Homologs of CA265_RS05045 from Pedobacter sp. GW460-11-11-14-LB5

hydrophobe/amphiphile efflux-1 family RND transporter
SEED: RND efflux system, inner membrane transporter CmeB
KEGG: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS05045 hydrophobe/amphiphile efflux-1 family RND transporter strong 100 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12545 efflux RND transporter permease subunit cofit 60 98
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23010 hydrophobe/amphiphile efflux-1 family RND transporter strong 54 98
  Bacteroides thetaiotaomicron VPI-5482 BT3338 RND efflux system for fusidic acid, chlorpromazine, and thioridazine, inner membrane component (from data) strong 50 98
  Bacteroides ovatus ATCC 8483 BACOVA_01389 RND transporter, HAE1 family insig. 47 97
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2472 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 47 97
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00675 efflux RND transporter permease subunit insig. 48 97
  Phocaeicola dorei CL03T12C01 ABI39_RS08280 efflux RND transporter permease subunit insig. 48 97
  Bacteroides thetaiotaomicron VPI-5482 BT1966 multidrug resistance protein, AcrB/AcrD family (NCBI ptt file) insig. 47 97
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13660 efflux RND transporter permease subunit cofit 50 97
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS08425 efflux RND transporter permease subunit insig. 48 98
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02100 efflux RND transporter permease subunit strong 49 99
  Phocaeicola dorei CL03T12C01 ABI39_RS01285 efflux RND transporter permease subunit cofit 49 99
  Phocaeicola dorei CL03T12C01 ABI39_RS18010 efflux RND transporter permease subunit insig. 46 99
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06015 efflux RND transporter permease subunit cofit 46 99
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2781 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 48 96
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06875 hydrophobe/amphiphile efflux-1 family RND transporter strong 46 99
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01360 efflux RND transporter permease subunit insig. 45 97
  Bacteroides thetaiotaomicron VPI-5482 BT2941 multidrug resistance protein mexB (multidrug-efflux protein) (NCBI ptt file) insig. 43 98
  Bacteroides ovatus ATCC 8483 BACOVA_02874 RND transporter, HAE1 family insig. 43 98
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08725 hydrophobe/amphiphile efflux-1 family RND transporter insig. 43 99
o Pseudomonas sp. S08-1 OH686_07370 RND efflux system, inner membrane transporter cofit 41 98
o Desulfovibrio vulgaris Miyazaki F DvMF_2163 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (RefSeq) strong 43 99
o Desulfovibrio vulgaris Hildenborough JW710 DVU0061 multidrug resistance protein, putative (TIGR) strong 40 98
o Dechlorosoma suillum PS Dsui_1871 hydrophobe/amphiphile efflux-1 (HAE1) family transporter strong 40 99
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0541 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family cofit 43 97
  Alteromonas macleodii MIT1002 MIT1002_00867 Efflux pump membrane transporter BepE insig. 41 99
o Shewanella loihica PV-4 Shew_1164 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) insig. 41 97
o Paraburkholderia graminis OAS925 ABIE53_005788 multidrug efflux pump insig. 39 97
o Rhodopseudomonas palustris CGA009 TX73_021205 multidrug efflux RND transporter permease subunit insig. 40 98
o Sinorhizobium meliloti 1021 SM_b21498 acriflavin resistance protein insig. 40 98
o Burkholderia phytofirmans PsJN BPHYT_RS20640 multidrug efflux RND transporter permease subunit insig. 40 99
  Marinobacter adhaerens HP15 HP15_933 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family insig. 40 97
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1794.1 RND efflux system, inner membrane transporter CmeB insig. 39 99
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03655 multidrug efflux RND transporter permease subunit strong 42 97
  Sinorhizobium meliloti 1021 SMa1662 Cation/multidrug efflux pump insig. 38 98
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3519 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 41 99
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03050 efflux RND transporter permease subunit insig. 41 99
  Sinorhizobium meliloti 1021 SMc03971 multidrug-efflux system transmembrane protein insig. 39 97
o Pseudomonas syringae pv. syringae B728a Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1 strong 39 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1 no data 39 98
  Pseudomonas syringae pv. syringae B728a Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 sig. 40 99
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 strong 40 99
o Pseudomonas fluorescens FW300-N2C3 AO356_27605 transporter strong 40 97
  Rhodopseudomonas palustris CGA009 TX73_000495 multidrug efflux RND transporter permease subunit insig. 40 97
  Herbaspirillum seropedicae SmR1 HSERO_RS02410 acriflavine resistance protein B strong 39 98
  Desulfovibrio vulgaris Miyazaki F DvMF_0036 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (RefSeq) insig. 37 99
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3740 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 41 96
