 85
  Pseudomonas stutzeri RCH2 Psest_1218 Predicted endonuclease containing a URI domain insig. 42 77
  Desulfovibrio vulgaris Miyazaki F DvMF_2126 Excinuclease ABC C subunit domain protein (RefSeq) insig. 40 81
  Paraburkholderia sabiae LMG 24235 QEN71_RS24905 GIY-YIG nuclease family protein insig. 41 76
o Pseudomonas fluorescens SBW25 PFLU_RS05060 GIY-YIG nuclease family protein insig. 38 86
o Pseudomonas fluorescens SBW25-INTG PFLU_RS05060 GIY-YIG nuclease family protein insig. 38 86
  Pseudomonas fluorescens FW300-N2C3 AO356_17425 GIY-YIG nuclease insig. 41 80
o Pseudomonas simiae WCS417 PS417_04990 GIY-YIG nuclease insig. 36 86
  Pseudomonas sp. RS175 PFR28_03536 hypothetical protein insig. 41 77
  Paraburkholderia graminis OAS925 ABIE53_001343 putative endonuclease sig. 38 77
  Pseudomonas syringae pv. syringae B728a Psyr_1080 Excinuclease ABC, C subunit, N-terminal insig. 37 85
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1080 Excinuclease ABC, C subunit, N-terminal insig. 37 85
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00216 putative endonuclease no data 37 77
  Burkholderia phytofirmans PsJN BPHYT_RS05470 excinuclease ABC subunit C insig. 37 77
  Pseudomonas putida KT2440 PP_0972 UPF0213 protein PP_0972 insig. 39 77
o Dechlorosoma suillum PS Dsui_2028 putative endonuclease containing a URI domain no data 41 83
o Pseudomonas sp. S08-1 OH686_17835 Endo/excinuclease domain protein insig. 42 86
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00190 GIY-YIG nuclease family protein insig. 38 77
  Magnetospirillum magneticum AMB-1 AMB_RS20825 excinuclease ABC subunit C insig. 34 80
  Rhodanobacter sp. FW510-T8 OKGIIK_11815 GIY-YIG domain-containing protein insig. 38 73
  Rhodanobacter denitrificans MT42 LRK55_RS11850 GIY-YIG nuclease family protein insig. 38 73
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12115 GIY-YIG nuclease family protein insig. 38 73
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1380.1 COG2827: putative endonuclease containing a URI domain insig. 34 80
  Variovorax sp. OAS795 ABID97_RS06665 GIY-YIG nuclease family protein insig. 36 73
  Magnetospirillum magneticum AMB-1 AMB_RS11455 GIY-YIG nuclease family protein cofit 41 67
  Cupriavidus basilensis FW507-4G11 RR42_RS36170 hypothetical protein insig. 43 49
  Rhodanobacter sp. FW510-T8 OKGIIK_00785 GIY-YIG nuclease family protein insig. 34 74
  Acidovorax sp. GW101-3H11 Ac3H11_2277 putative periplasmic protein kinase ArgK and related GTPases of G3E family sig. 40 77
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1064 Predicted endonuclease containing a URI domain insig. 35 76
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00620 GIY-YIG nuclease family protein insig. 28 81
  Fusobacterium nucleatum SB010 HUW76_09640 GIY-YIG nuclease family protein cofit 40 62
  Rhodopseudomonas palustris CGA009 TX73_018790 GIY-YIG nuclease family protein insig. 32 76
  Bosea sp. OAE506 ABIE41_RS17150 GIY-YIG nuclease family protein insig. 31 77
  Bosea sp. OAE506 ABIE41_RS22145 GIY-YIG nuclease family protein insig. 28 78
  Kangiella aquimarina DSM 16071 B158DRAFT_0797 Predicted endonuclease containing a URI domain insig. 30 81
  Rhodopseudomonas palustris CGA009 TX73_019185 GIY-YIG nuclease family protein insig. 30 79