Homologs of HP15_3537 from Marinobacter adhaerens HP15

protein containing RNA polymerase sigma-70 domain

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Marinobacter adhaerens HP15 HP15_3537 protein containing RNA polymerase sigma-70 domain sig. 100 100
  Marinobacter adhaerens HP15 HP15_1654 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 49 97
  Marinobacter adhaerens HP15 HP15_3848 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 34 94
  Pseudomonas aeruginosa PA14 IKLFDK_16830 RNA polymerase subunit sigma-24 insig. 33 95
  Kangiella aquimarina DSM 16071 B158DRAFT_0596 RNA polymerase sigma factor, sigma-70 family insig. 28 93
  Pseudomonas sp. SVBP6 COO64_RS21990 RNA polymerase sigma factor insig. 30 98
  Pseudomonas fluorescens FW300-N2C3 AO356_04270 RNA polymerase subunit sigma-24 insig. 28 98
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2692 RNA polymerase sigma factor RpoE sig. 28 98
  Pseudomonas sp. S08-1 OH686_05515 RNA polymerase sigma factor RpoE cofit 29 95
  Pseudomonas sp. RS175 PFR28_00741 ECF RNA polymerase sigma-E factor insig. 27 98
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04263 ECF RNA polymerase sigma-E factor insig. 27 98
  Pseudomonas fluorescens FW300-N2E3 AO353_18235 RNA polymerase subunit sigma-24 insig. 31 95
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3390 RNA polymerase sigma factor RpoE insig. 29 98
  Pseudomonas simiae WCS417 PS417_20565 RNA polymerase subunit sigma-24 insig. 28 98
  Pseudomonas fluorescens SBW25 PFLU_RS22255 RNA polymerase sigma factor cofit 29 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22255 RNA polymerase sigma factor insig. 29 94
  Castellaniella sp019104865 MT123 ABCV34_RS07155 RNA polymerase sigma factor insig. 26 92
  Pseudomonas sp. DMC3 GFF2343 ECF RNA polymerase sigma-E factor insig. 29 95
  Cellulophaga baltica 18 M666_RS11420 RNA polymerase sigma factor insig. 28 95
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00075 RNA polymerase sigma factor cofit 28 98
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19950 RNA polymerase subunit sigma-24 insig. 31 93
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19605 RNA polymerase insig. 29 96
  Sinorhizobium meliloti 1021 SM_b20592 RNA polymerase sigma factor insig. 28 82
  Kangiella aquimarina DSM 16071 B158DRAFT_2027 RNA polymerase sigma factor, sigma-70 family insig. 26 96
  Cupriavidus basilensis FW507-4G11 RR42_RS05810 RNA polymerase sigma factor insig. 29 93
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS00650 RNA polymerase sigma factor insig. 40 45
  Pseudomonas fluorescens FW300-N2C3 AO356_02795 RNA polymerase subunit sigma no data 38 51
  Pseudomonas fluorescens SBW25 PFLU_RS22600 RNA polymerase sigma factor SigX strong 38 51
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22600 RNA polymerase sigma factor SigX strong 38 51
  Pseudomonas simiae WCS417 PS417_20990 RNA polymerase sigma factor SigX no data 38 51
  Pseudomonas sp. BP01 JOY50_RS22140 sigX RNA polymerase sigma factor SigX insig. 38 51
  Pseudomonas putida KT2440 PP_2088 RNA polymerase sigma factor SigX strong 38 51
  Rhodanobacter sp. FW510-T8 OKGIIK_14380 RNA polymerase sigma factor insig. 34 57
  Caulobacter crescentus NA1000 CCNA_02837 RNA polymerase ECF-type sigma factor insig. 27 96
  Caulobacter crescentus NA1000 Δfur CCNA_02837 RNA polymerase ECF-type sigma factor cofit 27 96
  Cupriavidus basilensis FW507-4G11 RR42_RS14080 RNA polymerase sigma factor RpoE strong 26 94
  Herbaspirillum seropedicae SmR1 HSERO_RS09625 RNA polymerase sigma factor RpoE no data 26 94
  Rhodanobacter denitrificans MT42 LRK55_RS07625 RNA polymerase sigma factor insig. 39 46
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07895 RNA polymerase sigma factor insig. 39 46
  Cellulophaga baltica 18 M666_RS01545 sigma-70 family RNA polymerase sigma factor insig. 24 96
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14445 RNA polymerase sigma factor RpoE strong 24 98
  Ralstonia solanacearum GMI1000 RS_RS05225 RNA polymerase sigma factor RpoE strong 24 98
  Ralstonia solanacearum PSI07 RPSI07_RS19015 RNA polymerase sigma factor RpoE strong 24 98
  Ralstonia solanacearum UW163 UW163_RS11910 RNA polymerase sigma factor RpoE insig. 24 98
  Ralstonia sp. UNC404CL21Col ABZR87_RS10165 RNA polymerase sigma factor RpoE strong 24 98
  Rhodopseudomonas palustris CGA009 TX73_023085 RNA polymerase sigma factor cofit 25 98
  Pseudomonas sp. SVBP6 COO64_RS05350 sigX RNA polymerase sigma factor SigX no data 37 51
  Pseudomonas syringae pv. syringae B728a Psyr_2096 Sigma-70 region 2 no data 37 51
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2096 Sigma-70 region 2 no data 37 51
  Fusobacterium nucleatum SB010 HUW76_07635 RNA polymerase sigma factor no data 23 73
