Homologs of Psest_1327 from Pseudomonas stutzeri RCH2

Superfamily II DNA/RNA helicases, SNF2 family
SEED: RNA polymerase associated protein RapA (EC 3.6.1.-)
KEGG: ATP-dependent helicase HepA

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas stutzeri RCH2 Psest_1327 Superfamily II DNA/RNA helicases, SNF2 family sig. 100 100
o Pseudomonas sp. SVBP6 COO64_RS17145 rapA RNA polymerase-associated protein RapA cofit 87 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4599 RNA polymerase associated protein RapA (EC 3.6.1.-) sig. 86 100
o Pseudomonas sp. DMC3 GFF2193 RNA polymerase-associated protein RapA cofit 86 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3224 RNA polymerase associated protein RapA (EC 3.6.1.-) sig. 86 100
o Pseudomonas fluorescens FW300-N2C3 AO356_04975 RNA polymerase-associated protein RapA sig. 86 100
o Pseudomonas sp. RS175 PFR28_00612 RNA polymerase-associated protein RapA insig. 86 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2845 RNA polymerase associated protein RapA (EC 3.6.1.-) strong 86 100
o Pseudomonas sp. S08-1 OH686_19955 RNA polymerase associated protein RapA insig. 87 100
o Pseudomonas fluorescens FW300-N2E3 AO353_17155 RNA polymerase-associated protein RapA sig. 86 100
o Pseudomonas fluorescens SBW25 PFLU_RS06675 RNA polymerase-associated protein RapA cofit 86 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS06675 RNA polymerase-associated protein RapA sig. 86 100
o Pseudomonas sp. BP01 JOY50_RS24235 rapA RNA polymerase-associated protein RapA cofit 85 100
o Pseudomonas putida KT2440 PP_1145 RNA polymerase-associated protein RapA sig. 85 100
o Pseudomonas syringae pv. syringae B728a Psyr_3842 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit sig. 85 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3842 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit sig. 85 100
o Pseudomonas simiae WCS417 PS417_06645 RNA polymerase-associated protein RapA strong 86 100
o Pseudomonas aeruginosa PA14 IKLFDK_16965 RNA polymerase-associated protein RapA cofit 84 100
o Escherichia fergusonii Becca EFB2_03986 RNA polymerase-associated protein RapA insig. 52 99
o Escherichia coli Nissle 1917 ECOLIN_RS00315 RNA polymerase-associated protein RapA strong 52 99
o Escherichia coli BL21 ECD_00061 RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase strong 52 99
o Escherichia coli ECOR27 NOLOHH_03145 rapA RNA polymerase-associated protein RapA strong 52 99
o Escherichia coli ECRC100 OKFHMN_10800 rapA RNA polymerase-associated protein RapA strong 52 99
o Escherichia coli ECRC101 MCAODC_01315 rapA RNA polymerase-associated protein RapA strong 52 99
o Escherichia coli ECRC102 NIAGMN_08650 rapA RNA polymerase-associated protein RapA sig. 52 99
o Escherichia coli ECRC62 BNILDI_08460 rapA RNA polymerase-associated protein RapA cofit 52 99
o Escherichia coli ECRC98 JDDGAC_14395 rapA RNA polymerase-associated protein RapA strong 52 99
o Escherichia coli ECRC99 KEDOAH_17355 rapA RNA polymerase-associated protein RapA no data 52 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03599 RNA polymerase-associated protein RapA strong 52 99
o Escherichia coli BW25113 b0059 hepA ATP-dependent helicase HepA (NCBI) strong 52 99
o Escherichia coli ECOR38 HEPCGN_08790 rapA RNA polymerase-associated protein RapA cofit 52 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF183 RNA polymerase associated protein RapA (EC 3.6.1.-) cofit 52 99
o Erwinia tracheiphila SCR3 LU632_RS02805 rapA RNA polymerase-associated protein RapA insig. 51 99
o Enterobacter sp. TBS_079 MPMX20_00753 RNA polymerase-associated protein RapA strong 52 99
o Pantoea sp. MT58 IAI47_16055 RNA polymerase-associated protein RapA cofit 52 99
o Klebsiella michiganensis M5al BWI76_RS04570 RNA polymerase-associated protein RapA strong 52 99
o Rahnella sp. WP5 EX31_RS03745 RNA polymerase-associated protein RapA cofit 52 99
o Enterobacter asburiae PDN3 EX28DRAFT_3651 Superfamily II DNA/RNA helicases, SNF2 family cofit 52 99
o Serratia liquefaciens MT49 IAI46_03275 RNA polymerase-associated protein RapA insig. 52 99
o Shewanella sp. ANA-3 Shewana3_0574 ATP-dependent helicase HepA (RefSeq) sig. 51 99
o Pectobacterium carotovorum WPP14 HER17_RS02990 RNA polymerase-associated protein RapA cofit 53 99
o Dickeya dianthicola 67-19 HGI48_RS18170 RNA polymerase-associated protein RapA cofit 52 99
o Dickeya dadantii 3937 DDA3937_RS18235 RNA polymerase-associated protein RapA sig. 52 99
o Dickeya dianthicola ME23 DZA65_RS19310 RNA polymerase-associated protein RapA cofit 52 99
o Shewanella oneidensis MR-1 SO0575 hepA RNA polymerase-associated protein HepA (NCBI ptt file) sig. 51 99
