Homologs of Echvi_3600 from Echinicola vietnamensis KMM 6221, DSM 17526

Superfamily II DNA and RNA helicases
SEED: DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3600 Superfamily II DNA and RNA helicases sig. 100 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04900 DEAD/DEAH box helicase cofit 61 82
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21770 ATP-dependent RNA helicase insig. 60 79
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_01640 DEAD/DEAH box helicase sig. 50 93
o Bacteroides stercoris CC31F HMPREF1181_RS14365 DEAD/DEAH box helicase insig. 49 92
o Phocaeicola dorei CL03T12C01 ABI39_RS16490 DEAD/DEAH box helicase strong 50 90
o Bacteroides ovatus ATCC 8483 BACOVA_02566 DEAD/DEAH box helicase insig. 52 87
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS01240 DEAD/DEAH box helicase sig. 49 95
o Bacteroides thetaiotaomicron VPI-5482 BT0831 ATP-dependent RNA helicase (NCBI ptt file) strong 51 86
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS00340 DEAD/DEAH box helicase strong 47 92
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01200 DEAD/DEAH box helicase insig. 44 80
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16115 DEAD/DEAH box helicase sig. 42 80
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16030 DEAD/DEAH box helicase insig. 43 80
  Shewanella loihica PV-4 Shew_2800 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 41 87
  Phocaeicola dorei CL03T12C01 ABI39_RS02170 DEAD/DEAH box helicase insig. 42 88
  Shewanella loihica PV-4 Shew_2777 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 37 98
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02855 DEAD/DEAH box helicase sig. 43 80
  Shewanella oneidensis MR-1 SO2571 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 41 80
  Enterobacter sp. TBS_079 MPMX20_01425 ATP-dependent RNA helicase RhlE insig. 40 81
  Shewanella sp. ANA-3 Shewana3_2376 DEAD/DEAH box helicase domain-containing protein (RefSeq) cofit 38 88
  Ralstonia solanacearum PSI07 RPSI07_RS21325 RNA helicase sig. 39 90
  Erwinia tracheiphila SCR3 LU632_RS21030 DEAD/DEAH family ATP-dependent RNA helicase no data 41 81
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF696 ATP-dependent RNA helicase RhlE insig. 40 81
  Ralstonia solanacearum GMI1000 RS_RS02695 RNA helicase sig. 39 90
  Enterobacter asburiae PDN3 EX28DRAFT_2194 Superfamily II DNA and RNA helicases insig. 40 81
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05910 RNA helicase strong 42 78
  Paraburkholderia sabiae LMG 24235 QEN71_RS02265 DEAD/DEAH box helicase strong 41 84
  Klebsiella michiganensis M5al BWI76_RS08915 ATP-dependent RNA helicase RhlE sig. 40 81
  Cupriavidus basilensis FW507-4G11 RR42_RS02870 RNA helicase sig. 41 81
  Pantoea sp. MT58 IAI47_16990 DEAD/DEAH family ATP-dependent RNA helicase strong 40 81
  Escherichia coli BL21 ECD_00764 ATP-dependent RNA helicase insig. 40 81
  Escherichia fergusonii Becca EFB2_03308 ATP-dependent RNA helicase RhlE insig. 40 81
  Escherichia coli ECOR27 NOLOHH_22645 rhlE ATP-dependent RNA helicase RhlE cofit 40 81
  Escherichia coli ECOR38 HEPCGN_01750 rhlE ATP-dependent RNA helicase RhlE cofit 40 81
  Escherichia coli ECRC100 OKFHMN_06290 rhlE ATP-dependent RNA helicase RhlE cofit 40 81
  Escherichia coli ECRC101 MCAODC_25505 rhlE ATP-dependent RNA helicase RhlE cofit 40 81
  Escherichia coli ECRC102 NIAGMN_04335 rhlE ATP-dependent RNA helicase RhlE insig. 40 81
  Escherichia coli ECRC62 BNILDI_20925 rhlE ATP-dependent RNA helicase RhlE insig. 40 81
  Escherichia coli ECRC98 JDDGAC_09925 rhlE ATP-dependent RNA helicase RhlE cofit 40 81
  Escherichia coli ECRC99 KEDOAH_21620 rhlE ATP-dependent RNA helicase RhlE no data 40 81
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02916 ATP-dependent RNA helicase RhlE insig. 40 81
  Escherichia coli Nissle 1917 ECOLIN_RS04245 ATP-dependent RNA helicase RhlE insig. 40 81
  Escherichia coli BW25113 b0797 rhlE RNA helicase (NCBI) sig. 40 81
  Ralstonia sp. UNC404CL21Col ABZR87_RS07850 DEAD/DEAH box helicase sig. 41 81
  Bosea sp. OAE506 ABIE41_RS22380 DEAD/DEAH box helicase insig. 41 83
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11875 RNA helicase strong 41 81
  Ralstonia solanacearum UW163 UW163_RS01715 RNA helicase insig. 41 81
  Dickeya dadantii 3937 DDA3937_RS03100 DEAD/DEAH family ATP-dependent RNA helicase insig. 40 81
  Shewanella oneidensis MR-1 SO1383 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) strong 40 81
  Dickeya dianthicola 67-19 HGI48_RS03275 DEAD/DEAH family ATP-dependent RNA helicase insig. 40 81
