Homologs of GFF4047 from Sphingobium sp. HT1-2

RNA polymerase ECF-type sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF4047 RNA polymerase ECF-type sigma factor cofit 100 100
  Sphingobium sp. HT1-2 GFF1845 hypothetical protein cofit 49 100
  Caulobacter crescentus NA1000 CCNA_01032 RNA polymerase ECF-type sigma factor cofit 41 74
  Caulobacter crescentus NA1000 Δfur CCNA_01032 RNA polymerase ECF-type sigma factor cofit 41 74
  Sphingobium sp. HT1-2 GFF5314 hypothetical protein cofit 38 88
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0584 RNA polymerase sigma factor, sigma-70 family insig. 35 77
  Variovorax sp. SCN45 GFF2401 hypothetical protein insig. 36 74
  Sphingobium sp. HT1-2 GFF5276 RNA polymerase, sigma-24 subunit, ECF subfamily cofit 32 77
  Sphingobium sp. HT1-2 GFF4091 hypothetical protein insig. 31 73
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0766 RNA polymerase sigma factor, sigma-70 family insig. 29 78
  Alteromonas macleodii MIT1002 MIT1002_03920 putative RNA polymerase sigma factor FecI cofit 31 66
  Alteromonas macleodii MIT1002 MIT1002_01237 Sigma-24 cofit 29 72
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1181 FIG006045: Sigma factor, ECF subfamily insig. 34 73
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09420 RNA polymerase sigma factor sig. 34 64
  Pseudomonas sp. BP01 JOY50_RS26335 sigma-70 family RNA polymerase sigma factor insig. 39 52
  Pseudomonas simiae WCS417 PS417_00670 RNA polymerase sigma factor sig. 32 68
  Pseudomonas putida KT2440 PP_0865 ECF subfamily RNA polymerase sigma-24 factor insig. 36 68
  Variovorax sp. SCN45 GFF1525 RNA polymerase ECF-type sigma factor insig. 32 64
  Pseudomonas sp. BP01 JOY50_RS22705 RNA polymerase sigma factor insig. 34 68
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0532 RNA polymerase sigma factor, sigma-70 family insig. 34 64
  Escherichia coli BL21 ECD_04159 RNA polymerase sigma-19 factor, fec operon-specific; ECF sigma factor insig. 27 74
  Escherichia coli Nissle 1917 ECOLIN_RS25750 RNA polymerase sigma factor FecI insig. 27 74
  Escherichia coli BW25113 b4293 fecI KpLE2 phage-like element; RNA polymerase, sigma 19 factor (NCBI) strong 27 74
  Pseudomonas sp. BP01 JOY50_RS18970 sigma-70 family RNA polymerase sigma factor insig. 35 71
  Escherichia coli ECOR38 HEPCGN_09830 fecI RNA polymerase sigma factor FecI insig. 29 68
  Pseudomonas fluorescens FW300-N2C3 AO356_05230 RNA polymerase subunit sigma-24 insig. 30 79
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19630 RNA polymerase sigma factor sig. 27 78
  Ralstonia solanacearum UW163 UW163_RS19545 RNA polymerase sigma factor insig. 27 78
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21465 RNA polymerase sigma factor insig. 31 63
  Ralstonia solanacearum UW163 UW163_RS17725 RNA polymerase sigma factor insig. 31 63
  Pseudomonas sp. BP01 JOY50_RS11380 RNA polymerase sigma factor insig. 30 79
  Pseudomonas putida KT2440 PP_1008 RNA polymerase subunit sigma-24 strong 30 79
  Pseudomonas putida KT2440 PP_4208 RNA polymerase sigma-70 factor, ECF subfamily strong 35 64
  Pseudomonas fluorescens FW300-N2E3 AO353_03435 RNA polymerase subunit sigma-24 insig. 29 76
  Herbaspirillum seropedicae SmR1 HSERO_RS12165 RNA polymerase sigma factor insig. 33 74
  Klebsiella pneumoniae MKP103 KDGMDA_00205 RNA polymerase sigma factor FecI insig. 28 74
  Pseudomonas aeruginosa PA14 IKLFDK_24795 RNA polymerase sigma factor insig. 38 49
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS02700 RNA polymerase sigma-70 factor insig. 29 63
  Pseudomonas sp. SVBP6 COO64_RS04525 RNA polymerase sigma factor insig. 28 76
  Pseudomonas aeruginosa MRSN321 DY961_RS27025 RNA polymerase sigma factor insig. 38 49
  Pseudomonas aeruginosa PUPa3 DQ20_RS31565 RNA polymerase sigma factor sig. 38 49
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0778 RNA polymerase sigma factor, sigma-70 family insig. 32 69