  Herbaspirillum seropedicae SmR1 HSERO_RS12085 RNA polymerase sigma-E factor protein insig. 22 99
  Kangiella aquimarina DSM 16071 B158DRAFT_2180 RNA polymerase, sigma-24 subunit, RpoE strong 24 99
  Pseudomonas aeruginosa PA14 IKLFDK_08585 RNA polymerase sigma factor SigX no data 36 51
  Vibrio cholerae E7946 ATCC 55056 CSW01_12485 RNA polymerase sigma factor RpoE no data 26 98
  Variovorax sp. OAS795 ABID97_RS08330 RNA polymerase sigma factor RpoE strong 26 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01538 RNA polymerase sigma-70 factor, ECF subfamily insig. 25 95
  Dechlorosoma suillum PS Dsui_2453 RNA polymerase sigma factor RpoE no data 25 94
  Paraburkholderia graminis OAS925 ABIE53_005146 RNA polymerase sigma factor (sigma-70 family) sig. 23 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS18240 RNA polymerase sigma factor insig. 24 91
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04360 sigma-70 family RNA polymerase sigma factor insig. 23 96
  Pseudomonas fluorescens FW300-N2E3 AO353_00830 RNA polymerase subunit sigma no data 36 51
  Variovorax sp. SCN45 GFF3863 RNA polymerase sigma factor RpoE insig. 28 95
  Bosea sp. OAE506 ABIE41_RS07610 sigma-70 family RNA polymerase sigma factor insig. 26 90
  Bacteroides thetaiotaomicron VPI-5482 BT1817 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 25 97
  Cellulophaga baltica 18 M666_RS15960 RNA polymerase sigma factor insig. 26 93
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12595 RNA polymerase subunit sigma-24 insig. 25 96
  Shewanella loihica PV-4 Shew_1231 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 32 44
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00391 RNA polymerase sigma-H factor cofit 24 92
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04355 RNA polymerase, sigma-24 subunit, RpoE no data 25 94
  Burkholderia phytofirmans PsJN BPHYT_RS14405 RNA polymerase sigma factor RpoE no data 25 94
  Paraburkholderia graminis OAS925 ABIE53_003043 RNA polymerase sigma-70 factor (ECF subfamily) strong 25 94
  Shewanella oneidensis MR-1 SO3551 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 31 59
  Escherichia coli BL21 ECD_02467 RNA polymerase sigma E factor no data 25 98
  Escherichia fergusonii Becca EFB2_01323 ECF RNA polymerase sigma-E factor no data 25 98
  Escherichia coli ECOR27 NOLOHH_13050 rpoE RNA polymerase sigma factor RpoE no data 25 98
  Escherichia coli ECOR38 HEPCGN_20520 rpoE RNA polymerase sigma factor RpoE no data 25 98
  Escherichia coli ECRC100 OKFHMN_21375 rpoE RNA polymerase sigma factor RpoE no data 25 98
  Escherichia coli ECRC101 MCAODC_11905 rpoE RNA polymerase sigma factor RpoE no data 25 98
  Escherichia coli ECRC102 NIAGMN_19145 rpoE RNA polymerase sigma factor RpoE no data 25 98
  Escherichia coli ECRC62 BNILDI_11850 rpoE RNA polymerase sigma factor RpoE no data 25 98
  Escherichia coli ECRC98 JDDGAC_25040 rpoE RNA polymerase sigma factor RpoE no data 25 98
  Escherichia coli ECRC99 KEDOAH_06845 rpoE RNA polymerase sigma factor RpoE no data 25 98
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01134 ECF RNA polymerase sigma-E factor no data 25 98
  Escherichia coli Nissle 1917 ECOLIN_RS14560 RNA polymerase sigma factor RpoE no data 25 98
  Escherichia coli BW25113 b2573 rpoE RNA polymerase, sigma 24 (sigma E) factor (NCBI) no data 25 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS04575 RNA polymerase sigma factor RpoE strong 25 94
  Dickeya dadantii 3937 DDA3937_RS15765 RNA polymerase sigma factor RpoE strong 34 42
  Methylophilus sp. DMC18 GFF2730 RNA polymerase sigma-H factor no data 32 42
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02732 RNA polymerase sigma-70 factor, ECF subfamily insig. 28 99
  Pseudomonas simiae WCS417 PS417_00810 RNA polymerase sigma factor insig. 25 92
  Pseudomonas fluorescens SBW25 PFLU_RS00840 RNA polymerase sigma factor insig. 25 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00840 RNA polymerase sigma factor sig. 25 92
  Alteromonas macleodii MIT1002 MIT1002_03807 Sigma-W factor insig. 30 44
  Methylophilus sp. DMC18 GFF1725 ECF RNA polymerase sigma factor SigM insig. 28 85
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10790 RNA polymerase sigma factor insig. 27 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2107 RNA polymerase sigma factor RpoE no data 25 98
  Dickeya dianthicola 67-19 HGI48_RS15850 RNA polymerase sigma factor RpoE cofit 33 42
  Dickeya dianthicola ME23 DZA65_RS16930 RNA polymerase sigma factor RpoE strong 33 42
  Enterobacter asburiae PDN3 EX28DRAFT_0072 RNA polymerase sigma factor RpoE no data 33 42
  Enterobacter sp. TBS_079 MPMX20_03444 ECF RNA polymerase sigma-E factor no data 33 42