Homologs of CA265_RS09205 from Pedobacter sp. GW460-11-11-14-LB5

ligand-gated channel protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09205 ligand-gated channel protein insig. 100 100
o Bacteroides stercoris CC31F HMPREF1181_RS12945 TonB-dependent receptor insig. 45 99
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13705 TonB-dependent receptor strong 45 99
o Bacteroides ovatus ATCC 8483 BACOVA_03265 TonB-dependent receptor cofit 47 91
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS05750 TonB-dependent receptor cofit 44 98
  Bacteroides ovatus ATCC 8483 BACOVA_04219 TonB-dependent receptor insig. 37 97
o Bacteroides thetaiotaomicron VPI-5482 BT1489 vitamin B12 receptor, outer membrane (NCBI ptt file) insig. 37 96
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS12480 TonB-dependent receptor strong 36 96
  Bacteroides stercoris CC31F HMPREF1181_RS11855 TonB-dependent receptor cofit 33 96
o Phocaeicola dorei CL03T12C01 ABI39_RS10475 TonB-dependent receptor cofit 35 97
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14760 TonB-dependent receptor strong 34 95
  Bacteroides thetaiotaomicron VPI-5482 BT1953 putative TonB-linked outer membrane receptor (NCBI ptt file) strong 22 96
  Bacteroides ovatus ATCC 8483 BACOVA_04705 TonB-dependent receptor insig. 23 89
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS10930 TonB-dependent vitamin B12 receptor insig. 23 96
  Bacteroides thetaiotaomicron VPI-5482 BT2094 TonB-dependent receptor (NCBI ptt file) insig. 24 40
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19150 TonB dependent receptor strong 23 37
  Rhodospirillum rubrum S1H Rru_A0488 TonB-dependent receptor (NCBI) cofit 23 78
  Rhodanobacter sp. FW510-T8 OKGIIK_05465 btuB TonB-dependent vitamin B12 receptor insig. 22 94
  Lysobacter sp. OAE881 ABIE51_RS18005 TonB-dependent vitamin B12 receptor insig. 27 17
  Vibrio cholerae E7946 ATCC 55056 CSW01_00790 vitamin B12 transporter BtuB cofit 27 30
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04495 TonB-dependent receptor insig. 20 67
  Ralstonia solanacearum UW163 UW163_RS09175 TonB-dependent receptor insig. 20 67
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS14720 TonB-dependent vitamin B12 receptor insig. 25 24
  Paraburkholderia sabiae LMG 24235 QEN71_RS25145 TonB-dependent receptor insig. 29 25
  Pseudomonas fluorescens FW300-N2C3 AO356_14985 TonB-dependent receptor insig. 26 17
  Lysobacter sp. OAE881 ABIE51_RS18005 TonB-dependent vitamin B12 receptor insig. 24 36
  Pseudomonas sp. RS175 PFR28_03938 Vitamin B12 transporter BtuB insig. 27 17
  Alteromonas macleodii MIT1002 MIT1002_00716 Outer membrane cobalamin translocator cofit 27 26
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4930 Outer membrane vitamin B12 receptor BtuB insig. 26 17
  Cupriavidus basilensis FW507-4G11 RR42_RS16140 TonB-dependent receptor sig. 20 78
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1388.1 Outer membrane vitamin B12 receptor BtuB insig. 22 36
  Rahnella sp. WP5 EX31_RS14135 TonB-dependent vitamin B12 receptor BtuB cofit 30 14
  Pantoea sp. MT58 IAI47_00955 TonB-dependent vitamin B12 receptor BtuB cofit 25 36
  Pectobacterium carotovorum WPP14 HER17_RS00980 TonB-dependent vitamin B12 receptor BtuB cofit 27 14
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2660 Outer membrane vitamin B12 receptor BtuB insig. 27 17
  Lysobacter sp. OAE881 ABIE51_RS04930 TonB-dependent vitamin B12 receptor insig. 25 16
  Burkholderia phytofirmans PsJN BPHYT_RS04850 TonB-denpendent receptor insig. 22 67
  Dechlorosoma suillum PS Dsui_1922 outer membrane receptor for ferrienterochelin and colicins cofit 21 37
  Marinobacter adhaerens HP15 HP15_3953 outer membrane receptor for transport of vitamin B strong 21 82
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01420 TonB-dependent siderophore receptor insig. 32 23
  Pseudomonas sp. S08-1 OH686_15755 Outer membrane vitamin B12 receptor BtuB insig. 28 16
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2352 Outer membrane vitamin B12 receptor BtuB insig. 29 14
  Serratia liquefaciens MT49 IAI46_24450 TonB-dependent vitamin B12 receptor BtuB insig. 25 36
  Pseudomonas fluorescens FW300-N2E3 AO353_06660 TonB-dependent receptor insig. 25 17
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1324 Outer membrane vitamin B12 receptor BtuB insig. 26 17
  Rhodanobacter sp. FW510-T8 OKGIIK_14325 btuB TonB-dependent vitamin B12 receptor cofit 23 19
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3976 Outer membrane vitamin B12 receptor BtuB no data 27 23
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS01505 TonB-dependent receptor insig. 22 91
  Rhodanobacter denitrificans MT42 LRK55_RS07560 TonB-dependent vitamin B12 receptor cofit 24 36
