Homologs of CA265_RS23010 from Pedobacter sp. GW460-11-11-14-LB5

hydrophobe/amphiphile efflux-1 family RND transporter
SEED: RND efflux system, inner membrane transporter CmeB
KEGG: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23010 hydrophobe/amphiphile efflux-1 family RND transporter strong 100 100
o Bacteroides thetaiotaomicron VPI-5482 BT3338 RND efflux system for fusidic acid, chlorpromazine, and thioridazine, inner membrane component (from data) strong 57 99
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS13660 efflux RND transporter permease subunit cofit 58 99
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02100 efflux RND transporter permease subunit strong 57 100
o Phocaeicola dorei CL03T12C01 ABI39_RS01285 efflux RND transporter permease subunit cofit 57 100
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12545 efflux RND transporter permease subunit cofit 56 99
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00675 efflux RND transporter permease subunit insig. 53 100
o Bacteroides stercoris CC31F HMPREF1181_RS02360 efflux RND transporter permease subunit cofit 54 99
  Phocaeicola dorei CL03T12C01 ABI39_RS08280 efflux RND transporter permease subunit insig. 53 100
o Bacteroides ovatus ATCC 8483 BACOVA_01389 RND transporter, HAE1 family insig. 54 97
  Bacteroides thetaiotaomicron VPI-5482 BT1966 multidrug resistance protein, AcrB/AcrD family (NCBI ptt file) insig. 54 97
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01360 efflux RND transporter permease subunit insig. 53 99
  Bacteroides thetaiotaomicron VPI-5482 BT2941 multidrug resistance protein mexB (multidrug-efflux protein) (NCBI ptt file) insig. 52 99
  Bacteroides ovatus ATCC 8483 BACOVA_02874 RND transporter, HAE1 family insig. 52 99
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS05045 hydrophobe/amphiphile efflux-1 family RND transporter strong 54 98
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS08425 efflux RND transporter permease subunit insig. 49 99
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06015 efflux RND transporter permease subunit cofit 48 98
  Phocaeicola dorei CL03T12C01 ABI39_RS18010 efflux RND transporter permease subunit insig. 48 98
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2781 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 50 96
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06875 hydrophobe/amphiphile efflux-1 family RND transporter strong 48 98
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08725 hydrophobe/amphiphile efflux-1 family RND transporter insig. 46 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2472 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 43 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0541 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family cofit 46 98
  Alteromonas macleodii MIT1002 MIT1002_00867 Efflux pump membrane transporter BepE insig. 43 97
  Pseudomonas sp. S08-1 OH686_07370 RND efflux system, inner membrane transporter cofit 41 98
  Marinobacter adhaerens HP15 HP15_933 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family insig. 41 97
  Dechlorosoma suillum PS Dsui_1871 hydrophobe/amphiphile efflux-1 (HAE1) family transporter strong 42 97
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03050 efflux RND transporter permease subunit insig. 43 98
  Sinorhizobium meliloti 1021 SMa1662 Cation/multidrug efflux pump insig. 39 97
  Desulfovibrio vulgaris Hildenborough JW710 DVU0061 multidrug resistance protein, putative (TIGR) strong 40 98
o Desulfovibrio vulgaris Miyazaki F DvMF_0036 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (RefSeq) insig. 41 97
  Desulfovibrio vulgaris Miyazaki F DvMF_2163 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (RefSeq) strong 41 99
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03655 multidrug efflux RND transporter permease subunit strong 42 97
  Desulfovibrio vulgaris Hildenborough JW710 DVU3248 AcrB/AcrD/AcrF family protein (TIGR) insig. 41 99
o Rhizobium sp. OAE497 ABIE40_RS23875 multidrug efflux RND transporter permease subunit insig. 41 98
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3740 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 42 96
  Sinorhizobium meliloti 1021 SM_b21498 acriflavin resistance protein insig. 41 97
  Shewanella loihica PV-4 Shew_1164 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) insig. 40 97
  Sinorhizobium meliloti 1021 SMc03971 multidrug-efflux system transmembrane protein insig. 40 97
  Rhodopseudomonas palustris CGA009 TX73_021205 multidrug efflux RND transporter permease subunit insig. 41 97
  Rhodopseudomonas palustris CGA009 TX73_000495 multidrug efflux RND transporter permease subunit insig. 40 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1794.1 RND efflux system, inner membrane transporter CmeB insig. 39 97
  Paraburkholderia graminis OAS925 ABIE53_005788 multidrug efflux pump insig. 40 97
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS19795 multidrug efflux RND transporter permease subunit insig. 39 97
o Ralstonia solanacearum UW163 UW163_RS19380 multidrug efflux RND transporter permease subunit insig. 39 97
o Ralstonia solanacearum GMI1000 RS_RS21030 multidrug efflux RND transporter permease subunit insig. 39 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS02525 efflux RND transporter permease subunit strong 39 100
