Homologs of Ga0059261_1749 from Sphingomonas koreensis DSMZ 15582

Site-specific recombinase XerD
SEED: phage integrase family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1244 Site-specific recombinase XerD no data 100 100
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1749 Site-specific recombinase XerD no data 100 100
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1789 Site-specific recombinase XerD no data 100 100
  Burkholderia phytofirmans PsJN BPHYT_RS05275 integrase no data 59 94
  Burkholderia phytofirmans PsJN BPHYT_RS32945 integrase no data 59 94
  Paraburkholderia graminis OAS925 ABIE53_001488 site-specific recombinase XerD sig. 58 96
  Dinoroseobacter shibae DFL-12 Dshi_3629 integrase family protein (RefSeq) no data 52 93
  Dinoroseobacter shibae DFL-12 Dshi_3661 integrase family protein (RefSeq) no data 52 93
  Dinoroseobacter shibae DFL-12 Dshi_3700 integrase family protein (RefSeq) insig. 50 93
  Bosea sp. OAE506 ABIE41_RS00515 tyrosine-type recombinase/integrase insig. 52 95
  Magnetospirillum magneticum AMB-1 AMB_RS04775 integrase insig. 48 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS44560 site-specific integrase no data 42 93
  Paraburkholderia sabiae LMG 24235 QEN71_RS39850 site-specific integrase no data 42 93
  Paraburkholderia sabiae LMG 24235 QEN71_RS42300 site-specific integrase no data 42 93
  Paraburkholderia sabiae LMG 24235 QEN71_RS42900 site-specific integrase no data 42 93
  Paraburkholderia sabiae LMG 24235 QEN71_RS42770 site-specific integrase insig. 42 93
  Paraburkholderia sabiae LMG 24235 QEN71_RS44370 site-specific integrase insig. 40 93
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09695 integrase strong 36 90
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3270 Site-specific recombinase XerD insig. 35 90
  Bacteroides stercoris CC31F HMPREF1181_RS09900 site-specific integrase insig. 34 89
  Phocaeicola dorei CL03T12C01 ABI39_RS16135 site-specific integrase insig. 31 94
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS08890 site-specific integrase insig. 33 88
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS04935 site-specific integrase sig. 34 89
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2780 Phage integrase family no data 100 22
  Vibrio cholerae E7946 ATCC 55056 CSW01_15405 integron integrase insig. 33 89
  Klebsiella michiganensis M5al BWI76_RS23815 site-specific tyrosine recombinase XerD no data 34 86
  Alteromonas macleodii MIT1002 MIT1002_00573 Tyrosine recombinase XerD insig. 33 91
  Shewanella oneidensis MR-1 SO2036 site-specific recombinase, phage integrase family (NCBI ptt file) no data 30 87
  Shewanella oneidensis MR-1 SO2528 site-specific recombinase, phage integrase family (NCBI ptt file) no data 30 87
  Shewanella oneidensis MR-1 SO2164 site-specific recombinase, phage integrase family (NCBI ptt file) no data 30 87
  Shewanella oneidensis MR-1 SO2211 site-specific recombinase, phage integrase family (NCBI ptt file) no data 30 87
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2991 Tyrosine recombinase XerD cofit 33 86
  Rhodanobacter denitrificans MT42 LRK55_RS08605 integron integrase insig. 34 94
  Rhodanobacter sp. FW510-T8 OKGIIK_15560 Integrase insig. 33 94
  Azospirillum brasilense Sp245 AZOBR_RS03240 recombinase XerD insig. 34 84
  Pseudomonas sp. S08-1 OH686_18870 Integron integrase IntIPac insig. 33 90
  Pseudomonas sp. S08-1 OH686_17750 tyrosine recombinase XerD insig. 33 86
  Escherichia coli ECRC102 NIAGMN_17335 xerD site-specific tyrosine recombinase XerD no data 31 86
  Shewanella oneidensis MR-1 SO2037 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 30 93
  Dickeya dadantii 3937 DDA3937_RS03300 site-specific tyrosine recombinase XerD insig. 32 86
  Escherichia coli BL21 ECD_02726 site-specific tyrosine recombinase strong 31 86
  Escherichia fergusonii Becca EFB2_01007 Tyrosine recombinase XerD strong 31 86
  Escherichia coli ECOR27 NOLOHH_11495 xerD site-specific tyrosine recombinase XerD no data 31 86
  Escherichia coli ECRC101 OKFHMN_19570 xerD site-specific tyrosine recombinase XerD no data 31 86
  Escherichia coli ECRC101 MCAODC_10090 xerD site-specific tyrosine recombinase XerD no data 31 86
  Escherichia coli ECRC62 BNILDI_10025 xerD site-specific tyrosine recombinase XerD insig. 31 86
  Escherichia coli ECRC98 JDDGAC_23210 xerD site-specific tyrosine recombinase XerD no data 31 86
  Escherichia coli ECRC99 KEDOAH_08570 xerD site-specific tyrosine recombinase XerD no data 31 86
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00821 Tyrosine recombinase XerD sig. 31 86
