| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_14430 | | LysR family transcriptional regulator | insig. | 100 | 100 |
| | Shewanella oneidensis MR-1 | SO0369 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 33 | 98 |
| | Shewanella sp. ANA-3 | Shewana3_3800 | | LysR family transcriptional regulator (RefSeq) | insig. | 33 | 100 |
| | Pseudomonas segetis P6 | ACVTMO_RS15295 | | LysR family transcriptional regulator | insig. | 35 | 97 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21915 | | LysR family transcriptional regulator | strong | 33 | 98 |
| | Dinoroseobacter shibae DFL-12 | Dshi_0123 | | transcriptional regulator, LysR family (RefSeq) | sig. | 31 | 99 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS07535 | | LysR family transcriptional regulator | strong | 33 | 97 |
| | Shewanella loihica PV-4 | Shew_1128 | | LysR family transcriptional regulator (RefSeq) | strong | 31 | 98 |
| | Pseudomonas sp. S08-1 | OH686_04560 | | Transcriptional regulator, LysR family | cofit | 33 | 98 |
| | Serratia liquefaciens MT49 | IAI46_16195 | | LysR family transcriptional regulator | insig. | 33 | 98 |
| | Azospirillum sp. SherDot2 | MPMX19_05002 | | HTH-type transcriptional regulator DmlR | insig. | 32 | 98 |
| | Shewanella amazonensis SB2B | Sama_2485 | | LysR family transcriptional regulator (RefSeq) | strong | 31 | 98 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS15410 | | LysR family transcriptional regulator | cofit | 30 | 97 |
| | Shewanella loihica PV-4 | Shew_2278 | | LysR family transcriptional regulator (RefSeq) | insig. | 32 | 97 |
| | Paraburkholderia graminis OAS925 | ABIE53_002928 | | DNA-binding transcriptional LysR family regulator | strong | 33 | 100 |
| | Shewanella oneidensis MR-1 | SO3363 | | transcriptional regulator, LysR family (NCBI ptt file) | strong | 30 | 98 |
| | Shewanella sp. ANA-3 | Shewana3_1186 | | LysR family transcriptional regulator (RefSeq) | strong | 30 | 98 |
| | Klebsiella michiganensis M5al | BWI76_RS05415 | | LysR family transcriptional regulator | sig. | 33 | 94 |
| | Rhodospirillum rubrum S1H | Rru_A1041 | | Transcriptional Regulator, LysR family (NCBI) | insig. | 31 | 97 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c29160 | | HTH-type transcriptional regulator, LysR family | insig. | 29 | 100 |
| o | Dechlorosoma suillum PS | Dsui_1006 | | transcriptional regulator | insig. | 33 | 98 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01740 | | HTH-type transcriptional regulator DmlR | insig. | 31 | 98 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2687 | | Transcriptional regulator | insig. | 33 | 96 |
| | Enterobacter sp. TBS_079 | MPMX20_00892 | | HTH-type transcriptional regulator DmlR | insig. | 33 | 96 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2357 | | transcriptional regulator, LysR family | insig. | 31 | 96 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2357 | | transcriptional regulator, LysR family | insig. | 31 | 96 |
| | Shewanella sp. ANA-3 | Shewana3_1836 | | LysR family transcriptional regulator (RefSeq) | insig. | 30 | 97 |
| | Pseudomonas segetis P6 | ACVTMO_RS17005 | | LysR substrate-binding domain-containing protein | insig. | 31 | 98 |
| | Rhizobium sp. OAE497 | ABIE40_RS06595 | | LysR family transcriptional regulator | insig. | 30 | 95 |
| | Serratia liquefaciens MT49 | IAI46_03125 | | LysR family transcriptional regulator | insig. | 32 | 98 |
| | Dickeya dadantii 3937 | DDA3937_RS03655 | | LysR family transcriptional regulator | insig. | 34 | 95 |
| | Pseudomonas sp. DMC3 | GFF4388 | | HTH-type transcriptional regulator DmlR | cofit | 32 | 96 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS03985 | | LysR family transcriptional regulator | insig. | 29 | 97 |
| | Dickeya dadantii 3937 | DDA3937_RS01465 | | HTH-type transcriptional activator AaeR | insig. | 32 | 97 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03453 | | HTH-type transcriptional regulator DmlR | insig. | 32 | 96 |
| | Pantoea sp. MT58 | IAI47_01190 | | LysR family transcriptional regulator | insig. | 32 | 97 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS17035 | | LysR family transcriptional regulator | insig. | 32 | 95 |
| | Ralstonia solanacearum UW163 | UW163_RS18425 | | LysR family transcriptional regulator | insig. | 32 | 95 |
| | Pseudomonas stutzeri RCH2 | Psest_2817 | | Transcriptional regulator | insig. | 31 | 98 |
| | Pseudomonas sp. RS175 | PFR28_01198 | | HTH-type transcriptional regulator DmlR | insig. | 31 | 97 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_19415 | | LysR family transcriptional regulator | insig. | 29 | 99 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS21445 | | LysR family transcriptional regulator | insig. | 32 | 97 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS27080 | | LysR family transcriptional regulator | sig. | 31 | 100 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS31615 | | LysR family transcriptional regulator | insig. | 31 | 100 |
| | Escherichia coli ECOR27 | NOLOHH_02345 | yafC | DNA-binding transcriptional regulator YafC | insig. | 31 | 96 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_14945 | lysR | LysR family transcriptional regulator | insig. | 30 | 97 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS20745 | | LysR family transcriptional regulator | insig. | 32 | 97 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS15810 | | LysR family transcriptional regulator | insig. | 33 | 99 |
| | Ralstonia solanacearum GMI1000 | RS_RS11675 | | LysR family transcriptional regulator | insig. | 32 | 96 |
| | Variovorax sp. SCN45 | GFF4333 | | Transcriptional regulator, LysR family | insig. | 31 | 98 |
