Homologs of CA265_RS14620 from Pedobacter sp. GW460-11-11-14-LB5

hypothetical protein
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS14620		hypothetical protein	insig.	100	100
o	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS07350		sigma-70 family RNA polymerase sigma factor	insig.	43	97
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS12735		RNA polymerase subunit sigma-70	insig.	35	98
	Bacteroides thetaiotaomicron VPI-5482	BT2184		RNA polymerase ECF-type sigma factor (NCBI ptt file)	strong	34	95
	Bacteroides stercoris CC31F	HMPREF1181_RS04660		sigma-70 family RNA polymerase sigma factor	insig.	36	95
	Bacteroides ovatus ATCC 8483	BACOVA_00397		Sigma-70 region 2	sig.	36	95
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS09150		sigma-70 family RNA polymerase sigma factor	insig.	40	91
	Bacteroides thetaiotaomicron VPI-5482	BT0248		RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	31	92
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS07715		RNA polymerase sigma factor	no data	34	96
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_1304		RNA polymerase sigma factor, sigma-70 family	insig.	35	94
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.1840.1		FIG01210863: hypothetical protein	insig.	33	90
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS02825		sigma-70 family RNA polymerase sigma factor	insig.	35	93
	Rhodanobacter denitrificans MT42	LRK55_RS02580		sigma-70 family RNA polymerase sigma factor	cofit	35	93
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS10600		RNA polymerase subunit sigma-24	strong	33	89
	Bacteroides thetaiotaomicron VPI-5482	BT2492		RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	30	92
	Caulobacter crescentus NA1000	CCNA_03419		RNA polymerase ECF-type sigma factor	sig.	28	96
	Caulobacter crescentus NA1000 Δfur	CCNA_03419		RNA polymerase ECF-type sigma factor	cofit	28	96
o	Alteromonas macleodii MIT1002	MIT1002_04051		Sigma-24	insig.	26	94
	Bacteroides thetaiotaomicron VPI-5482	BT1817		RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	27	94
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS16905		sigma-70 family RNA polymerase sigma factor	insig.	28	89
	Phocaeicola dorei CL03T12C01	ABI39_RS12815		sigma-70 family RNA polymerase sigma factor	insig.	28	89
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_4578		RNA polymerase sigma factor, sigma-70 family	insig.	28	88
	Shewanella oneidensis MR-1	SO3840		RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file)	insig.	28	91
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS18950		sigma-70 family RNA polymerase sigma factor	insig.	27	91
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS13165		RNA polymerase sigma factor	insig.	28	83
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS21575		RNA polymerase subunit sigma	insig.	29	88
	Shewanella sp. ANA-3	Shewana3_0763		ECF subfamily RNA polymerase sigma-24 factor (RefSeq)	insig.	26	91
	Sinorhizobium meliloti 1021	SM_b20592		RNA polymerase sigma factor	insig.	25	94
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS04360		sigma-70 family RNA polymerase sigma factor	insig.	27	79
	Shewanella amazonensis SB2B	Sama_2611		ECF subfamily RNA polymerase sigma-24 factor (RefSeq)	insig.	28	97
	Kangiella aquimarina DSM 16071	B158DRAFT_2027		RNA polymerase sigma factor, sigma-70 family	insig.	29	90
	Phocaeicola dorei CL03T12C01	ABI39_RS09920		sigma-70 family RNA polymerase sigma factor	insig.	30	82
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS19950		RNA polymerase subunit sigma-24	insig.	25	100
	Rhodanobacter denitrificans MT42	LRK55_RS05200		sigma-70 family RNA polymerase sigma factor	insig.	27	89
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS05425		sigma-70 family RNA polymerase sigma factor	insig.	27	89
	Alteromonas macleodii MIT1002	MIT1002_03807		Sigma-W factor	insig.	26	91
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS14290		sigma-70 family RNA polymerase sigma factor	insig.	30	82
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS22010		RNA polymerase sigma factor	insig.	25	98
	Pseudomonas sp. S08-1	OH686_20045		RNA polymerase sigma factor RpoE	strong	26	88
	Bacteroides thetaiotaomicron VPI-5482	BT2044		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	26	87
	Bacteroides ovatus ATCC 8483	BACOVA_00669		Sigma-70 region 2	insig.	26	85
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS07180		RNA polymerase sigma factor RpoE	strong	26	87
	Lysobacter sp. OAE881	ABIE51_RS16295		sigma-70 family RNA polymerase sigma factor	insig.	27	87
	Pseudomonas fluorescens SBW25	PFLU_RS07230		RNA polymerase sigma factor RpoE	sig.	26	89
	Pseudomonas fluorescens SBW25-INTG	PFLU_RS07230		RNA polymerase sigma factor RpoE	strong	26	89
	Pseudomonas sp. RS175	PFR28_00690		RNA polymerase sigma-H factor	strong	26	89
	Pseudomonas simiae WCS417	PS417_07120		RNA polymerase sigma-H factor	strong	26	89
	Pseudomonas fluorescens GW456-L13	PfGW456L13_4516		RNA polymerase sigma-H factor AlgT	sig.	26	89
