| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Agrobacterium fabrum C58 | Atu1038 | | two component response regulator | insig. | 100 | 100 |
| o | Rhizobium sp. OAE497 | ABIE40_RS06090 | | response regulator | insig. | 48 | 92 |
| | Sinorhizobium meliloti 1021 | SMc01953 | | 2-component receiver domain-containing protein | insig. | 40 | 82 |
| | Agrobacterium fabrum C58 | Atu2165 | | bacteriophytochrome protein | insig. | 37 | 92 |
| | Bosea sp. OAE506 | ABIE41_RS08275 | | HWE histidine kinase domain-containing protein | insig. | 38 | 80 |
| o | Azospirillum sp. SherDot2 | MPMX19_05605 | | hypothetical protein | insig. | 38 | 90 |
| | Azospirillum sp. SherDot2 | MPMX19_04269 | | hypothetical protein | no data | 39 | 87 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS06585 | | response regulator | no data | 34 | 92 |
| | Bosea sp. OAE506 | ABIE41_RS04060 | | response regulator | no data | 34 | 92 |
| | Pseudomonas putida KT2440 | PP_3364 | | Response regulator | insig. | 33 | 83 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_23975 | | chemotaxis protein CheY | no data | 38 | 83 |
| | Rhodopseudomonas palustris CGA009 | TX73_005095 | | HWE histidine kinase domain-containing protein | insig. | 35 | 78 |
| | Lysobacter sp. OAE881 | ABIE51_RS09860 | | response regulator | no data | 36 | 79 |
| | Azospirillum sp. SherDot2 | MPMX19_01598 | | hypothetical protein | insig. | 29 | 90 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1502 | | Two-component system regulatory protein | insig. | 39 | 82 |
| | Bosea sp. OAE506 | ABIE41_RS16240 | | response regulator | insig. | 32 | 93 |
| | Pseudomonas sp. BP01 | JOY50_RS14150 | | HWE histidine kinase domain-containing protein | insig. | 32 | 83 |
| | Azospirillum sp. SherDot2 | MPMX19_03190 | | hypothetical protein | no data | 36 | 84 |
| | Sphingobium sp. HT1-2 | GFF4850 | | hypothetical protein | cofit | 34 | 88 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1459.1 | | Two-component system regulatory protein | insig. | 35 | 85 |
| | Azospirillum brasilense Sp245 | AZOBR_RS30160 | | chemotaxis protein CheY | insig. | 31 | 82 |
| | Rhizobium sp. OAE497 | ABIE40_RS29095 | | response regulator | insig. | 35 | 83 |
| | Azospirillum sp. SherDot2 | MPMX19_06291 | | hypothetical protein | no data | 33 | 90 |
| | Lysobacter sp. OAE881 | ABIE51_RS02720 | | response regulator | insig. | 31 | 91 |
| | Caulobacter crescentus NA1000 | CCNA_03110 | | two-component receiver domain protein | strong | 37 | 83 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03110 | | two-component receiver domain protein | cofit | 37 | 83 |
| | Lysobacter sp. OAE881 | ABIE51_RS14405 | | response regulator | no data | 33 | 96 |
| | Sphingobium sp. HT1-2 | GFF2215 | | Two-component system sensor histidine kinase | cofit | 35 | 90 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c28680 | | putative bacteriophytochrome | insig. | 31 | 82 |
| | Azospirillum sp. SherDot2 | MPMX19_06289 | | hypothetical protein | no data | 36 | 79 |
| | Xanthobacter sp. DMC5 | GFF1896 | | hypothetical protein | sig. | 36 | 90 |
| | Sinorhizobium meliloti 1021 | SMa0114 | | two-component response regulator | cofit | 35 | 83 |
| | Sphingobium sp. HT1-2 | GFF650 | | Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) | cofit | 31 | 80 |
| | Sphingobium sp. HT1-2 | GFF5140 | | Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) | cofit | 29 | 90 |
| | Pseudomonas sp. RS175 | PFR28_02307 | | hypothetical protein | insig. | 33 | 86 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06576 | | CheY chemotaxis protein or a CheY-like REC (receiver) domain | insig. | 42 | 80 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0208 | | Response regulator receiver domain | strong | 36 | 82 |
| | Paraburkholderia graminis OAS925 | ABIE53_001094 | | CheY-like chemotaxis protein | sig. | 39 | 83 |