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1886 FIG006045: Sigma factor, ECF subfamily insig. 28 76
  Methylophilus sp. DMC18 GFF1078 hypothetical protein insig. 27 76
  Pseudomonas aeruginosa MRSN321 DY961_RS18835 RNA polymerase sigma factor insig. 31 66
  Pseudomonas aeruginosa PA14 IKLFDK_06170 RNA polymerase subunit sigma no data 31 66
  Pseudomonas aeruginosa PUPa3 DQ20_RS52975 RNA polymerase sigma factor insig. 31 66
  Ralstonia solanacearum PSI07 RPSI07_RS03580 RNA polymerase sigma factor insig. 27 78
  Pseudomonas orientalis W4I3 QF045_RS19140 sigma-70 family RNA polymerase sigma factor insig. 34 64
  Sphingobium sp. HT1-2 GFF5162 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 30 71
  Ralstonia solanacearum PSI07 RPSI07_RS01670 RNA polymerase sigma factor insig. 29 60
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2900 FIG006045: Sigma factor, ECF subfamily insig. 27 79
  Bacteroides ovatus ATCC 8483 BACOVA_03283 RNA polymerase sigma-70 factor insig. 26 75
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2394 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 33 64
  Pseudomonas simiae WCS417 PS417_17630 RNA polymerase sigma factor insig. 31 64
  Pseudomonas sp. SVBP6 COO64_RS02925 RNA polymerase sigma factor insig. 29 78
  Variovorax sp. SCN45 GFF4261 RNA polymerase ECF-type sigma factor insig. 34 59
  Caulobacter crescentus NA1000 CCNA_01187 RNA polymerase ECF-type sigma factor insig. 32 61
  Caulobacter crescentus NA1000 Δfur CCNA_01187 RNA polymerase ECF-type sigma factor cofit 32 61
  Pseudomonas syringae pv. syringae B728a Psyr_1107 Sigma-70 region 2 insig. 30 76
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1107 Sigma-70 region 2 insig. 30 76
  Pseudomonas sp. SVBP6 COO64_RS04025 sigma-70 family RNA polymerase sigma factor insig. 33 72
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_133 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis insig. 32 64
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3549 RNA polymerase sigma factor, sigma-70 family insig. 32 71
  Pseudomonas fluorescens SBW25 PFLU_RS26350 RNA polymerase sigma factor insig. 30 79
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26350 RNA polymerase sigma factor sig. 30 79
  Pseudomonas fluorescens SBW25 PFLU_RS05190 RNA polymerase sigma factor insig. 39 48
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05190 RNA polymerase sigma factor insig. 39 48
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09435 RNA polymerase sigma factor insig. 31 76
  Pseudomonas sp. DMC3 GFF1893 putative RNA polymerase sigma factor FecI insig. 32 74
  Bacteroides ovatus ATCC 8483 BACOVA_05617 RNA polymerase sigma-70 factor sig. 30 73
  Klebsiella michiganensis M5al BWI76_RS11395 RNA polymerase sigma factor FecI strong 29 68
  Pseudomonas sp. SVBP6 COO64_RS16380 RNA polymerase sigma factor insig. 34 68
  Azospirillum brasilense Sp245 AZOBR_RS27315 RNA polymerase sigma 70 insig. 31 68
  Pseudomonas simiae WCS417 PS417_24420 RNA polymerase sigma70 no data 30 76
  Pseudomonas sp. SVBP6 COO64_RS14455 sigma-70 family RNA polymerase sigma factor insig. 30 73
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09455 RNA polymerase sigma factor insig. 30 84
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_604 FIG006045: Sigma factor, ECF subfamily insig. 28 76
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15920 sigma-70 family RNA polymerase sigma factor insig. 26 80
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05575 RNA polymerase sigma-70 factor insig. 26 74
  Bacteroides stercoris CC31F HMPREF1181_RS02545 sigma-70 family RNA polymerase sigma factor insig. 30 73
  Pseudomonas sp. DMC3 GFF5154 hypothetical protein insig. 27 79
  Ralstonia solanacearum GMI1000 RS_RS21190 RNA polymerase sigma factor cofit 26 78
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01230 putative RNA polymerase sigma factor FecI insig. 31 74