  Dickeya dianthicola ME23 DZA65_RS03270 DEAD/DEAH family ATP-dependent RNA helicase no data 40 81
  Vibrio cholerae E7946 ATCC 55056 CSW01_07055 ATP-dependent helicase insig. 40 80
  Erwinia tracheiphila SCR3 LU632_RS09215 rhlE ATP-dependent RNA helicase RhlE cofit 39 81
  Pseudomonas simiae WCS417 PS417_08540 RNA helicase strong 41 82
  Shewanella loihica PV-4 Shew_1454 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 39 82
  Shewanella sp. ANA-3 Shewana3_2988 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 39 81
  Pectobacterium carotovorum WPP14 HER17_RS13325 ATP-dependent RNA helicase RhlE insig. 38 80
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02200 DEAD/DEAH box helicase insig. 41 80
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_265 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) no data 41 82
  Pseudomonas fluorescens FW300-N2E3 AO353_19130 RNA helicase no data 41 82
  Enterobacter asburiae PDN3 EX28DRAFT_3211 Superfamily II DNA and RNA helicases no data 40 81
  Serratia liquefaciens MT49 IAI46_01970 DEAD/DEAH family ATP-dependent RNA helicase cofit 40 81
  Rhodopseudomonas palustris CGA009 TX73_019020 DEAD/DEAH box helicase insig. 35 98
  Shewanella oneidensis MR-1 SO3783 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 35 94
  Alteromonas macleodii MIT1002 MIT1002_03342 ATP-dependent RNA helicase RhlE insig. 40 81
  Pseudomonas fluorescens SBW25 PFLU_RS08490 DEAD/DEAH box helicase no data 41 82
  Pseudomonas fluorescens SBW25-INTG PFLU_RS08490 DEAD/DEAH box helicase strong 41 82
  Rahnella sp. WP5 EX31_RS08510 DEAD/DEAH family ATP-dependent RNA helicase insig. 39 81
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0511 Superfamily II DNA and RNA helicases insig. 44 75
  Pseudomonas fluorescens FW300-N2C3 AO356_03110 RNA helicase no data 40 82
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2450 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) no data 40 82
  Pectobacterium carotovorum WPP14 HER17_RS18175 DEAD/DEAH family ATP-dependent RNA helicase insig. 40 81
  Klebsiella michiganensis M5al BWI76_RS25055 DEAD/DEAH family ATP-dependent RNA helicase no data 40 81
  Enterobacter sp. TBS_079 MPMX20_04066 ATP-dependent RNA helicase DeaD insig. 39 81
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS09210 DEAD/DEAH box helicase no data 39 89
  Bacteroides stercoris CC31F HMPREF1181_RS03715 DEAD/DEAH box helicase insig. 41 80
  Azospirillum sp. SherDot2 MPMX19_00976 ATP-dependent RNA helicase RhlE insig. 39 80
  Dickeya dianthicola ME23 DZA65_RS09075 ATP-dependent RNA helicase RhlE insig. 38 81
  Dickeya dianthicola 67-19 HGI48_RS08785 ATP-dependent RNA helicase RhlE cofit 35 95
  Burkholderia phytofirmans PsJN BPHYT_RS16445 RNA helicase strong 41 80
  Rhodanobacter denitrificans MT42 LRK55_RS02405 DEAD/DEAH box helicase cofit 41 82
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02650 DEAD/DEAH box helicase insig. 41 82
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04222 ATP-dependent RNA helicase RhlE sig. 41 80
  Pseudomonas sp. S08-1 OH686_22545 DEAD-box ATP-dependent RNA helicase DeaD ( CshA) cofit 41 81
  Dechlorosoma suillum PS Dsui_0309 DNA/RNA helicase, superfamily II insig. 39 84
  Shewanella amazonensis SB2B Sama_0383 ATP-dependent RNA helicase RhlE (RefSeq) insig. 39 80
  Bacteroides thetaiotaomicron VPI-5482 BT1885 putative ATP-dependent RNA helicase (NCBI ptt file) strong 40 80
  Paraburkholderia graminis OAS925 ABIE53_003462 ATP-dependent RNA helicase RhlE sig. 40 80
  Dickeya dadantii 3937 DDA3937_RS08645 ATP-dependent RNA helicase RhlE sig. 38 81
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14745 DEAD/DEAH box helicase no data 41 81
  Herbaspirillum seropedicae SmR1 HSERO_RS17855 DEAD/DEAH box helicase sig. 36 95
  Magnetospirillum magneticum AMB-1 AMB_RS07215 ATP-dependent helicase insig. 36 97
  Serratia liquefaciens MT49 IAI46_06620 ATP-dependent RNA helicase RhlE insig. 39 81
  Escherichia coli ECOR27 NOLOHH_09955 deaD ATP-dependent RNA helicase DeaD insig. 39 81
  Escherichia coli ECOR38 HEPCGN_17030 deaD ATP-dependent RNA helicase DeaD strong 39 81
  Escherichia coli ECRC100 OKFHMN_18155 deaD ATP-dependent RNA helicase DeaD cofit 39 81
  Escherichia coli ECRC101 MCAODC_08675 deaD ATP-dependent RNA helicase DeaD cofit 39 81
  Escherichia coli ECRC102 NIAGMN_15915 deaD ATP-dependent RNA helicase DeaD insig. 39 81
  Escherichia coli ECRC98 JDDGAC_21780 deaD ATP-dependent RNA helicase DeaD cofit 39 81
  Castellaniella sp019104865 MT123 ABCV34_RS07925 DEAD/DEAH box helicase cofit 39 88