| | Rhizobium sp. OAE497 | ABIE40_RS27195 | | response regulator | insig. | 32 | 87 |
| | Rhizobium sp. OAE497 | ABIE40_RS20270 | | response regulator | insig. | 42 | 66 |
| | Rhizobium sp. OAE497 | ABIE40_RS14515 | | HWE histidine kinase domain-containing protein | insig. | 31 | 78 |
| | Azospirillum sp. SherDot2 | MPMX19_06931 | | hypothetical protein | no data | 31 | 81 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2384 | | response regulator receiver protein | no data | 31 | 90 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2384 | | response regulator receiver protein | insig. | 31 | 90 |
| | Rhodospirillum rubrum S1H | Rru_A3285 | | Response regulator receiver domain protein (CheY) (NCBI) | insig. | 37 | 80 |
| | Sinorhizobium meliloti 1021 | SM_b20934 | | two-component response regulator protein | insig. | 35 | 83 |
| | Caulobacter crescentus NA1000 | CCNA_00666 | | response regulator receiver domain protein | cofit | 40 | 68 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_00666 | | response regulator receiver domain protein | cofit | 40 | 68 |
| | Caulobacter crescentus NA1000 | CCNA_03154 | | PAS-family sensor histidine kinase/receiver protein | sig. | 33 | 79 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03154 | | PAS-family sensor histidine kinase/receiver protein | insig. | 33 | 79 |
| | Serratia liquefaciens MT49 | IAI46_17010 | | two-component response regulator DpiA | insig. | 39 | 60 |
| | Bosea sp. OAE506 | ABIE41_RS07045 | | response regulator | insig. | 29 | 83 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03058 | | CheY chemotaxis protein or a CheY-like REC (receiver) domain | insig. | 36 | 80 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_01475 | | Response regulatory domain-containing protein | insig. | 32 | 78 |
| | Paraburkholderia graminis OAS925 | ABIE53_005913 | | signal transduction histidine kinase/CheY-like chemotaxis protein/CHASE3 domain sensor protein | sig. | 40 | 54 |
| | Sphingobium sp. HT1-2 | GFF3119 | | putative sensory transduction regulatory protein | cofit | 31 | 80 |
| | Azospirillum sp. SherDot2 | MPMX19_06929 | | hypothetical protein | insig. | 33 | 77 |
| | Azospirillum sp. SherDot2 | MPMX19_06040 | | Phyllosphere-induced regulator PhyR | insig. | 32 | 86 |
| | Azospirillum sp. SherDot2 | MPMX19_04424 | | Phyllosphere-induced regulator PhyR | insig. | 30 | 92 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS00670 | | response regulator | no data | 37 | 53 |
| | Sinorhizobium meliloti 1021 | SMc01504 | | two-component response regulator | strong | 33 | 82 |
| | Cellulophaga baltica 18 | M666_RS12540 | | sigma 54-interacting response regulator | insig. | 31 | 83 |
| | Rhizobium sp. OAE497 | ABIE40_RS30880 | | hypothetical protein | insig. | 30 | 79 |
| | Sinorhizobium meliloti 1021 | SMa2065 | | hypothetical protein | insig. | 31 | 86 |
| | Xanthobacter sp. DMC5 | GFF2318 | | Phyllosphere-induced regulator PhyR | insig. | 32 | 79 |
| | Azospirillum brasilense Sp245 | AZOBR_RS25995 | | regulator | strong | 32 | 86 |
| | Paraburkholderia graminis OAS925 | ABIE53_001454 | | CheY-like chemotaxis protein | sig. | 39 | 65 |
| | Rhodopseudomonas palustris CGA009 | TX73_014700 | | response regulator | cofit | 33 | 78 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4667.1 | | Two-component system regulatory protein | insig. | 30 | 89 |
| | Rhizobium sp. OAE497 | ABIE40_RS30650 | | response regulator | insig. | 34 | 62 |
| | Sinorhizobium meliloti 1021 | SMc00794 | | two-component response regulator | strong | 36 | 79 |
| | Rhodospirillum rubrum S1H | Rru_A1788 | | Response regulator receiver domain protein (CheY) (NCBI) | insig. | 33 | 81 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4408 | | two-component response regulator | insig. | 32 | 86 |