  Bacteroides thetaiotaomicron VPI-5482 BT0139 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 33 60
  Pseudomonas fluorescens FW300-N2C3 AO356_07625 RNA polymerase subunit sigma insig. 31 63
  Pseudomonas sp. BP01 JOY50_RS26950 sigma-70 family RNA polymerase sigma factor insig. 31 68
  Pseudomonas sp. BP01 JOY50_RS04635 sigma-70 family RNA polymerase sigma factor insig. 39 49
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09360 RNA polymerase sigma factor insig. 32 78
  Pseudomonas sp. BP01 JOY50_RS15495 RNA polymerase sigma factor insig. 32 80
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05735 RNA polymerase sigma-70 factor insig. 24 69
  Pseudomonas orientalis W4I3 QF045_RS08105 RNA polymerase sigma factor insig. 37 48
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_21 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis sig. 31 64
  Pseudomonas simiae WCS417 PS417_09740 RNA polymerase subunit sigma-24 insig. 29 68
  Ralstonia solanacearum GMI1000 RS_RS19160 RNA polymerase sigma factor sig. 29 60
  Phocaeicola dorei CL03T12C01 ABI39_RS04680 RNA polymerase sigma factor insig. 27 80
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4951 FIG006045: Sigma factor, ECF subfamily insig. 37 48
  Sphingobium sp. HT1-2 GFF3691 RNA polymerase ECF-type sigma factor cofit 35 62
  Pseudomonas sp. DMC3 GFF759 putative RNA polymerase sigma factor FecI insig. 32 61
  Pseudomonas sp. BP01 JOY50_RS12990 sigma-70 family RNA polymerase sigma factor insig. 30 68
  Variovorax sp. SCN45 GFF4658 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 28 68
  Methylophilus sp. DMC18 GFF1870 hypothetical protein insig. 25 79
  Pseudomonas simiae WCS417 PS417_05120 RNA polymerase subunit sigma-24 insig. 37 48
  Bacteroides ovatus ATCC 8483 BACOVA_03855 RNA polymerase sigma-70 factor insig. 27 72
  Dechlorosoma suillum PS Dsui_2977 RNA polymerase sigma factor, sigma-70 family insig. 31 68
  Pseudomonas aeruginosa MRSN321 DY961_RS16440 sigma-70 family RNA polymerase sigma factor insig. 31 73
  Pseudomonas sp. RS175 PFR28_02867 putative RNA polymerase sigma factor FecI insig. 31 64
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_118 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 29 68
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15190 RNA polymerase sigma-70 factor insig. 27 73
  Pseudomonas orientalis W4I3 QF045_RS12270 sigma-70 family RNA polymerase sigma factor insig. 30 67
  Pseudomonas fluorescens SBW25 PFLU_RS19420 sigma-70 family RNA polymerase sigma factor insig. 30 64
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19420 sigma-70 family RNA polymerase sigma factor strong 30 64
  Methylophilus sp. DMC18 GFF1837 hypothetical protein insig. 36 50
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2852 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 strong 35 52
  Pectobacterium carotovorum WPP14 HER17_RS14055 sigma-70 family RNA polymerase sigma factor insig. 30 62
  Variovorax sp. SCN45 GFF1632 RNA polymerase ECF-type sigma factor insig. 34 63
  Pseudomonas sp. SVBP6 COO64_RS11395 RNA polymerase sigma factor insig. 31 74
  Pseudomonas aeruginosa PUPa3 DQ20_RS38760 sigma-70 family RNA polymerase sigma factor insig. 31 73
  Pseudomonas sp. BP01 JOY50_RS19220 RNA polymerase sigma factor insig. 30 54
  Pseudomonas sp. DMC3 GFF1353 putative RNA polymerase sigma factor FecI cofit 30 61
  Pseudomonas segetis P6 ACVTMO_RS15980 sigma-70 family RNA polymerase sigma factor insig. 30 71
  Cupriavidus basilensis FW507-4G11 RR42_RS28810 RNA polymerase sigma factor no data 31 68
  Pseudomonas sp. SVBP6 COO64_RS25100 sigma-70 family RNA polymerase sigma factor insig. 31 68
  Pseudomonas aeruginosa PA14 IKLFDK_10030 RNA polymerase subunit sigma insig. 30 73
  Pseudomonas aeruginosa MRSN321 DY961_RS28585 sigma-70 family RNA polymerase sigma factor insig. 30 68
  Pseudomonas aeruginosa PA14 IKLFDK_09340 RNA polymerase subunit sigma no data 30 68