| | Shewanella oneidensis MR-1 | SO2053 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 30 | 95 |
| | Pseudomonas sp. RS175 | PFR28_00753 | | HTH-type transcriptional regulator DmlR | insig. | 30 | 99 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4039 | | LysR family transcriptional regulator YafC | insig. | 33 | 97 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_24745 | | LysR family transcriptional regulator | sig. | 31 | 100 |
| | Dickeya dianthicola ME23 | DZA65_RS14665 | | LysR family transcriptional regulator | insig. | 30 | 98 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS07880 | | LysR family transcriptional regulator | cofit | 30 | 97 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS08130 | | LysR family transcriptional regulator | insig. | 30 | 97 |
| | Rahnella sp. WP5 | EX31_RS12270 | | HTH-type transcriptional activator AaeR | insig. | 32 | 97 |
| | Alteromonas macleodii MIT1002 | MIT1002_03088 | | D-malate degradation protein R | insig. | 29 | 98 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01123 | | transcriptional regulator, LysR family | insig. | 32 | 86 |
| | Escherichia coli ECRC100 | OKFHMN_10000 | yafC | DNA-binding transcriptional regulator YafC | cofit | 32 | 96 |
| | Escherichia coli ECRC101 | MCAODC_00515 | yafC | DNA-binding transcriptional regulator YafC | insig. | 32 | 96 |
| | Escherichia coli ECRC102 | NIAGMN_07850 | yafC | DNA-binding transcriptional regulator YafC | insig. | 32 | 96 |
| | Escherichia coli ECRC98 | JDDGAC_13595 | yafC | DNA-binding transcriptional regulator YafC | insig. | 32 | 96 |
| | Escherichia coli ECRC99 | KEDOAH_18155 | yafC | DNA-binding transcriptional regulator YafC | no data | 32 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS13765 | | LysR family transcriptional regulator | insig. | 32 | 98 |
| | Pseudomonas segetis P6 | ACVTMO_RS22150 | | LysR family transcriptional regulator | insig. | 31 | 98 |
| | Escherichia coli BL21 | ECD_00201 | | LysR family putative transcriptional regulator | insig. | 31 | 96 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS23170 | | LysR family transcriptional regulator | insig. | 31 | 94 |
| | Pseudomonas sp. S08-1 | OH686_18145 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 30 | 95 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_11955 | | LysR family transcriptional regulator | insig. | 29 | 96 |
| | Escherichia coli ECOR38 | HEPCGN_07940 | yafC | DNA-binding transcriptional regulator YafC | insig. | 31 | 96 |
| | Pseudomonas simiae WCS417 | PS417_09485 | | LysR family transcriptional regulator | insig. | 30 | 99 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS18625 | | LysR family transcriptional regulator | sig. | 29 | 96 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS59835 | | LysR family transcriptional regulator | insig. | 29 | 96 |
| | Pseudomonas sp. SVBP6 | COO64_RS26735 | | LysR family transcriptional regulator | insig. | 32 | 87 |
| | Escherichia coli ECRC62 | BNILDI_09325 | yafC | DNA-binding transcriptional regulator YafC | insig. | 31 | 96 |
| | Escherichia coli BW25113 | b0208 | yafC | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 31 | 96 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS07990 | | LysR family transcriptional regulator | insig. | 31 | 98 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS07990 | | LysR family transcriptional regulator | insig. | 31 | 98 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10570 | | LysR family transcriptional regulator | strong | 33 | 86 |
| | Enterobacter sp. TBS_079 | MPMX20_04149 | | HTH-type transcriptional regulator DmlR | insig. | 32 | 97 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3294 | | Transcriptional regulator | insig. | 32 | 97 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS02080 | | LysR family transcriptional regulator | insig. | 31 | 98 |
| | Shewanella loihica PV-4 | Shew_1539 | | LysR family transcriptional regulator (RefSeq) | insig. | 29 | 98 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS08890 | | LysR family transcriptional regulator | cofit | 32 | 96 |
| | Escherichia fergusonii Becca | EFB2_03835 | | HTH-type transcriptional regulator DmlR | insig. | 31 | 96 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS01140 | | DNA-binding transcriptional regulator YafC | insig. | 31 | 96 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS32790 | | LysR family transcriptional regulator | insig. | 31 | 99 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_15635 | | LysR family transcriptional regulator | insig. | 30 | 96 |
| | Pseudomonas sp. BP01 | JOY50_RS26935 | | LysR substrate-binding domain-containing protein | insig. | 30 | 94 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_23240 | | LysR family transcriptional regulator | insig. | 30 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_03837 | | HTH-type transcriptional regulator PgrR | insig. | 29 | 98 |
| | Pantoea sp. MT58 | IAI47_16730 | | LysR family transcriptional regulator | insig. | 32 | 96 |
| | Dickeya dianthicola 67-19 | HGI48_RS01385 | | HTH-type transcriptional activator AaeR | insig. | 32 | 97 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS02805 | | LysR family transcriptional regulator | insig. | 31 | 99 |
| | Dickeya dianthicola ME23 | DZA65_RS01445 | | HTH-type transcriptional activator AaeR | insig. | 32 | 97 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS01435 | | LysR family transcriptional regulator | strong | 30 | 98 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1366 | | transcriptional regulator, LysR family | insig. | 30 | 96 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1366 | | transcriptional regulator, LysR family | insig. | 30 | 96 |