Homologs of PS417_24885 from Pseudomonas simiae WCS417

transcriptional regulator
SEED: Transcriptional regulator, XRE family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_24885 transcriptional regulator strong 100 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS34765 helix-turn-helix transcriptional regulator insig. 62 100
o Dickeya dadantii 3937 DDA3937_RS13775 helix-turn-helix transcriptional regulator insig. 56 100
o Dickeya dianthicola ME23 DZA65_RS07685 helix-turn-helix transcriptional regulator insig. 56 100
  Variovorax sp. OAS795 ABID97_RS23605 helix-turn-helix transcriptional regulator insig. 52 81
o Ralstonia solanacearum GMI1000 RS_RS11670 XRE family transcriptional regulator insig. 45 94
  Castellaniella sp019104865 MT123 ABCV34_RS15905 helix-turn-helix transcriptional regulator no data 55 79
  Ralstonia solanacearum PSI07 RPSI07_RS22035 XRE family transcriptional regulator insig. 57 74
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15920 XRE family transcriptional regulator no data 58 70
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23520 XRE family transcriptional regulator no data 58 70
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3490 Predicted transcriptional regulators no data 49 93
o Pseudomonas aeruginosa PA14 IKLFDK_12720 transcriptional regulator insig. 46 96
o Pseudomonas sp. S08-1 OH686_23020 Transcriptional regulator, Xre family insig. 47 84
  Desulfovibrio vulgaris Miyazaki F DvMF_0794 transcriptional regulator, XRE family (RefSeq) strong 49 78
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23980 XRE family transcriptional regulator insig. 43 100
  Alteromonas macleodii MIT1002 MIT1002_02112 anaerobic benzoate catabolism transcriptional regulator insig. 52 74
  Pseudomonas stutzeri RCH2 Psest_3408 Predicted transcriptional regulators sig. 47 74
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20215 transcriptional regulator insig. 41 75
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5451 hypothetical protein insig. 36 99
  Cupriavidus basilensis FW507-4G11 RR42_RS25810 DNA-binding protein insig. 44 79
  Variovorax sp. OAS795 ABID97_RS07740 helix-turn-helix transcriptional regulator insig. 43 69
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS09060 helix-turn-helix transcriptional regulator insig. 38 91
o Shewanella sp. ANA-3 Shewana3_3803 XRE family transcriptional regulator (RefSeq) cofit 42 80
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1294.1 hypothetical protein insig. 47 74
  Shewanella oneidensis MR-1 SO3867 transcriptional regulator, Cro/CI family (NCBI ptt file) insig. 43 74
  Dickeya dadantii 3937 DDA3937_RS04070 helix-turn-helix transcriptional regulator strong 46 75
  Shewanella oneidensis MR-1 SOA0002 type II restriction-modification system activator, putative (NCBI ptt file) strong 42 80
  Dechlorosoma suillum PS Dsui_2833 putative transcriptional regulator insig. 44 64
  Dickeya dadantii 3937 DDA3937_RS08405 helix-turn-helix transcriptional regulator no data 46 75
  Dickeya dadantii 3937 DDA3937_RS21910 helix-turn-helix transcriptional regulator insig. 43 75
  Dickeya dianthicola 67-19 HGI48_RS08550 helix-turn-helix transcriptional regulator insig. 43 75
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS16325 helix-turn-helix transcriptional regulator insig. 37 78
  Escherichia coli Nissle 1917 ECOLIN_RS26340 helix-turn-helix transcriptional regulator cofit 41 84
  Dickeya dianthicola 67-19 HGI48_RS08545 helix-turn-helix transcriptional regulator insig. 45 74
  Sinorhizobium meliloti 1021 SMc02184 transcriptional regulator insig. 42 77
  Escherichia coli ECRC100 OKFHMN_11715 hipB Transcriptional regulator, contains XRE-family HTH domain cofit 39 75
  Escherichia coli ECRC101 MCAODC_02230 hipB Transcriptional regulator, contains XRE-family HTH domain insig. 39 75
  Escherichia coli ECRC102 NIAGMN_09565 hipB Transcriptional regulator, contains XRE-family HTH domain insig. 39 75
  Escherichia coli ECRC99 KEDOAH_16430 hipB Transcriptional regulator, contains XRE-family HTH domain no data 39 75
  Shewanella loihica PV-4 Shew_3490 XRE family transcriptional regulator (RefSeq) insig. 38 78
  Azospirillum sp. SherDot2 MPMX19_01829 hypothetical protein no data 33 85
  Rhizobium sp. OAE497 ABIE40_RS21500 helix-turn-helix transcriptional regulator insig. 42 74
  Ralstonia solanacearum PSI07 RPSI07_RS25065 XRE family transcriptional regulator insig. 42 74
  Cupriavidus basilensis FW507-4G11 RR42_RS05700 hypothetical protein insig. 40 78
  Sphingobium sp. HT1-2 GFF3645 Transcriptional regulator, Xre family cofit 51 51
  Cupriavidus basilensis FW507-4G11 RR42_RS35135 transcriptional regulator insig. 38 88
  Herbaspirillum seropedicae SmR1 HSERO_RS11685 transcription factor no data 37 78
  Pseudomonas syringae pv. syringae B728a Psyr_3250 Helix-turn-helix motif protein insig. 44 77