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_3323		RNA polymerase sigma-H factor AlgT	no data	26	89
	Pseudomonas fluorescens FW300-N2E3	AO353_17625		RNA polymerase subunit sigma	strong	26	89
	Pseudomonas fluorescens FW300-N2C3	AO356_04575		RNA polymerase subunit sigma	strong	26	89
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_2756		RNA polymerase sigma-H factor AlgT	strong	26	89
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS15190		RNA polymerase sigma factor	insig.	27	82
	Pseudomonas putida KT2440	PP_1427		RNA polymerase sigma E factor	sig.	26	89
	Pseudomonas syringae pv. syringae B728a	Psyr_3958		RNA polymerase, sigma-24 subunit, RpoE	strong	26	89
	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_3958		RNA polymerase, sigma-24 subunit, RpoE	strong	26	89
	Rhodanobacter sp. FW510-T8	OKGIIK_01380	rpoE	RNA polymerase subunit sigma-24	insig.	22	89
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS16945		RNA polymerase sigma factor	sig.	42	33
	Rhodanobacter denitrificans MT42	LRK55_RS16655		RNA polymerase sigma factor RpoE	no data	25	87
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS16940		RNA polymerase sigma factor RpoE	strong	25	87
	Phocaeicola dorei CL03T12C01	ABI39_RS12855		RNA polymerase sigma factor	insig.	42	33
	Bacteroides ovatus ATCC 8483	BACOVA_05165		Sigma-70 region 2	insig.	27	80
	Bacteroides stercoris CC31F	HMPREF1181_RS08110		sigma-70 family RNA polymerase sigma factor	insig.	25	86
	Rhodanobacter sp. FW510-T8	OKGIIK_07900	rpoE	RNA polymerase sigma factor RpoE	strong	25	85
	Bacteroides thetaiotaomicron VPI-5482	BT4347		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	40	33
	Bacteroides stercoris CC31F	HMPREF1181_RS05860		sigma-70 family RNA polymerase sigma factor	insig.	44	33
	Pseudomonas stutzeri RCH2	Psest_3100		RNA polymerase sigma factor RpoE	strong	25	89
	Kangiella aquimarina DSM 16071	B158DRAFT_2180		RNA polymerase, sigma-24 subunit, RpoE	strong	23	88
	Paraburkholderia sabiae LMG 24235	QEN71_RS04575		RNA polymerase sigma factor RpoE	strong	21	91
	Cupriavidus basilensis FW507-4G11	RR42_RS14080		RNA polymerase sigma factor RpoE	strong	21	89
	Shewanella loihica PV-4	Shew_2956		ECF subfamily RNA polymerase sigma-24 factor (RefSeq)	insig.	26	91
	Magnetospirillum magneticum AMB-1	AMB_RS09285		RNA polymerase sigma factor	no data	24	89
	Marinobacter adhaerens HP15	HP15_775		RNA polymerase sigma-70 RpoE type	insig.	27	75
	Rhodopseudomonas palustris CGA009	TX73_024905		sigma-70 family RNA polymerase sigma factor	insig.	25	92
	Burkholderia phytofirmans PsJN	BPHYT_RS14405		RNA polymerase sigma factor RpoE	no data	21	88
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_04355		RNA polymerase, sigma-24 subunit, RpoE	no data	21	88
	Paraburkholderia graminis OAS925	ABIE53_003043		RNA polymerase sigma-70 factor (ECF subfamily)	strong	21	88
	Variovorax sp. OAS795	ABID97_RS08330		RNA polymerase sigma factor RpoE	strong	20	87
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.3635.1		RNA polymerase ECF-type sigma factor	insig.	26	91
	Shewanella oneidensis MR-1	SO3096		RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file)	strong	25	98
	Klebsiella michiganensis M5al	BWI76_RS21355		RNA polymerase sigma factor RpoE	no data	25	77
	Shewanella sp. ANA-3	Shewana3_3152		ECF subfamily RNA polymerase sigma-24 factor (RefSeq)	cofit	25	92
	Dechlorosoma suillum PS	Dsui_0961		RNA polymerase sigma factor, SigZ family	insig.	24	79
	Rhodopseudomonas palustris CGA009	TX73_009355		sigma-70 family RNA polymerase sigma factor	insig.	24	82
	Marinobacter adhaerens HP15	HP15_1654		RNA polymerase, sigma-24 subunit, ECF subfamily	insig.	26	78
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS13725		sigma-70 family RNA polymerase sigma factor	sig.	25	81
	Shewanella loihica PV-4	Shew_1231		ECF subfamily RNA polymerase sigma-24 factor (RefSeq)	insig.	23	92
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS00075		RNA polymerase sigma factor	insig.	23	94
	Acidovorax sp. GW101-3H11	Ac3H11_1573		RNA polymerase sigma factor RpoE	no data	22	87
	Pseudomonas stutzeri RCH2	Psest_3456		RNA polymerase sigma factor, sigma-70 family	insig.	20	90
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_19605		RNA polymerase	insig.	25	87
	Enterobacter asburiae PDN3	EX28DRAFT_0072		RNA polymerase sigma factor RpoE	no data	27	77
	Enterobacter sp. TBS_079	MPMX20_03444		ECF RNA polymerase sigma-E factor	no data	27	77
	Shewanella sp. ANA-3	Shewana3_1453		RNA polymerase sigma factor (RefSeq)	sig.	25	98
	Erwinia tracheiphila SCR3	LU632_RS15425	rpoE	RNA polymerase sigma factor RpoE	strong	27	78
	Escherichia coli BL21	ECD_02467		RNA polymerase sigma E factor	no data	24	77
	Escherichia fergusonii Becca	EFB2_01323		ECF RNA polymerase sigma-E factor	no data	24	77
	Escherichia coli ECOR27	NOLOHH_13050	rpoE	RNA polymerase sigma factor RpoE	no data	24	77
	Escherichia coli ECOR38	HEPCGN_20520	rpoE	RNA polymerase sigma factor RpoE	no data	24	77
	Escherichia coli ECRC101	OKFHMN_21375	rpoE	RNA polymerase sigma factor RpoE	no data	24	77