  Variovorax sp. SCN45 GFF429 RND efflux system, inner membrane transporter insig. 41 100
o Herbaspirillum seropedicae SmR1 HSERO_RS02410 acriflavine resistance protein B strong 40 99
  Desulfovibrio vulgaris Hildenborough JW710 DVU2816 multidrug resistance protein (TIGR) sig. 39 97
  Rhizobium sp. OAE497 ABIE40_RS14875 multidrug efflux RND transporter permease subunit insig. 42 99
o Burkholderia phytofirmans PsJN BPHYT_RS16170 multidrug efflux RND transporter permease subunit no data 39 100
  Pseudomonas fluorescens SBW25 PFLU_RS14260 efflux RND transporter permease subunit insig. 42 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS14260 efflux RND transporter permease subunit insig. 42 97
  Burkholderia phytofirmans PsJN BPHYT_RS20640 multidrug efflux RND transporter permease subunit insig. 40 98
  Paraburkholderia graminis OAS925 ABIE53_003408 multidrug efflux pump strong 39 97
o Acinetobacter radioresistens SK82 MPMX26_00689 Multidrug resistance protein MexB strong 39 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04170 multidrug efflux pump strong 39 100
o Caulobacter crescentus NA1000 CCNA_00850 cation/multidrug efflux pump acrB2 strong 40 95
o Caulobacter crescentus NA1000 Δfur CCNA_00850 cation/multidrug efflux pump acrB2 cofit 40 95
  Pseudomonas simiae WCS417 PS417_13190 transporter insig. 42 97
  Shewanella loihica PV-4 Shew_3796 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) insig. 39 97
  Pseudomonas sp. S08-1 OH686_16050 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) cofit 38 98
  Phocaeicola dorei CL03T12C01 ABI39_RS01690 multidrug efflux RND transporter permease subunit insig. 39 98
  Pseudomonas syringae pv. syringae B728a Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 sig. 42 97
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 strong 42 97
  Bacteroides ovatus ATCC 8483 BACOVA_02607 RND transporter, HAE1 family cofit 40 98
o Pseudomonas stutzeri RCH2 Psest_0310 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 38 98
o Ralstonia solanacearum PSI07 RPSI07_RS03390 multidrug efflux RND transporter permease subunit insig. 38 97
  Pseudomonas syringae pv. syringae B728a Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1 strong 39 98
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1 no data 39 98
o Cupriavidus basilensis FW507-4G11 RR42_RS32420 multidrug efflux RND transporter permease subunit insig. 39 98
  Pseudomonas fluorescens FW300-N2C3 AO356_27605 transporter strong 41 97
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02440 multidrug efflux RND transporter permease subunit insig. 38 98
  Pseudomonas simiae WCS417 PS417_06770 multidrug transporter strong 39 98
o Shewanella oneidensis MR-1 SO4692 AcrB/AcrD/AcrF family protein (NCBI ptt file) strong 39 98
  Variovorax sp. OAS795 ABID97_RS17350 efflux RND transporter permease subunit insig. 41 99
o Shewanella amazonensis SB2B Sama_3554 AcrB/AcrD/AcrF family protein (RefSeq) strong 39 97
  Bacteroides stercoris CC31F HMPREF1181_RS14290 efflux RND transporter permease subunit insig. 40 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS29865 efflux RND transporter permease subunit insig. 39 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS03455 multidrug efflux RND transporter permease subunit insig. 41 97
o Synechococcus elongatus PCC 7942 Synpcc7942_2369 acrF Hydrophobe/amphiphile efflux-1 HAE1 strong 40 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2179.1 RND efflux system, inner membrane transporter CmeB cofit 40 98
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_824 Multidrug efflux transporter MexF strong 41 97
o Pseudomonas sp. RS175 PFR28_02013 multidrug efflux RND transporter permease subunit OqxB10 insig. 41 97
  Acidovorax sp. GW101-3H11 Ac3H11_258 RND multidrug efflux transporter; Acriflavin resistance protein insig. 41 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS09205 multidrug efflux RND transporter permease subunit no data 41 97
o Bosea sp. OAE506 ABIE41_RS01595 efflux RND transporter permease subunit insig. 38 98
  Bacteroides thetaiotaomicron VPI-5482 BT0886 putative cation efflux pump (NCBI ptt file) sig. 40 98
  Rhizobium sp. OAE497 ABIE40_RS14935 efflux RND transporter permease subunit insig. 39 99
o Shewanella sp. ANA-3 Shewana3_4045 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) strong 39 97
o Serratia liquefaciens MT49 IAI46_13385 efflux RND transporter permease subunit insig. 40 99
  Rhodopseudomonas palustris CGA009 TX73_015325 efflux RND transporter permease subunit insig. 39 98
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2824 RND efflux system, inner membrane transporter CmeB strong 38 97
  Pseudomonas sp. RS175 PFR28_01728 multidrug efflux RND transporter permease subunit OqxB27 insig. 41 97
  Herbaspirillum seropedicae SmR1 HSERO_RS23055 multidrug transporter insig. 37 99
  Pseudomonas fluorescens FW300-N2C3 AO356_04880 multidrug transporter strong 38 97
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS18285 efflux RND transporter permease subunit insig. 38 98
o Agrobacterium fabrum C58 Atu2483 AcrB/AcrD/AcrF family protein strong 42 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4864 Multidrug efflux transporter MexF insig. 41 97