  Pseudomonas aeruginosa PUPa3 DQ20_RS38070 sigma-70 family RNA polymerase sigma factor no data 30 68
  Pseudomonas sp. SVBP6 COO64_RS16360 RNA polymerase sigma factor sig. 30 66
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05630 RNA polymerase sigma-70 factor sig. 26 66
  Bacteroides ovatus ATCC 8483 BACOVA_01298 RNA polymerase sigma-70 factor insig. 32 60
  Lysobacter sp. OAE881 ABIE51_RS06950 RNA polymerase sigma factor strong 31 68
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3412 FIG006045: Sigma factor, ECF subfamily insig. 31 63
  Pseudomonas stutzeri RCH2 Psest_4339 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog strong 30 68
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.715.1 RNA polymerase sigma factor insig. 30 68
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12120 RNA polymerase sigma factor strong 27 80
  Rhodospirillum rubrum S1H Rru_A1438 Sigma-24 (FecI) (NCBI) cofit 33 60
  Xanthobacter sp. DMC5 GFF2135 putative RNA polymerase sigma factor FecI insig. 33 61
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12340 RNA polymerase sigma-70 factor cofit 29 65
  Pseudomonas sp. BP01 JOY50_RS24800 sigma-70 family RNA polymerase sigma factor insig. 29 71
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_29 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 29 68
  Azospirillum brasilense Sp245 AZOBR_RS26615 RNA polymerase insig. 28 81
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3981 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 28 73
  Pseudomonas sp. DMC3 GFF1889 putative RNA polymerase sigma factor FecI cofit 28 72
  Acinetobacter baumannii LAC-4 RR41_RS08490 sigma-70 family RNA polymerase sigma factor strong 25 73
  Phocaeicola dorei CL03T12C01 ABI39_RS08670 RNA polymerase sigma-70 factor cofit 35 49
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12435 hypothetical protein insig. 33 64
  Pseudomonas segetis P6 ACVTMO_RS03680 sigma-70 family RNA polymerase sigma factor insig. 31 68
  Pseudomonas aeruginosa PUPa3 DQ20_RS53290 RNA polymerase sigma factor insig. 30 58
  Rahnella sp. WP5 EX31_RS16485 sigma-70 family RNA polymerase sigma factor insig. 29 68
  Phocaeicola dorei CL03T12C01 ABI39_RS10300 RNA polymerase sigma-70 factor sig. 29 62
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13700 hypothetical protein insig. 28 61
  Dechlorosoma suillum PS Dsui_0621 RNA polymerase sigma factor, sigma-70 family insig. 28 60
  Methylophilus sp. DMC18 GFF230 hypothetical protein insig. 27 72
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12920 RNA polymerase sigma-70 factor cofit 25 67
  Cellulophaga baltica 18 M666_RS18055 sigma-70 family RNA polymerase sigma factor insig. 25 73
  Pseudomonas fluorescens FW300-N2E3 AO353_04915 RNA polymerase subunit sigma-24 insig. 47 30
  Pseudomonas putida KT2440 PP_4608 RNA polymerase sigma-70 factor, ECF subfamily insig. 34 55
  Dechlorosoma suillum PS Dsui_2948 RNA polymerase sigma factor, sigma-70 family insig. 30 71
  Pseudomonas aeruginosa MRSN321 DY961_RS19165 RNA polymerase sigma factor insig. 30 58
  Pseudomonas aeruginosa PA14 IKLFDK_06490 RNA polymerase subunit sigma-70 insig. 30 58
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2440 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 30 68
  Pseudomonas aeruginosa PUPa3 DQ20_RS41200 RNA polymerase sigma factor insig. 30 78
  Dechlorosoma suillum PS Dsui_1673 RNA polymerase sigma factor, sigma-70 family no data 29 62
  Pseudomonas fluorescens FW300-N2C3 AO356_16910 RNA polymerase subunit sigma insig. 28 72
  Bacteroides ovatus ATCC 8483 BACOVA_01909 Sigma-70 region 2 sig. 27 80
  Pseudomonas sp. BP01 JOY50_RS27280 sigma-70 family RNA polymerase sigma factor insig. 36 52
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0477 RNA polymerase sigma factor, sigma-70 family insig. 32 64
  Pseudomonas fluorescens FW300-N2C3 AO356_21215 RNA polymerase subunit sigma-24 insig. 29 68
