Homologs of EX31_RS07155 from Rahnella sp. WP5

exoribonuclease II
SEED: Exoribonuclease II (EC 3.1.13.1)
KEGG: exoribonuclease II

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rahnella sp. WP5 EX31_RS07155 exoribonuclease II insig. 100 100
o Pectobacterium carotovorum WPP14 HER17_RS09430 exoribonuclease II strong 77 100
o Serratia liquefaciens MT49 IAI46_13870 exoribonuclease II cofit 78 100
o Dickeya dadantii 3937 DDA3937_RS12490 exoribonuclease II strong 75 100
o Dickeya dianthicola ME23 DZA65_RS12995 exoribonuclease II sig. 75 100
o Dickeya dianthicola 67-19 HGI48_RS12545 exoribonuclease II cofit 75 100
o Klebsiella michiganensis M5al BWI76_RS11990 exoribonuclease II sig. 73 100
o Enterobacter asburiae PDN3 EX28DRAFT_0961 exoribonuclease II cofit 72 100
o Enterobacter sp. TBS_079 MPMX20_02487 Exoribonuclease 2 strong 72 100
o Pantoea sp. MT58 IAI47_09320 exoribonuclease II sig. 73 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2698 Exoribonuclease II (EC 3.1.13.1) strong 72 100
o Escherichia coli Nissle 1917 ECOLIN_RS07765 exoribonuclease II no data 71 100
o Erwinia tracheiphila SCR3 LU632_RS12255 exoribonuclease II no data 72 100
o Escherichia fergusonii Becca EFB2_02638 Exoribonuclease 2 sig. 71 100
o Escherichia coli ECOR27 NOLOHH_20185 rnb exoribonuclease II no data 71 100
o Escherichia coli ECOR38 HEPCGN_25680 rnb exoribonuclease II strong 71 100
o Escherichia coli BW25113 b1286 rnb exoribonuclease II (NCBI) strong 71 100
o Escherichia coli ECRC101 OKFHMN_02520 rnb exoribonuclease II no data 71 100
o Escherichia coli ECRC101 MCAODC_15750 rnb exoribonuclease II strong 71 100
o Escherichia coli ECRC102 NIAGMN_26690 rnb exoribonuclease II no data 71 100
o Escherichia coli ECRC98 JDDGAC_05065 rnb exoribonuclease II no data 71 100
o Escherichia coli ECRC99 KEDOAH_26245 rnb exoribonuclease II no data 71 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02395 Exoribonuclease 2 sig. 71 100
o Escherichia coli ECRC62 BNILDI_18335 rnb exoribonuclease II sig. 71 100
o Escherichia coli BL21 ECD_01263 ribonuclease II cofit 70 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_18190 exoribonuclease 2 insig. 51 100
  Marinobacter adhaerens HP15 HP15_3552 exoribonuclease R strong 33 90
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3370.1 3'-to-5' exoribonuclease RNase R strong 33 87
  Lysobacter sp. OAE881 ABIE51_RS07475 ribonuclease R cofit 33 87
  Dechlorosoma suillum PS Dsui_3128 ribonuclease R cofit 30 91
  Rhodanobacter denitrificans MT42 LRK55_RS00235 ribonuclease R strong 29 96
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00495 ribonuclease R strong 29 96
  Alteromonas macleodii MIT1002 MIT1002_03606 Ribonuclease R cofit 29 98
  Pseudomonas putida KT2440 PP_4880 exoribonuclease R strong 30 96
  Rhodanobacter sp. FW510-T8 OKGIIK_06755 rnr ribonuclease R strong 29 96
  Pseudomonas simiae WCS417 PS417_02555 exoribonuclease R strong 30 96
  Pseudomonas fluorescens FW300-N2C3 AO356_08610 exoribonuclease R strong 30 96
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3607 3'-to-5' exoribonuclease RNase R strong 30 96
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08270 ribonuclease R strong 28 96
  Shewanella oneidensis MR-1 SO3935 vacB ribonuclease R (NCBI ptt file) strong 28 96
  Enterobacter asburiae PDN3 EX28DRAFT_3376 ribonuclease R strong 29 96
  Pseudomonas fluorescens SBW25 PFLU_RS02625 ribonuclease R cofit 30 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS02625 ribonuclease R strong 30 96
  Shewanella loihica PV-4 Shew_3289 ribonuclease R (RefSeq) strong 29 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS22925 ribonuclease R strong 28 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00712 RNAse R strong 28 97
  Pseudomonas stutzeri RCH2 Psest_0691 ribonuclease R strong 29 96
  Paraburkholderia graminis OAS925 ABIE53_001940 ribonuclease R strong 28 97