o Erwinia amylovora T8 OLJFJH_01340 RNA polymerase-associated protein RapA strong 50 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_12705 RNA polymerase-associated protein RapA insig. 51 99
o Shewanella loihica PV-4 Shew_0457 ATP-dependent helicase HepA (RefSeq) sig. 50 99
o Shewanella amazonensis SB2B Sama_3131 ATP-dependent helicase HepA (RefSeq) sig. 50 99
o Marinobacter adhaerens HP15 HP15_3376 RNA polymerase-associated protein RapA strong 48 100
o Alteromonas macleodii MIT1002 MIT1002_00659 RNA polymerase-associated protein RapA cofit 47 99
o Acinetobacter radioresistens SK82 MPMX26_01027 RNA polymerase-associated protein RapA strong 46 100
o Rhodanobacter sp. FW510-T8 OKGIIK_09865 rapA RNA polymerase-associated protein RapA cofit 43 100
o Rhodanobacter denitrificans MT42 LRK55_RS02635 RNA polymerase-associated protein RapA strong 43 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02885 RNA polymerase-associated protein RapA strong 43 100
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS07105 RNA polymerase-associated protein RapA insig. 43 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS09245 RNA polymerase-associated protein RapA sig. 43 99
  Sinorhizobium meliloti 1021 SMc02152 helicase insig. 35 19
  Pseudomonas sp. S08-1 OH686_23015 hypothetical protein insig. 31 25
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01985 DISARM system SNF2-like helicase DrmD insig. 27 44
  Enterobacter sp. TBS_079 MPMX20_00569 RNA polymerase-associated protein RapA insig. 38 17
  Rhodopseudomonas palustris CGA009 TX73_011450 helicase-related protein insig. 34 19
  Kangiella aquimarina DSM 16071 B158DRAFT_1267 Superfamily II DNA/RNA helicases, SNF2 family insig. 37 18
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.688.1 helicase (Snf2/Rad54 family) no data 35 22
  Azospirillum brasilense Sp245 AZOBR_RS30290 RNA helicase insig. 28 26
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_6015 RNA polymerase associated protein RapA (EC 3.6.1.-) insig. 36 23
  Castellaniella sp019104865 MT123 ABCV34_RS02050 helicase-related protein cofit 33 20
  Paraburkholderia sabiae LMG 24235 QEN71_RS00695 DEAD/DEAH box helicase cofit 36 17
  Paraburkholderia graminis OAS925 ABIE53_003106 superfamily II DNA or RNA helicase insig. 36 17
  Escherichia coli ECRC100 OKFHMN_11670 hepA helicase cofit 32 17
  Escherichia coli ECRC101 MCAODC_02185 hepA helicase strong 32 17
  Escherichia coli ECRC102 NIAGMN_09520 hepA helicase insig. 32 17
  Escherichia coli ECRC98 JDDGAC_15270 hepA helicase cofit 32 17
  Escherichia coli ECRC62 BNILDI_09545 hepA helicase cofit 32 17
  Escherichia coli ECRC99 KEDOAH_16475 hepA helicase no data 32 17
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14095 hypothetical protein insig. 25 47
  Pseudomonas sp. S08-1 OH686_23015 hypothetical protein insig. 34 14
  Rhodopseudomonas palustris CGA009 TX73_011450 helicase-related protein insig. 37 11
  Bosea sp. OAE506 ABIE41_RS19075 DISARM system SNF2-like helicase DrmD insig. 31 17
  Sinorhizobium meliloti 1021 SMc02152 helicase insig. 33 11
  Azospirillum brasilense Sp245 AZOBR_RS30290 RNA helicase insig. 35 11
  Kangiella aquimarina DSM 16071 B158DRAFT_1267 Superfamily II DNA/RNA helicases, SNF2 family insig. 42 7
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.688.1 helicase (Snf2/Rad54 family) no data 52 5
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04222 ATP-dependent RNA helicase RhlE sig. 35 12
  Paraburkholderia graminis OAS925 ABIE53_003462 ATP-dependent RNA helicase RhlE sig. 35 12
  Paraburkholderia sabiae LMG 24235 QEN71_RS00695 DEAD/DEAH box helicase cofit 35 12
  Escherichia coli ECRC100 OKFHMN_11670 hepA helicase cofit 36 8
  Escherichia coli ECRC101 MCAODC_02185 hepA helicase strong 36 8
  Escherichia coli ECRC102 NIAGMN_09520 hepA helicase insig. 36 8
  Escherichia coli ECRC62 BNILDI_09545 hepA helicase cofit 36 8
  Escherichia coli ECRC98 JDDGAC_15270 hepA helicase cofit 36 8
  Escherichia coli ECRC99 KEDOAH_16475 hepA helicase no data 36 8
  Vibrio cholerae E7946 ATCC 55056 CSW01_19065 ATP-dependent helicase insig. 33 13
  Paraburkholderia sabiae LMG 24235 QEN71_RS02265 DEAD/DEAH box helicase strong 33 12
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_6015 RNA polymerase associated protein RapA (EC 3.6.1.-) insig. 26 14
  Castellaniella sp019104865 MT123 ABCV34_RS02050 helicase-related protein cofit 33 12
  Burkholderia phytofirmans PsJN BPHYT_RS16445 RNA helicase strong 33 12
  Bacteroides ovatus ATCC 8483 BACOVA_05421 helicase C-terminal domain protein insig. 26 17
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14945 helicase insig. 28 12
  Pseudomonas aeruginosa PA14 IKLFDK_23155 ATP-dependent RNA helicase DbpA insig. 23 14