  Variovorax sp. OAS795 ABID97_RS21425 sigma-70 family RNA polymerase sigma factor insig. 27 83
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02400 RNA polymerase sigma factor cofit 27 66
  Paraburkholderia sabiae LMG 24235 QEN71_RS15135 sigma-70 family RNA polymerase sigma factor insig. 29 69
  Bacteroides thetaiotaomicron VPI-5482 BT3396 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 27 80
  Serratia liquefaciens MT49 IAI46_11745 sigma-70 family RNA polymerase sigma factor no data 26 68
  Pseudomonas stutzeri RCH2 Psest_0650 RNA polymerase sigma factor, sigma-70 family insig. 37 52
  Sinorhizobium meliloti 1021 SMc04203 RNA polymerase sigma factor FECI protein insig. 32 62
  Agrobacterium fabrum C58 Atu3387 sigma factor insig. 30 67
  Pseudomonas stutzeri RCH2 Psest_3456 RNA polymerase sigma factor, sigma-70 family insig. 28 77
  Bacteroides thetaiotaomicron VPI-5482 BT1278 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 24 72
  Paraburkholderia sabiae LMG 24235 QEN71_RS22515 RNA polymerase sigma factor insig. 31 73
  Variovorax sp. SCN45 GFF2440 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 29 60
  Pseudomonas fluorescens FW300-N2C3 AO356_21710 RNA polymerase subunit sigma insig. 29 68
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3924 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 strong 28 61
  Pseudomonas fluorescens SBW25 PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 28 68
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 28 68
  Variovorax sp. SCN45 GFF1524 FIG006045: Sigma factor, ECF subfamily insig. 27 68
  Pseudomonas sp. SVBP6 COO64_RS08375 sigma-70 family RNA polymerase sigma factor insig. 30 61
  Rhodopseudomonas palustris CGA009 TX73_012350 RNA polymerase sigma factor insig. 29 77
  Bacteroides ovatus ATCC 8483 BACOVA_03564 RNA polymerase sigma-70 factor insig. 34 61
  Pseudomonas aeruginosa MRSN321 DY961_RS15880 RNA polymerase sigma factor sig. 29 77
  Pseudomonas aeruginosa PA14 IKLFDK_17505 RNA polymerase subunit sigma-70 insig. 29 77
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS06665 RNA polymerase sigma factor insig. 29 61
  Ralstonia solanacearum UW163 UW163_RS06960 RNA polymerase sigma factor insig. 29 61
  Pseudomonas syringae pv. syringae B728a Psyr_1040 RNA polymerase sigma factor, ECF subfamily strong 27 66
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1040 RNA polymerase sigma factor, ECF subfamily insig. 27 66
  Pseudomonas fluorescens FW300-N2C3 AO356_10620 RNA polymerase subunit sigma insig. 35 51
  Pseudomonas sp. RS175 PFR28_00232 putative RNA polymerase sigma factor FecI insig. 27 72
  Pseudomonas simiae WCS417 PS417_06880 RNA polymerase sigma factor insig. 31 66
  Azospirillum sp. SherDot2 MPMX19_03088 putative RNA polymerase sigma factor FecI insig. 29 68
  Herbaspirillum seropedicae SmR1 HSERO_RS22395 RNA polymerase sigma factor insig. 29 66
  Variovorax sp. SCN45 GFF5284 RNA polymerase ECF-type sigma factor insig. 29 68
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS09605 RNA polymerase sigma-70 factor insig. 28 68
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04694 ECF RNA polymerase sigma factor SigE cofit 27 79
  Sphingobium sp. HT1-2 GFF2714 FIG006045: Sigma factor, ECF subfamily insig. 30 66
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4566 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 29 65
  Pseudomonas sp. RS175 PFR28_02540 putative RNA polymerase sigma factor FecI insig. 27 60
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5307 FIG006045: Sigma factor, ECF subfamily strong 27 72
  Pseudomonas sp. DMC3 GFF570 putative RNA polymerase sigma factor FecI cofit 32 68
  Ralstonia solanacearum GMI1000 RS_RS14615 RNA polymerase sigma factor insig. 31 67
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12095 RNA polymerase subunit sigma-70 insig. 29 70
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12140 hypothetical protein insig. 29 62