  Pseudomonas putida KT2440 PP_0525 TonB-dependent receptor, B12 family insig. 26 18
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS04605 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor insig. 27 20
  Serratia liquefaciens MT49 IAI46_24450 TonB-dependent vitamin B12 receptor BtuB insig. 26 14
  Phocaeicola dorei CL03T12C01 ABI39_RS15560 TonB-dependent receptor insig. 22 91
  Paraburkholderia graminis OAS925 ABIE53_001246 vitamin B12 transporter cofit 22 50
  Dickeya dadantii 3937 DDA3937_RS00995 TonB-dependent vitamin B12 receptor BtuB insig. 21 35
  Pseudomonas stutzeri RCH2 Psest_3541 Outer membrane cobalamin receptor protein insig. 26 17
  Dickeya dianthicola 67-19 HGI48_RS20380 TonB-dependent vitamin B12 receptor BtuB insig. 24 14
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1388.1 Outer membrane vitamin B12 receptor BtuB insig. 26 16
  Variovorax sp. OAS795 ABID97_RS17425 TonB-dependent receptor strong 27 13
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00136 vitamin B12 transporter insig. 26 30
  Pseudomonas fluorescens FW300-N2E3 AO353_06660 TonB-dependent receptor insig. 31 17
  Variovorax sp. SCN45 GFF450 Outer membrane vitamin B12 receptor BtuB cofit 28 13
  Azospirillum brasilense Sp245 AZOBR_RS27025 hypothetical protein insig. 30 19
  Agrobacterium fabrum C58 Atu3687 TonB-dependent receptor sig. 25 24
  Rahnella sp. WP5 EX31_RS14135 TonB-dependent vitamin B12 receptor BtuB cofit 24 34
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4567 Outer membrane receptor proteins, mostly Fe transport sig. 22 77
  Bacteroides thetaiotaomicron VPI-5482 BT0496 TonB-dependent receptor (NCBI ptt file) sig. 20 72
  Escherichia fergusonii Becca EFB2_04644 Vitamin B12 transporter BtuB insig. 33 9
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07830 TonB-dependent vitamin B12 receptor strong 32 16
  Pseudomonas stutzeri RCH2 Psest_3016 TonB-dependent vitamin B12 receptor strong 26 14
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2660 Outer membrane vitamin B12 receptor BtuB insig. 30 17
  Bacteroides thetaiotaomicron VPI-5482 BT1420 conserved hypothetical protein (NCBI ptt file) strong 26 20
  Enterobacter asburiae PDN3 EX28DRAFT_4429 TonB-dependent vitamin B12 receptor cofit 26 14
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS12105 TonB-dependent receptor strong 25 17
  Herbaspirillum seropedicae SmR1 HSERO_RS06410 iron transporter insig. 31 13
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS11330 TonB-dependent receptor insig. 27 22
  Pseudomonas sp. S08-1 OH686_15755 Outer membrane vitamin B12 receptor BtuB insig. 31 13
  Azospirillum brasilense Sp245 AZOBR_RS19160 outer membrane cobalamin receptor protein BtuB insig. 25 19
  Alteromonas macleodii MIT1002 MIT1002_02350 Colicin I receptor precursor cofit 25 21
  Dickeya dianthicola 67-19 HGI48_RS20380 TonB-dependent vitamin B12 receptor BtuB insig. 23 36
  Pseudomonas simiae WCS417 PS417_25210 TonB-dependent receptor insig. 23 17
  Bacteroides ovatus ATCC 8483 BACOVA_03823 TonB-dependent receptor insig. 22 51
  Rhodanobacter sp. FW510-T8 OKGIIK_14325 btuB TonB-dependent vitamin B12 receptor cofit 31 16
  Pseudomonas putida KT2440 PP_0525 TonB-dependent receptor, B12 family insig. 30 13
  Shewanella loihica PV-4 Shew_2480 TonB-dependent receptor (RefSeq) strong 25 24
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07830 TonB-dependent vitamin B12 receptor strong 23 14
  Enterobacter sp. TBS_079 MPMX20_04514 Vitamin B12 transporter BtuB cofit 26 14
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12585 TonB-dependent receptor strong 26 17
  Rhodanobacter denitrificans MT42 LRK55_RS07560 TonB-dependent vitamin B12 receptor cofit 23 14
  Azospirillum sp. SherDot2 MPMX19_03074 Vitamin B12 transporter BtuB insig. 26 19
  Caulobacter crescentus NA1000 CCNA_01021 TonB-dependent receptor cofit 25 22
  Caulobacter crescentus NA1000 Δfur CCNA_01021 TonB-dependent receptor cofit 25 22
  Ralstonia sp. UNC404CL21Col ABZR87_RS00095 TonB-dependent receptor insig. 21 17
  Variovorax sp. SCN45 GFF5429 Iron(III) dicitrate transport protein FecA cofit 31 15
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4930 Outer membrane vitamin B12 receptor BtuB insig. 29 17
  Escherichia fergusonii Becca EFB2_03894 Ferrichrome outer membrane transporter/phage receptor insig. 27 28
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19150 TonB dependent receptor strong 26 21
  Bacteroides ovatus ATCC 8483 BACOVA_00833 TonB-dependent receptor sig. 28 18
  Escherichia coli Nissle 1917 ECOLIN_RS00840 ferrichrome porin FhuA insig. 27 28
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3912 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins insig. 24 15