| | Azospirillum sp. SherDot2 | MPMX19_04973 | | hypothetical protein | insig. | 34 | 62 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02881 | | multi-sensor hybrid histidine kinase (EC 2.7.13.3) | insig. | 39 | 54 |
| | Rhizobium sp. OAE497 | ABIE40_RS14460 | | response regulator | strong | 32 | 79 |
| | Lysobacter sp. OAE881 | ABIE51_RS03460 | | response regulator | insig. | 30 | 88 |
| | Rhodopseudomonas palustris CGA009 | TX73_023430 | | response regulator | insig. | 28 | 85 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c27080 | | response regulator receiver protein | insig. | 28 | 86 |
| | Azospirillum sp. SherDot2 | MPMX19_01090 | | Phyllosphere-induced regulator PhyR | insig. | 32 | 94 |
| | Azospirillum sp. SherDot2 | MPMX19_02869 | | Sensor histidine kinase TmoS | insig. | 29 | 83 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21690 | | regulator | insig. | 27 | 91 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2428.1 | | Two-component system regulatory protein | sig. | 29 | 88 |
| | Shewanella loihica PV-4 | Shew_2801 | | multi-sensor hybrid histidine kinase (RefSeq) | insig. | 38 | 57 |
| | Azospirillum brasilense Sp245 | AZOBR_RS06745 | | regulator | insig. | 31 | 93 |
| | Agrobacterium fabrum C58 | Atu1987 | | two component response regulator | insig. | 27 | 79 |
| | Rhodopseudomonas palustris CGA009 | TX73_021890 | | response regulator | cofit | 30 | 78 |
| | Rhizobium sp. OAE497 | ABIE40_RS27410 | | response regulator | insig. | 28 | 96 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3837 | | response regulator receiver and SARP domain protein (RefSeq) | insig. | 28 | 89 |
| | Variovorax sp. OAS795 | ABID97_RS05490 | | PAS domain S-box protein | sig. | 37 | 67 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2933 | | response regulator/sensory box/HDIG domain protein (TIGR) | strong | 31 | 79 |
| | Agrobacterium fabrum C58 | Atu4162 | | two-component response regulator | strong | 31 | 79 |
| | Caulobacter crescentus NA1000 | CCNA_03591 | | anti-anti sigma factor/receiver protein PhyR | strong | 33 | 78 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03591 | | anti-anti sigma factor/receiver protein PhyR | cofit | 33 | 78 |
| | Azospirillum brasilense Sp245 | AZOBR_RS31670 | | hypothetical protein | insig. | 32 | 89 |
| | Sphingobium sp. HT1-2 | GFF1633 | | Response regulator receiver protein | insig. | 30 | 85 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0681 | | sensor histidine kinase/response regulator (TIGR) | strong | 30 | 86 |
| | Pseudomonas sp. S08-1 | OH686_23760 | | hypothetical protein | insig. | 30 | 93 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0505 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 28 | 84 |
| | Caulobacter crescentus NA1000 | CCNA_00286 | | two-component receiver domain protein LovR | cofit | 31 | 78 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_00286 | | two-component receiver domain protein LovR | cofit | 31 | 78 |
| | Lysobacter sp. OAE881 | ABIE51_RS11970 | | response regulator transcription factor | insig. | 29 | 89 |
| | Rhizobium sp. OAE497 | ABIE40_RS26860 | | response regulator | sig. | 28 | 79 |
| | Pseudomonas putida KT2440 | PP_3762 | | Response regulator | sig. | 33 | 92 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0244 | | FOG: CheY-like receiver | insig. | 37 | 62 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0621 | | sigma-54 dependent DNA-binding response regulator (TIGR) | insig. | 35 | 84 |
| | Agrobacterium fabrum C58 | Atu4047 | | two component sensor kinase/response regulator hybrid | insig. | 31 | 88 |
| | Lysobacter sp. OAE881 | ABIE51_RS12890 | | response regulator | insig. | 30 | 84 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS26785 | | chemotaxis protein CheY | insig. | 36 | 54 |
| | Bosea sp. OAE506 | ABIE41_RS24110 | | response regulator | insig. | 32 | 65 |