  Klebsiella michiganensis M5al BWI76_RS02575 exoribonuclease R sig. 28 96
  Burkholderia phytofirmans PsJN BPHYT_RS08455 ribonuclease R sig. 28 97
  Kangiella aquimarina DSM 16071 B158DRAFT_1989 ribonuclease R cofit 27 99
  Pseudomonas sp. RS175 PFR28_05130 Ribonuclease R strong 29 96
  Pseudomonas syringae pv. syringae B728a Psyr_0579 RNAse R strong 29 96
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0579 RNAse R strong 29 96
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1403 3'-to-5' exoribonuclease RNase R strong 28 96
  Shewanella sp. ANA-3 Shewana3_0697 RNAse R (RefSeq) strong 28 96
  Escherichia coli Nissle 1917 ECOLIN_RS24265 ribonuclease R cofit 29 96
  Marinobacter adhaerens HP15 HP15_622 exoribonuclease R strong 28 96
  Enterobacter sp. TBS_079 MPMX20_00460 Ribonuclease R sig. 28 96
  Pseudomonas fluorescens GW456-L13 PfGW456L13_144 3'-to-5' exoribonuclease RNase R strong 28 96
  Pantoea sp. MT58 IAI47_02625 ribonuclease R sig. 28 96
  Pseudomonas sp. S08-1 OH686_15910 ribonuclease R cofit 28 96
  Escherichia coli BL21 ECD_04046 exoribonuclease R, RNase R insig. 28 96
  Escherichia coli BW25113 b4179 vacB putative enzyme (VIMSS) strong 28 96
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF832 '3'-to-5' exoribonuclease RNase R' transl_table=11 strong 28 96
  Shewanella amazonensis SB2B Sama_3067 exoribonuclease II (RefSeq) strong 28 96
  Pseudomonas fluorescens FW300-N2E3 AO353_13200 exoribonuclease R strong 28 96
  Escherichia coli ECRC101 OKFHMN_12220 rnr ribonuclease R insig. 28 96
  Escherichia coli ECRC101 MCAODC_02735 rnr ribonuclease R insig. 28 96
  Escherichia coli ECRC102 NIAGMN_10070 rnr ribonuclease R insig. 28 96
  Escherichia coli ECRC98 JDDGAC_15860 rnr ribonuclease R no data 28 96
  Escherichia coli ECRC99 KEDOAH_15935 rnr ribonuclease R no data 28 96
  Dickeya dadantii 3937 DDA3937_RS17260 ribonuclease R sig. 28 96
  Escherichia fergusonii Becca EFB2_04356 Ribonuclease R insig. 28 96
  Escherichia coli ECOR27 NOLOHH_04485 rnr ribonuclease R cofit 28 96
  Escherichia coli ECRC62 BNILDI_07005 rnr ribonuclease R insig. 28 96
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03863 Ribonuclease R cofit 28 96
  Escherichia coli ECOR38 HEPCGN_10450 rnr ribonuclease R cofit 28 96
  Dickeya dianthicola 67-19 HGI48_RS17315 ribonuclease R cofit 29 96
  Dickeya dianthicola ME23 DZA65_RS18405 ribonuclease R insig. 29 96
  Serratia liquefaciens MT49 IAI46_01660 ribonuclease R insig. 27 96
  Ralstonia solanacearum GMI1000 RS_RS06155 ribonuclease R strong 27 98
  Ralstonia sp. UNC404CL21Col ABZR87_RS10985 ribonuclease R sig. 28 97
  Erwinia tracheiphila SCR3 LU632_RS21750 rnr ribonuclease R cofit 27 96
  Acinetobacter radioresistens SK82 MPMX26_02684 Ribonuclease R cofit 27 99
  Rahnella sp. WP5 EX31_RS08785 ribonuclease R insig. 27 96
  Castellaniella sp019104865 MT123 ABCV34_RS06625 ribonuclease R cofit 27 98
  Vibrio cholerae E7946 ATCC 55056 CSW01_13155 ribonuclease R cofit 26 96
  Ralstonia solanacearum PSI07 RPSI07_RS18030 ribonuclease R strong 27 98
  Pectobacterium carotovorum WPP14 HER17_RS03835 ribonuclease R cofit 28 96
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15345 ribonuclease R strong 27 98
  Ralstonia solanacearum UW163 UW163_RS12810 ribonuclease R insig. 27 98
  Rhodopseudomonas palustris CGA009 TX73_016160 ribonuclease R insig. 33 69
  Rhizobium sp. OAE497 ABIE40_RS07350 ribonuclease R insig. 31 69
  Cupriavidus basilensis FW507-4G11 RR42_RS13065 ribonuclease R strong 27 97
  Herbaspirillum seropedicae SmR1 HSERO_RS09290 ribonuclease R strong 27 96
  Azospirillum brasilense Sp245 AZOBR_RS16165 ribonuclease R insig. 34 70
  Phaeobacter inhibens DSM 17395 PGA1_c36430 putative ribonuclease R strong 30 87
  Agrobacterium fabrum C58 Atu1303 exoribonuclease sig. 31 69
  Acidovorax sp. GW101-3H11 Ac3H11_412 3'-to-5' exoribonuclease RNase R strong 29 81