Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Klebsiella michiganensis M5al | BWI76_RS18640 | | helix-turn-helix transcriptional regulator | sig. | 100 | 100 |
| Rhodopseudomonas palustris CGA009 | TX73_008645 | | response regulator | cofit | 28 | 80 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2797.1 | | DNA-binding response regulator, LuxR family | no data | 48 | 28 |
| Magnetospirillum magneticum AMB-1 | AMB_RS19535 | | DNA-binding response regulator | insig. | 35 | 38 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1897 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 49 | 32 |
| Azospirillum sp. SherDot2 | MPMX19_01792 | | Putative HTH-type transcriptional regulator YhjB | insig. | 34 | 49 |
| Enterobacter sp. TBS_079 | MPMX20_00033 | | Transcriptional regulatory protein UhpA | sig. | 29 | 78 |
| Magnetospirillum magneticum AMB-1 | AMB_RS06830 | | DNA-binding response regulator | insig. | 45 | 28 |
| Escherichia coli BL21 | ECD_03553 | | response regulator in two-component regulatory system wtih UhpB | insig. | 40 | 35 |
| Escherichia fergusonii Becca | EFB2_00029 | | Transcriptional regulatory protein UhpA | insig. | 40 | 35 |
| Escherichia coli ECOR27 | NOLOHH_07335 | uhpA_G97D | DNA-binding response regulator UhpA | cofit | 40 | 35 |
| Escherichia coli ECOR38 | HEPCGN_13905 | uhpA_G97D | DNA-binding response regulator UhpA | cofit | 40 | 35 |
| Escherichia coli ECRC101 | OKFHMN_15180 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 40 | 35 |
| Escherichia coli ECRC101 | MCAODC_05690 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 40 | 35 |
| Escherichia coli ECRC102 | NIAGMN_12940 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 40 | 35 |
| Escherichia coli ECRC62 | BNILDI_04190 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 40 | 35 |
| Escherichia coli ECRC98 | JDDGAC_18805 | uhpA_G97D | DNA-binding response regulator UhpA | no data | 40 | 35 |
| Escherichia coli ECRC99 | KEDOAH_12965 | uhpA_G97D | DNA-binding response regulator UhpA | no data | 40 | 35 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00031 | | Transcriptional regulatory protein UhpA | insig. | 40 | 35 |
| Escherichia coli Nissle 1917 | ECOLIN_RS21160 | | transcriptional regulator UhpA | insig. | 40 | 35 |
| Escherichia coli BW25113 | b3669 | uhpA | DNA-binding response regulator in two-component regulatory system wtih UhpB (NCBI) | sig. | 40 | 35 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS10190 | | LuxR family transcriptional regulator | insig. | 45 | 33 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS24135 | | DNA-binding response regulator | insig. | 36 | 42 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF304 | | Transcriptional regulatory protein UhpA | insig. | 27 | 78 |
| Lysobacter sp. OAE881 | ABIE51_RS16750 | | response regulator transcription factor | cofit | 41 | 30 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1122 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 39 | 41 |
| Bacteroides stercoris CC31F | HMPREF1181_RS00085 | | response regulator transcription factor | insig. | 35 | 45 |
| Pseudomonas stutzeri RCH2 | Psest_3878 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | sig. | 48 | 31 |
| Dickeya dianthicola 67-19 | HGI48_RS02840 | | transcriptional regulator UhpA | insig. | 37 | 36 |
| Dickeya dianthicola ME23 | DZA65_RS03015 | | transcriptional regulator UhpA | insig. | 37 | 36 |
| Bacteroides stercoris CC31F | HMPREF1181_RS04510 | | response regulator transcription factor | insig. | 48 | 29 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS20525 | | LuxR family transcriptional regulator | cofit | 46 | 29 |
| Klebsiella michiganensis M5al | BWI76_RS27800 | | DNA-binding response regulator | sig. | 36 | 36 |
| Dickeya dadantii 3937 | DDA3937_RS02865 | | transcriptional regulator UhpA | strong | 37 | 36 |
| Variovorax sp. OAS795 | ABID97_RS22515 | | response regulator transcription factor | strong | 36 | 33 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4965 | | Transcriptional regulator, LuxR family | insig. | 44 | 29 |
| Pseudomonas sp. RS175 | PFR28_00219 | | HTH-type transcriptional regulator MalT | insig. | 44 | 29 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_16800 | | LuxR family transcriptional regulator | insig. | 44 | 29 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5287 | | Transcriptional regulator, LuxR family | insig. | 44 | 29 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS08760 | | XRE family transcriptional regulator | no data | 41 | 36 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS13415 | | LuxR C-terminal-related transcriptional regulator | insig. | 40 | 28 |
| Enterobacter asburiae PDN3 | EX28DRAFT_3952 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 27 | 78 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3449 | | Putative arylsulfatase regulatory protein | insig. | 39 | 34 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS10380 | | helix-turn-helix transcriptional regulator | insig. | 39 | 31 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS14700 | | helix-turn-helix transcriptional regulator | strong | 39 | 31 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS06700 | | LuxR family transcriptional regulator | insig. | 30 | 51 |
| Variovorax sp. SCN45 | GFF5818 | | Two-component transcriptional response regulator, NarL/FixJ family | insig. | 40 | 29 |
| Pseudomonas stutzeri RCH2 | Psest_3491 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | no data | 33 | 36 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2003 | | Putative luxR family bacterial regulatory protein | sig. | 46 | 29 |
| Azospirillum brasilense Sp245 | AZOBR_RS08040 | | regulator | insig. | 31 | 49 |