  Escherichia coli Nissle 1917 ECOLIN_RS16125 site-specific tyrosine recombinase XerD cofit 31 86
  Escherichia coli BW25113 b2894 xerD site-specific tyrosine recombinase XerD (NCBI) strong 31 86
  Pantoea sp. MT58 IAI47_03820 site-specific tyrosine recombinase XerD strong 31 90
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.449.1 Integrase insig. 36 95
  Enterobacter sp. TBS_079 MPMX20_03753 Tyrosine recombinase XerD strong 32 86
  Escherichia coli ECOR38 HEPCGN_18860 xerD site-specific tyrosine recombinase XerD cofit 31 86
  Kangiella aquimarina DSM 16071 B158DRAFT_0342 integron integrase insig. 28 93
  Castellaniella sp019104865 MT123 ABCV34_RS00515 site-specific tyrosine recombinase XerD insig. 35 83
  Shewanella amazonensis SB2B Sama_1355 phage integrase family site specific recombinase (RefSeq) insig. 30 93
  Dickeya dianthicola 67-19 HGI48_RS03440 site-specific tyrosine recombinase XerD insig. 32 85
  Dickeya dianthicola ME23 DZA65_RS03485 site-specific tyrosine recombinase XerD no data 32 85
  Rahnella sp. WP5 EX31_RS13480 site-specific tyrosine recombinase XerD strong 31 85
  Marinobacter adhaerens HP15 HP15_762 site-specific tyrosine recombinase XerD insig. 32 85
  Pectobacterium carotovorum WPP14 HER17_RS17890 site-specific tyrosine recombinase XerD strong 32 86
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04705 site-specific tyrosine recombinase XerD sig. 29 83
  Enterobacter asburiae PDN3 EX28DRAFT_2945 tyrosine recombinase XerD insig. 32 86
  Caulobacter crescentus NA1000 CCNA_03101 site-specific tyrosine recombinase XerD strong 33 84
  Caulobacter crescentus NA1000 Δfur CCNA_03101 site-specific tyrosine recombinase XerD cofit 33 84
  Herbaspirillum seropedicae SmR1 HSERO_RS04265 tyrosine recombinase XerD insig. 32 85
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04165 site-specific tyrosine recombinase XerD no data 35 86
  Shewanella loihica PV-4 Shew_0770 tyrosine recombinase XerD (RefSeq) strong 32 88
  Acinetobacter radioresistens SK82 MPMX26_00169 Tyrosine recombinase XerD no data 31 88
  Serratia liquefaciens MT49 IAI46_20730 site-specific tyrosine recombinase XerD insig. 31 86
  Bacteroides stercoris CC31F HMPREF1181_RS01250 site-specific tyrosine recombinase XerD insig. 29 86
  Magnetospirillum magneticum AMB-1 AMB_RS19880 site-specific tyrosine recombinase XerD cofit 37 86
  Phaeobacter inhibens DSM 17395 PGA1_c14060 tyrosine recombinase XerD strong 31 88
  Bacteroides ovatus ATCC 8483 BACOVA_02123 tyrosine recombinase XerD insig. 28 86
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1809 tyrosine recombinase XerD insig. 29 87
  Erwinia tracheiphila SCR3 LU632_RS05975 xerD site-specific tyrosine recombinase XerD no data 30 86
  Ralstonia solanacearum GMI1000 RS_RS12755 tyrosine recombinase XerD no data 33 89
  Bacteroides thetaiotaomicron VPI-5482 BT2843 integrase (NCBI ptt file) strong 27 86
  Shewanella amazonensis SB2B Sama_3247 integrase/recombinase XerC (RefSeq) strong 32 84
  Mycobacterium tuberculosis H37Rv Rv1701 Probable integrase/recombinase sig. 32 89
  Pseudomonas putida KT2440 PP_1468 Tyrosine recombinase XerD strong 31 88
  Shewanella oneidensis MR-1 SO0950 xerD integrase/recombinase XerD (NCBI ptt file) strong 31 88
  Bifidobacterium breve UCC2003 BBR_RS16755 site-specific tyrosine recombinase XerD strong 30 87
  Kangiella aquimarina DSM 16071 B158DRAFT_2265 tyrosine recombinase XerD strong 29 90
  Pseudomonas sp. RS175 PFR28_00331 Tyrosine recombinase XerD strong 31 88
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1721 Tyrosine recombinase XerD strong 31 88
  Azospirillum sp. SherDot2 MPMX19_02643 Tyrosine recombinase XerD no data 30 91
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09520 site-specific tyrosine recombinase XerD sig. 27 87
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS05140 site-specific tyrosine recombinase XerD insig. 32 89
  Ralstonia solanacearum UW163 UW163_RS08485 site-specific tyrosine recombinase XerD insig. 32 89
  Dickeya dianthicola 67-19 HGI48_RS20045 tyrosine recombinase XerC strong 32 86
  Lysobacter sp. OAE881 ABIE51_RS03035 tyrosine recombinase XerC strong 31 83
  Dickeya dianthicola ME23 DZA65_RS21090 tyrosine recombinase XerC insig. 32 86
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10220 site-specific tyrosine recombinase XerD insig. 28 86
  Pseudomonas fluorescens FW300-N2C3 AO356_06385 recombinase XerD strong 30 88
  Pseudomonas simiae WCS417 PS417_22895 tyrosine recombinase XerD strong 29 88
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19035 integrase no data 27 86
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3011 Tyrosine recombinase XerD insig. 31 88