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3250 Helix-turn-helix motif protein insig. 44 77
  Pseudomonas sp. BP01 JOY50_RS12560 helix-turn-helix domain-containing protein insig. 43 78
  Pseudomonas putida KT2440 PP_2232 XRE family transcriptional regulator sig. 43 78
  Pseudomonas fluorescens FW300-N2E3 AO353_21480 Cro/Cl family transcriptional regulator strong 41 78
  Sinorhizobium meliloti 1021 SM_b21117 transcriptional regulator insig. 40 74
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS19065 helix-turn-helix domain-containing protein no data 33 75
  Pseudomonas aeruginosa PA14 IKLFDK_06470 Cro/Cl family transcriptional regulator strong 45 77
  Caulobacter crescentus NA1000 CCNA_03267 HipB-related transcriptional regulatory protein cofit 42 77
  Caulobacter crescentus NA1000 Δfur CCNA_03267 HipB-related transcriptional regulatory protein cofit 42 77
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5820 Transcriptional regulator, Cro/CI family strong 40 77
  Pseudomonas aeruginosa MRSN321 DY961_RS19145 XRE family transcriptional regulator strong 45 77
  Pseudomonas aeruginosa PUPa3 DQ20_RS53270 XRE family transcriptional regulator strong 45 77
  Bacteroides stercoris CC31F HMPREF1181_RS12920 helix-turn-helix transcriptional regulator cofit 36 79
  Pseudomonas sp. DMC3 GFF3394 hypothetical protein cofit 41 78
  Pseudomonas fluorescens SBW25 PFLU_RS18830 helix-turn-helix domain-containing protein insig. 40 78
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18830 helix-turn-helix domain-containing protein strong 40 78
  Pseudomonas orientalis W4I3 QF045_RS18555 XRE family transcriptional regulator cofit 41 83
  Pseudomonas fluorescens FW300-N2C3 AO356_23290 Cro/Cl family transcriptional regulator sig. 42 77
  Pseudomonas simiae WCS417 PS417_16820 Cro/Cl family transcriptional regulator no data 40 78
  Caulobacter crescentus NA1000 CCNA_02789 Xre-family transcriptional regulator insig. 39 75
  Caulobacter crescentus NA1000 Δfur CCNA_02789 Xre-family transcriptional regulator cofit 39 75
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_541 Transcriptional regulator, Cro/CI family insig. 40 77
  Serratia liquefaciens MT49 IAI46_09015 helix-turn-helix transcriptional regulator no data 39 77
  Paraburkholderia sabiae LMG 24235 QEN71_RS33370 XRE family transcriptional regulator insig. 42 73
  Pseudomonas sp. RS175 PFR28_02400 hypothetical protein sig. 41 78
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03682 HTH-type transcriptional regulator SutR cofit 40 77
  Agrobacterium fabrum C58 Atu3572 transcriptional regulator sig. 36 94
  Escherichia coli BL21 ECD_10021 Repressor protein C2 no data 35 80
  Escherichia fergusonii Becca EFB2_02115 hypothetical protein no data 35 77
  Escherichia coli ECRC100 OKFHMN_02085 transcriptional regulator no data 35 77
  Escherichia coli ECRC98 JDDGAC_04645 transcriptional regulator no data 35 77
  Acidovorax sp. GW101-3H11 Ac3H11_4306 Predicted transcriptional regulators insig. 36 79
  Ralstonia solanacearum UW163 UW163_RS11585 XRE family transcriptional regulator insig. 30 81
  Enterobacter asburiae PDN3 EX28DRAFT_1040 Cupin domain/Helix-turn-helix insig. 40 83
  Herbaspirillum seropedicae SmR1 HSERO_RS00085 transcriptional regulator insig. 37 74
  Rahnella sp. WP5 EX31_RS13340 helix-turn-helix transcriptional regulator insig. 32 80
  Enterobacter sp. TBS_079 MPMX20_02411 hypothetical protein insig. 44 68
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21935 helix-turn-helix domain-containing protein sig. 37 74
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04530 hypothetical protein no data 37 78
  Sphingobium sp. HT1-2 GFF1865 Transcriptional regulator, Xre family cofit 42 68
  Bacteroides ovatus ATCC 8483 BACOVA_01340 DNA-binding helix-turn-helix protein insig. 31 86
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS01975 helix-turn-helix domain-containing protein no data 38 74
  Caulobacter crescentus NA1000 CCNA_00049 HTH transcriptional regulator sig. 37 77
  Caulobacter crescentus NA1000 Δfur CCNA_00049 HTH transcriptional regulator cofit 37 77
  Pantoea sp. MT58 IAI47_08085 helix-turn-helix domain-containing protein strong 37 77
  Magnetospirillum magneticum AMB-1 AMB_RS04000 XRE family transcriptional regulator insig. 35 77
  Rhodospirillum rubrum S1H Rru_A0278 Transcriptional Regulator, XRE family (NCBI) sig. 35 77
  Phaeobacter inhibens DSM 17395 PGA1_c28440 putative transcriptional regulator insig. 38 64
  Pseudomonas fluorescens SBW25 PFLU_RS23565 helix-turn-helix domain-containing protein insig. 37 78
  Pseudomonas fluorescens SBW25-INTG PFLU_RS23565 helix-turn-helix domain-containing protein insig. 37 78
  Castellaniella sp019104865 MT123 ABCV34_RS00635 helix-turn-helix transcriptional regulator sig. 35 84
  Magnetospirillum magneticum AMB-1 AMB_RS22610 XRE family transcriptional regulator cofit 31 95