| Rhodanobacter denitrificans MT42 | LRK55_RS17810 | | response regulator transcription factor | cofit | 35 | 31 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS17955 | | response regulator transcription factor | cofit | 35 | 31 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03107 | | two component transcriptional regulator, LuxR family | no data | 46 | 34 |
| Pseudomonas stutzeri RCH2 | Psest_1446 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | no data | 39 | 36 |
| Burkholderia phytofirmans PsJN | BPHYT_RS30900 | | transcriptional regulator | sig. | 46 | 34 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_1622 | | Transcriptional regulator, LuxR family | insig. | 43 | 30 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2408 | | luxR family transcriptional regulator (NCBI ptt file) | no data | 43 | 28 |
| Azospirillum sp. SherDot2 | MPMX19_05747 | | Transcriptional regulatory protein DegU | insig. | 38 | 34 |
| Pseudomonas sp. RS175 | PFR28_03617 | | HTH-type transcriptional regulator MalT | sig. | 44 | 29 |
| Pseudomonas syringae pv. syringae B728a | Psyr_3299 | | two component transcriptional regulator, LuxR family | sig. | 36 | 34 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3299 | | two component transcriptional regulator, LuxR family | insig. | 36 | 34 |
| Pantoea sp. MT58 | IAI47_13615 | | response regulator transcription factor | insig. | 32 | 36 |
| Dechlorosoma suillum PS | Dsui_2511 | | response regulator | insig. | 32 | 34 |
| Azospirillum sp. SherDot2 | MPMX19_04863 | | Transcriptional regulatory protein LnrK | insig. | 44 | 29 |
| Bacteroides ovatus ATCC 8483 | BACOVA_03017 | | transcriptional regulator, LuxR family | insig. | 43 | 28 |
| Marinobacter adhaerens HP15 | HP15_2420 | | regulatory protein, LuxR | insig. | 39 | 38 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS14420 | | response regulator transcription factor | insig. | 38 | 47 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4893 | | Nitrogen regulation protein NR(I) | cofit | 41 | 28 |
| Escherichia coli Nissle 1917 | ECOLIN_RS33220 | | helix-turn-helix transcriptional regulator | no data | 41 | 34 |
| Bacteroides thetaiotaomicron VPI-5482 | BT0520 | | transcriptional regulator (NCBI ptt file) | no data | 37 | 47 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_15025 | | LuxR family transcriptional regulator | insig. | 37 | 36 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_23725 | | LuxR family transcriptional regulator | insig. | 33 | 35 |
| Paraburkholderia graminis OAS925 | ABIE53_004191 | | DNA-binding NarL/FixJ family response regulator | strong | 45 | 34 |
| Escherichia coli Nissle 1917 | ECOLIN_RS13595 | | LuxR C-terminal-related transcriptional regulator | insig. | 39 | 40 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVUA0137 | | response regulator (TIGR) | insig. | 37 | 41 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS07355 | | LuxR family transcriptional regulator | no data | 31 | 41 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS04230 | | LuxR family transcriptional regulator | strong | 28 | 42 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3581 | | Secretion system regulator of DegU/UvrY/BvgA type | insig. | 44 | 26 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1128 | | Two-component response regulator | insig. | 37 | 36 |
| Rhodopseudomonas palustris CGA009 | TX73_006410 | | response regulator transcription factor | insig. | 34 | 36 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS05670 | | response regulator transcription factor | strong | 30 | 39 |
| Pseudomonas sp. S08-1 | OH686_11730 | | hypothetical protein | cofit | 44 | 29 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_4080 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 34 | 42 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS36695 | | HD domain-containing phosphohydrolase | insig. | 32 | 47 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05900 | | HD-GYP domain | insig. | 41 | 30 |
| Shewanella oneidensis MR-1 | SO4157 | | DNA-binding response regulator (NCBI ptt file) | insig. | 31 | 67 |
| Enterobacter asburiae PDN3 | EX28DRAFT_4124 | | ATP-dependent transcriptional regulator | insig. | 48 | 29 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF599 | | Transcriptional activator of maltose regulon, MalT | insig. | 48 | 29 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3272 | | DNA-binding response regulator, LuxR family | insig. | 47 | 26 |
| Pseudomonas stutzeri RCH2 | Psest_1124 | | ATP-dependent transcriptional regulator | sig. | 46 | 29 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1028 | | Transcriptional regulator, LuxR family | insig. | 46 | 29 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_06895 | | LuxR family transcriptional regulator | insig. | 42 | 29 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3241 | | Transcriptional regulator, LuxR family | strong | 42 | 29 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4454 | | Transcriptional regulator of fimbriae expression FimZ (LuxR/UhpA family) | insig. | 40 | 39 |
| Pseudomonas sp. RS175 | PFR28_02072 | | HTH-type transcriptional regulator MalT | insig. | 40 | 36 |
| Pseudomonas putida KT2440 | PP_2126 | | DNA-binding response regulator, LuxR family | insig. | 40 | 33 |
| Lysobacter sp. OAE881 | ABIE51_RS02650 | | response regulator transcription factor | insig. | 40 | 29 |
| Castellaniella sp019104865 MT123 | ABCV34_RS14590 | | helix-turn-helix transcriptional regulator | insig. | 39 | 30 |
| Serratia liquefaciens MT49 | IAI46_00435 | | transcriptional regulator UhpA | insig. | 36 | 35 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2030 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 35 | 45 |