Homologs of GFF2006 from Sphingobium sp. HT1-2

putative membrane protein

70 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF2006 putative membrane protein cofit 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2513 Domain of unknown function (DUF4115)/Helix-turn-helix domain sig. 41 88
  Herbaspirillum seropedicae SmR1 HSERO_RS14805 membrane protein no data 44 28
  Pseudomonas sp. DMC3 GFF4340 Cytoskeleton protein RodZ cofit 28 41
  Shewanella sp. ANA-3 Shewana3_1228 hypothetical protein (RefSeq) strong 29 50
  Pseudomonas sp. RS175 PFR28_00296 Cytoskeleton protein RodZ strong 28 41
  Pseudomonas fluorescens SBW25 PFLU_RS24805 helix-turn-helix domain-containing protein strong 26 46
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24805 helix-turn-helix domain-containing protein strong 26 46
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4863 FIG021952: putative membrane protein sig. 27 41
  Pseudomonas fluorescens FW300-N2E3 AO353_15885 Cro/Cl family transcriptional regulator strong 26 41
  Dechlorosoma suillum PS Dsui_3143 hypothetical protein no data 41 23
  Methylophilus sp. DMC18 GFF1189 Cytoskeleton protein RodZ no data 45 19
  Pseudomonas simiae WCS417 PS417_23150 Cro/Cl family transcriptional regulator strong 26 46
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_855 FIG021952: putative membrane protein sig. 27 40
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04782 Cytoskeleton protein RodZ cofit 26 46
  Shewanella oneidensis MR-1 SO3313 conserved hypothetical protein (NCBI ptt file) strong 28 50
  Pseudomonas orientalis W4I3 QF045_RS25370 helix-turn-helix domain-containing protein cofit 28 41
  Pseudomonas fluorescens FW300-N2C3 AO356_06595 Cro/Cl family transcriptional regulator no data 28 41
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3179 FIG021952: putative membrane protein strong 28 41
  Kangiella aquimarina DSM 16071 B158DRAFT_1151 Uncharacterized protein conserved in bacteria sig. 25 50
  Magnetospirillum magneticum AMB-1 AMB_RS08155 DUF4115 domain-containing protein insig. 31 38
  Pseudomonas syringae pv. syringae B728a Psyr_1247 conserved hypothetical protein sig. 29 35
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1247 conserved hypothetical protein insig. 29 35
  Ralstonia solanacearum GMI1000 RS_RS06080 DUF4115 domain-containing protein no data 35 35
  Ralstonia solanacearum PSI07 RPSI07_RS18105 DUF4115 domain-containing protein no data 33 35
  Pseudomonas segetis P6 ACVTMO_RS07515 RodZ domain-containing protein cofit 27 41
  Pseudomonas aeruginosa MRSN321 DY961_RS13900 helix-turn-helix domain-containing protein insig. 27 41
  Pseudomonas aeruginosa PA14 IKLFDK_19590 DUF4115 domain-containing protein sig. 27 41
  Pseudomonas aeruginosa PUPa3 DQ20_RS43200 RodZ family helix-turn-helix domain-containing protein sig. 27 41
  Caulobacter crescentus NA1000 CCNA_00893 helix-turn-helix DNA-binding protein strong 44 22
  Caulobacter crescentus NA1000 Δfur CCNA_00893 helix-turn-helix DNA-binding protein cofit 44 22
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14480 helix-turn-helix domain-containing protein insig. 43 25
  Pseudomonas sp. S08-1 OH686_17525 Cytoskeleton protein RodZ sig. 26 38
  Cupriavidus basilensis FW507-4G11 RR42_RS13145 DNA-binding protein insig. 34 43
  Synechococcus elongatus PCC 7942 Synpcc7942_1056 transcriptional regulator, XRE family strong 34 37
  Azospirillum sp. SherDot2 MPMX19_02450 hypothetical protein sig. 40 26
  Pseudomonas stutzeri RCH2 Psest_1261 Uncharacterized protein conserved in bacteria sig. 31 32
  Ralstonia sp. UNC404CL21Col ABZR87_RS10910 RodZ family helix-turn-helix domain-containing protein sig. 47 19
  Variovorax sp. SCN45 GFF994 Cytoskeleton protein RodZ insig. 25 69
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15270 DUF4115 domain-containing protein insig. 43 19
  Ralstonia solanacearum UW163 UW163_RS12735 DUF4115 domain-containing protein no data 43 19
  Alteromonas macleodii MIT1002 MIT1002_02789 Cytoskeleton protein RodZ insig. 26 43
  Desulfovibrio vulgaris Hildenborough JW710 DVU1900 conserved hypothetical protein (TIGR) strong 39 25
  Acinetobacter baumannii LAC-4 RR41_RS16450 DUF4115 domain-containing protein strong 23 61
  Desulfovibrio vulgaris Miyazaki F DvMF_0288 transcriptional regulator, XRE family (RefSeq) strong 43 20
  Synechococcus elongatus PCC 7942 Synpcc7942_1009 transcriptional regulator, XRE family insig. 40 24
  Rhodospirillum rubrum S1H Rru_A0746 hypothetical protein (NCBI) cofit 35 37
  Burkholderia phytofirmans PsJN BPHYT_RS12585 XRE family transcriptional regulator no data 30 28
  Rhodanobacter sp. FW510-T8 OKGIIK_07130 DUF4115 domain-containing protein sig. 33 25
  Acinetobacter radioresistens SK82 MPMX26_00428 Cytoskeleton protein RodZ strong 37 21
  Pseudomonas putida KT2440 PP_0852 Transcriptional regulator, Cro/CI family strong 36 21
  Paraburkholderia sabiae LMG 24235 QEN71_RS05970 helix-turn-helix domain-containing protein cofit 33 19
  Rhodanobacter denitrificans MT42 LRK55_RS18075 helix-turn-helix domain-containing protein strong 31 25
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00080 helix-turn-helix domain-containing protein strong 31 25
  Paraburkholderia graminis OAS925 ABIE53_002743 cytoskeleton protein RodZ strong 35 19
  Pseudomonas sp. BP01 JOY50_RS22770 RodZ domain-containing protein insig. 35 21
  Marinobacter adhaerens HP15 HP15_1492 conserved hypothetical protein cofit 34 25
  Shewanella amazonensis SB2B Sama_2366 hypothetical protein (RefSeq) insig. 30 27
  Pseudomonas sp. SVBP6 COO64_RS03945 RodZ domain-containing protein insig. 26 32
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0286 Helix-turn-helix domain insig. 37 20
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS11185 DUF4115 domain-containing protein insig. 30 25
  Magnetospirillum magneticum AMB-1 AMB_RS08155 DUF4115 domain-containing protein insig. 29 26
  Dickeya dianthicola 67-19 HGI48_RS15580 cytoskeleton protein RodZ sig. 38 23
  Dickeya dianthicola ME23 DZA65_RS16655 cytoskeleton protein RodZ insig. 38 23
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2735.1 FIG016519: Putative DNA-binding protein insig. 37 19
  Variovorax sp. OAS795 ABID97_RS14220 helix-turn-helix domain-containing protein no data 37 20
  Variovorax sp. OAS795 ABID97_RS14220 helix-turn-helix domain-containing protein no data 37 19
  Dickeya dadantii 3937 DDA3937_RS15470 cytoskeleton protein RodZ insig. 37 23
  Dinoroseobacter shibae DFL-12 Dshi_1183 hypothetical protein (RefSeq) no data 31 39
  Vibrio cholerae E7946 ATCC 55056 CSW01_03935 cytoskeleton protein RodZ insig. 22 38