| | Variovorax sp. SCN45 | GFF3032 | | Two-component transcriptional response regulator, LuxR family | insig. | 31 | 67 |
| | Bosea sp. OAE506 | ABIE41_RS04085 | | response regulator | sig. | 30 | 78 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3795.1 | | Histidine kinase/response regulator hybrid protein | sig. | 30 | 91 |
| | Rhizobium sp. OAE497 | ABIE40_RS24250 | | response regulator | insig. | 36 | 82 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3490 | | Response regulator receiver domain/Sigma-70, region 4 | strong | 31 | 83 |
| | Pseudomonas sp. BP01 | JOY50_RS04915 | | response regulator | insig. | 33 | 90 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0933 | | response regulator (TIGR) | insig. | 32 | 95 |
| | Escherichia coli BL21 | ECD_00590 | | response regulator in two-component regulatory system with CitA | insig. | 33 | 59 |
| | Escherichia fergusonii Becca | EFB2_03471 | | Transcriptional regulatory protein DpiA | insig. | 33 | 59 |
| | Escherichia coli ECOR27 | NOLOHH_23810 | dpiA | two-component response regulator DpiA | insig. | 33 | 59 |
| | Escherichia coli ECOR38 | HEPCGN_00840 | dpiA | two-component response regulator DpiA | insig. | 33 | 59 |
| | Escherichia coli ECRC100 | OKFHMN_07435 | dpiA | two-component response regulator DpiA | cofit | 33 | 59 |
| | Escherichia coli ECRC101 | MCAODC_26650 | dpiA | two-component response regulator DpiA | insig. | 33 | 59 |
| | Escherichia coli ECRC102 | NIAGMN_05490 | dpiA | two-component response regulator DpiA | insig. | 33 | 59 |
| | Escherichia coli ECRC62 | BNILDI_21820 | dpiA | two-component response regulator DpiA | insig. | 33 | 59 |
| | Escherichia coli ECRC98 | JDDGAC_11080 | dpiA | two-component response regulator DpiA | insig. | 33 | 59 |
| | Escherichia coli ECRC99 | KEDOAH_20535 | dpiA | two-component response regulator DpiA | no data | 33 | 59 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03085 | | Transcriptional regulatory protein DpiA | insig. | 33 | 59 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS03385 | | two-component response regulator DpiA | no data | 33 | 59 |
| | Escherichia coli BW25113 | b0620 | citB | DNA-binding response regulator in two-component regulatory system with citA (NCBI) | insig. | 33 | 59 |
| | Pseudomonas simiae WCS417 | PS417_13910 | | response regulator | no data | 31 | 88 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS16785 | | response regulator | insig. | 37 | 54 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2416 | | two component, sigma54 specific, transcriptional regulator, Fis family | insig. | 36 | 58 |
| | Caulobacter crescentus NA1000 | CCNA_03675 | | PAS-family sensor histidine kinase | cofit | 35 | 90 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03675 | | PAS-family sensor histidine kinase | cofit | 35 | 90 |
| | Rhizobium sp. OAE497 | ABIE40_RS26775 | | helix-turn-helix domain-containing protein | insig. | 30 | 94 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1460 | | putative PAS/PAC sensor protein (RefSeq) | cofit | 29 | 80 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS31420 | | LuxR family transcriptional regulator | insig. | 29 | 86 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS17870 | | Fis family transcriptional regulator | insig. | 27 | 92 |
| | Shewanella sp. ANA-3 | Shewana3_1053 | | multi-sensor hybrid histidine kinase (RefSeq) | insig. | 39 | 55 |
| | Caulobacter crescentus NA1000 | CCNA_02967 | | PAS-family sensor histidine kinase | cofit | 36 | 82 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_02967 | | PAS-family sensor histidine kinase | insig. | 36 | 82 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS06085 | | sigma-54-dependent Fis family transcriptional regulator | strong | 28 | 90 |
| | Ralstonia solanacearum UW163 | UW163_RS07540 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 28 | 90 |