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09390 sigma-70 family RNA polymerase sigma factor insig. 36 37
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24305 hypothetical protein sig. 35 48
  Castellaniella sp019104865 MT123 ABCV34_RS11175 sigma-70 family RNA polymerase sigma factor insig. 32 56
  Pseudomonas fluorescens SBW25 PFLU_RS28550 RNA polymerase sigma factor insig. 30 74
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28550 RNA polymerase sigma factor insig. 30 74
  Pseudomonas simiae WCS417 PS417_22700 RNA polymerase subunit sigma-24 strong 29 79
  Pectobacterium carotovorum WPP14 HER17_RS21290 sigma-70 family RNA polymerase sigma factor insig. 28 66
  Variovorax sp. SCN45 GFF5806 RNA polymerase ECF-type sigma factor insig. 28 73
  Pseudomonas fluorescens FW300-N2C3 AO356_22495 RNA polymerase subunit sigma-24 insig. 27 60
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_398 FIG006045: Sigma factor, ECF subfamily insig. 27 60
  Bacteroides thetaiotaomicron VPI-5482 BT3010 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 26 69
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11515 RNA polymerase sigma-70 factor insig. 29 62
  Pseudomonas putida KT2440 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily strong 28 71
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2098 heme uptake regulator insig. 28 68
  Pseudomonas simiae WCS417 PS417_09655 RNA polymerase sigma factor insig. 28 73
  Pseudomonas fluorescens FW300-N2C3 AO356_14080 RNA polymerase subunit sigma insig. 27 66
  Methylophilus sp. DMC18 GFF1839 hypothetical protein insig. 25 62
  Pectobacterium carotovorum WPP14 HER17_RS17615 sigma-70 family RNA polymerase sigma factor insig. 25 70
  Cupriavidus basilensis FW507-4G11 RR42_RS14080 RNA polymerase sigma factor RpoE strong 29 66
  Pseudomonas sp. RS175 PFR28_00037 putative RNA polymerase sigma factor FecI insig. 29 63
  Pseudomonas fluorescens FW300-N2C3 AO356_21175 RNA polymerase subunit sigma strong 29 64
  Bacteroides ovatus ATCC 8483 BACOVA_00883 RNA polymerase sigma-70 factor insig. 29 66
  Pseudomonas orientalis W4I3 QF045_RS24870 sigma-70 family RNA polymerase sigma factor insig. 28 79
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17460 RNA polymerase sigma-70 factor insig. 25 75
  Pseudomonas fluorescens SBW25 PFLU_RS06940 sigma-70 family RNA polymerase sigma factor insig. 31 66
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06940 sigma-70 family RNA polymerase sigma factor sig. 31 66
  Pseudomonas sp. BP01 JOY50_RS22945 sigma-70 family RNA polymerase sigma factor insig. 30 68
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00590 RNA polymerase sigma-70 factor insig. 29 61
  Xanthobacter sp. DMC5 GFF2704 putative RNA polymerase sigma factor FecI insig. 29 61
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08220 RNA polymerase sigma-70 factor insig. 29 72
  Pseudomonas sp. BP01 JOY50_RS10200 sigma-70 family RNA polymerase sigma factor insig. 28 71
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13395 sigma-70 family RNA polymerase sigma factor cofit 28 82
  Bacteroides stercoris CC31F HMPREF1181_RS06910 sigma-70 family RNA polymerase sigma factor insig. 26 57
  Pseudomonas sp. RS175 PFR28_00559 ECF RNA polymerase sigma factor SigE insig. 26 81
  Rhizobium sp. OAE497 ABIE40_RS15675 sigma-70 family RNA polymerase sigma factor insig. 26 85
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1008 FIG006045: Sigma factor, ECF subfamily insig. 26 73
  Pseudomonas sp. BP01 JOY50_RS02515 sigma-70 family RNA polymerase sigma factor insig. 25 76
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1381 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 30 67
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3565 heme uptake regulator insig. 29 68
  Pseudomonas simiae WCS417 PS417_16255 RNA polymerase sigma factor sig. 27 68