o Pseudomonas fluorescens SBW25 PFLU_RS14260 efflux RND transporter permease subunit insig. 40 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS14260 efflux RND transporter permease subunit insig. 40 97
o Pseudomonas simiae WCS417 PS417_06770 multidrug transporter strong 39 99
  Shewanella loihica PV-4 Shew_3796 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) insig. 38 98
o Variovorax sp. SCN45 GFF429 RND efflux system, inner membrane transporter insig. 41 98
o Pseudomonas putida KT2440 PP_1385 Probable efflux pump membrane transporter TtgB strong 39 97
  Pseudomonas simiae WCS417 PS417_13190 transporter insig. 40 97
o Magnetospirillum magneticum AMB-1 AMB_RS09480 multidrug efflux RND transporter permease subunit cofit 39 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_824 Multidrug efflux transporter MexF strong 40 97
  Pseudomonas putida KT2440 PP_3426 Multidrug efflux RND transporter MexF sig. 40 98
  Pseudomonas sp. S08-1 OH686_16050 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) cofit 39 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3060 Multidrug efflux transporter MexF insig. 40 97
  Pseudomonas sp. S08-1 OH686_01005 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) cofit 39 98
  Desulfovibrio vulgaris Hildenborough JW710 DVU3248 AcrB/AcrD/AcrF family protein (TIGR) insig. 37 98
  Rhizobium sp. OAE497 ABIE40_RS14875 multidrug efflux RND transporter permease subunit insig. 41 99
o Variovorax sp. OAS795 ABID97_RS17350 efflux RND transporter permease subunit insig. 40 98
o Pseudomonas fluorescens FW300-N2E3 AO353_23960 transporter sig. 40 97
o Rhodospirillum rubrum S1H Rru_A0886 Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) insig. 40 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS03455 multidrug efflux RND transporter permease subunit insig. 39 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4864 Multidrug efflux transporter MexF insig. 40 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS09205 multidrug efflux RND transporter permease subunit no data 39 97
o Acidovorax sp. GW101-3H11 Ac3H11_258 RND multidrug efflux transporter; Acriflavin resistance protein insig. 40 97
  Dechlorosoma suillum PS Dsui_2026 hydrophobe/amphiphile efflux-1 (HAE1) family transporter cofit 40 99
o Pseudomonas sp. RS175 PFR28_01728 multidrug efflux RND transporter permease subunit OqxB27 insig. 40 97
o Shewanella sp. ANA-3 Shewana3_1993 acriflavin resistance protein (RefSeq) cofit 40 97
  Ralstonia solanacearum GMI1000 RS_RS21030 multidrug efflux RND transporter permease subunit insig. 38 97
  Pseudomonas fluorescens FW300-N2E3 AO353_17295 multidrug transporter strong 37 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4581 RND efflux system, inner membrane transporter CmeB strong 38 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01877 multidrug efflux pump insig. 39 97
  Synechococcus elongatus PCC 7942 Synpcc7942_2369 acrF Hydrophobe/amphiphile efflux-1 HAE1 strong 38 99
  Pseudomonas fluorescens FW300-N2C3 AO356_04880 multidrug transporter strong 38 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4246 RND efflux system, inner membrane transporter CmeB insig. 38 98
  Pseudomonas sp. RS175 PFR28_02013 multidrug efflux RND transporter permease subunit OqxB10 insig. 39 97
  Rhizobium sp. OAE497 ABIE40_RS24225 efflux RND transporter permease subunit insig. 39 97
  Pseudomonas fluorescens SBW25 PFLU_RS06805 efflux RND transporter permease subunit cofit 38 98
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06805 efflux RND transporter permease subunit strong 38 98
  Ralstonia solanacearum PSI07 RPSI07_RS03390 multidrug efflux RND transporter permease subunit insig. 38 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2824 RND efflux system, inner membrane transporter CmeB strong 38 99
o Pseudomonas stutzeri RCH2 Psest_2144 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family sig. 40 98
o Ralstonia sp. UNC404CL21Col ABZR87_RS05315 efflux RND transporter permease subunit strong 40 96
  Ralstonia solanacearum PSI07 RPSI07_RS23905 hydrophobe/amphiphile efflux-1 family RND transporter strong 39 96
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02440 multidrug efflux RND transporter permease subunit insig. 36 98
  Herbaspirillum seropedicae SmR1 HSERO_RS06815 multidrug transporter insig. 38 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3246 RND efflux system, inner membrane transporter CmeB strong 38 98
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19795 multidrug efflux RND transporter permease subunit insig. 37 97
  Ralstonia solanacearum UW163 UW163_RS19380 multidrug efflux RND transporter permease subunit insig. 37 97
  Ralstonia solanacearum GMI1000 RS_RS00045 multidrug efflux RND transporter permease subunit strong 39 96
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18285 efflux RND transporter permease subunit insig. 38 98
  Rhodospirillum rubrum S1H Rru_A1118 Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) insig. 40 96
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00010 multidrug efflux RND transporter permease subunit insig. 39 98
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09445 multidrug efflux RND transporter permease subunit strong 39 96
  Ralstonia solanacearum UW163 UW163_RS04135 multidrug efflux RND transporter permease subunit insig. 39 96