| | Shewanella loihica PV-4 | Shew_3419 | | two component transcriptional regulator (RefSeq) | insig. | 38 | 57 |
| | Caulobacter crescentus NA1000 | CCNA_02659 | | two-component receiver domain protein | cofit | 32 | 66 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_02659 | | two-component receiver domain protein | cofit | 32 | 66 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS01750 | | sigma-54 dependent transcriptional regulator | strong | 26 | 94 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2677 | | response regulator receiver sensor hybrid histidine kinase (RefSeq) | sig. | 29 | 86 |
| | Ralstonia solanacearum GMI1000 | RS_RS14035 | | sigma-54-dependent Fis family transcriptional regulator | strong | 27 | 94 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS05090 | | response regulator | insig. | 27 | 87 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1508 | | DNA-binding response regulator | insig. | 39 | 56 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1779.1 | | Two-component response regulator CreB | insig. | 34 | 67 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_17725 | | TMAO reductase system sensor histidine kinase/response regulator TorS | insig. | 33 | 62 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4533 | | Transcriptional regulatory protein CitB, DpiA | cofit | 33 | 62 |
| | Pseudomonas sp. RS175 | PFR28_01718 | | Response regulator receiver protein CpdR | sig. | 32 | 86 |
| | Methylophilus sp. DMC18 | GFF1277 | | Regulatory protein AtoC | insig. | 31 | 69 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_2416 | srrA | two component transcriptional regulator, winged helix family | sig. | 31 | 84 |
| | Rhodopseudomonas palustris CGA009 | TX73_010685 | | response regulator | insig. | 29 | 78 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS11155 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 27 | 94 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS14785 | | response regulator | strong | 31 | 78 |
| | Pseudomonas sp. SVBP6 | COO64_RS14350 | | response regulator | no data | 33 | 88 |
| | Alteromonas macleodii MIT1002 | MIT1002_00654 | | Signal transduction histidine-protein kinase BarA | insig. | 38 | 53 |
| | Rhizobium sp. OAE497 | ABIE40_RS27375 | | response regulator | insig. | 45 | 45 |
| | Agrobacterium fabrum C58 | Atu4671 | | response regulator | insig. | 41 | 47 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3612 | | Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal | sig. | 33 | 56 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3612 | | Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal | insig. | 33 | 56 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS19665 | | response regulator | no data | 30 | 93 |
| | Rhizobium sp. OAE497 | ABIE40_RS26630 | | response regulator | insig. | 33 | 72 |
| | Agrobacterium fabrum C58 | Atu4638 | | two component response regulator | insig. | 29 | 92 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS12050 | | response regulator transcription factor | insig. | 25 | 88 |
| | Agrobacterium fabrum C58 | Atu5378 | | two component response regulator | no data | 32 | 45 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02954 | | Sensor kinase CckA | no data | 31 | 86 |
| | Dechlorosoma suillum PS | Dsui_1617 | | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | no data | 33 | 55 |
| | Xanthobacter sp. DMC5 | GFF3208 | | Transcriptional regulatory protein QseB | insig. | 33 | 56 |
| | Pseudomonas sp. S08-1 | OH686_06720 | | probable sensor/response regulator hybrid | insig. | 29 | 85 |
| | Azospirillum brasilense Sp245 | AZOBR_RS17625 | | Nodulation protein W | no data | 28 | 86 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_22615 | | nodulation protein NolW | no data | 27 | 94 |