Homologs of AMB_RS10435 from Magnetospirillum magneticum AMB-1

DUF4113 domain-containing protein
SEED: Error-prone, lesion bypass DNA polymerase V (UmuC)
KEGG: DNA polymerase V

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Magnetospirillum magneticum AMB-1 AMB_RS10435 DUF4113 domain-containing protein insig. 100 100
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10180 SOS mutagenesis and repair protein UmuC insig. 46 100
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07635 SOS mutagenesis and repair protein UmuC insig. 43 99
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_21210 SOS mutagenesis and repair protein UmuC cofit 45 100
o Synechococcus elongatus PCC 7942 Synpcc7942_1550 umuC DNA-directed DNA polymerase insig. 43 100
o Enterobacter asburiae PDN3 EX28DRAFT_1261 Nucleotidyltransferase/DNA polymerase involved in DNA repair insig. 43 99
o Desulfovibrio vulgaris Hildenborough JW710 DVU2906 umuC umuC protein (TIGR) insig. 44 99
  Enterobacter asburiae PDN3 EX28DRAFT_1553 Nucleotidyltransferase/DNA polymerase involved in DNA repair insig. 44 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3989 Error-prone, lesion bypass DNA polymerase V (UmuC) insig. 43 99
o Desulfovibrio vulgaris Miyazaki F DvMF_1434 DNA-directed DNA polymerase (RefSeq) insig. 43 98
o Pseudomonas syringae pv. syringae B728a Psyr_1425 DNA-directed DNA polymerase insig. 41 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1425 DNA-directed DNA polymerase insig. 41 100
o Pseudomonas sp. RS175 PFR28_01192 Protein UmuC cofit 41 98
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3541 Nucleotidyltransferase/DNA polymerase involved in DNA repair insig. 44 100
o Escherichia coli ECRC101 OKFHMN_28265 umuC DNA polymerase V catalytic protein insig. 42 99
o Escherichia coli ECRC102 NIAGMN_27955 umuC DNA polymerase V catalytic protein insig. 42 99
o Escherichia coli ECRC98 JDDGAC_06245 umuC DNA polymerase V catalytic protein no data 42 99
o Escherichia coli ECRC99 KEDOAH_25280 umuC DNA polymerase V catalytic protein no data 42 99
o Escherichia coli ECRC101 MCAODC_21905 umuC DNA polymerase V catalytic protein insig. 42 99
  Pseudomonas syringae pv. syringae B728a Psyr_2761 DNA-directed DNA polymerase strong 40 100
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2761 DNA-directed DNA polymerase strong 40 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02505 Protein UmuC insig. 42 99
o Klebsiella michiganensis M5al BWI76_RS12385 DNA polymerase V subunit UmuC sig. 42 99
o Escherichia coli ECOR38 HEPCGN_24725 umuC DNA polymerase V catalytic protein cofit 42 99
o Escherichia coli BL21 ECD_01159 translesion error-prone DNA polymerase V subunit; DNA polymerase activity no data 42 99
o Escherichia coli ECOR27 NOLOHH_20750 umuC DNA polymerase V catalytic protein no data 42 99
o Escherichia coli BW25113 b1184 umuC DNA polymerase V subunit UmuC (NCBI) strong 42 99
o Pantoea sp. MT58 IAI47_10585 translesion error-prone DNA polymerase V subunit UmuC insig. 42 99
o Escherichia fergusonii Becca EFB2_02748 Protein UmuC insig. 42 99
o Escherichia coli Nissle 1917 ECOLIN_RS07160 DNA polymerase V catalytic protein no data 42 99
o Escherichia coli ECRC62 BNILDI_18915 umuC DNA polymerase V catalytic protein insig. 42 99
o Rahnella sp. WP5 EX31_RS00805 translesion error-prone DNA polymerase V subunit UmuC insig. 41 99
  Enterobacter asburiae PDN3 EX28DRAFT_1528 Nucleotidyltransferase/DNA polymerase involved in DNA repair insig. 40 99
o Erwinia tracheiphila SCR3 LU632_RS01730 umuC translesion error-prone DNA polymerase V subunit UmuC insig. 43 99
o Enterobacter sp. TBS_079 MPMX20_02045 Protein UmuC insig. 41 99
o Bosea sp. OAE506 ABIE41_RS06700 Y-family DNA polymerase insig. 40 99
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1258 Error-prone, lesion bypass DNA polymerase V (UmuC) insig. 40 99
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12020 hypothetical protein insig. 39 99
o Pseudomonas sp. S08-1 OH686_22885 Error-prone, lesion bypass DNA polymerase V (UmuC) insig. 43 100
o Serratia liquefaciens MT49 IAI46_15980 translesion error-prone DNA polymerase V subunit UmuC insig. 39 99
o Kangiella aquimarina DSM 16071 B158DRAFT_1835 Nucleotidyltransferase/DNA polymerase involved in DNA repair strong 39 98
  Klebsiella michiganensis M5al BWI76_RS12675 putative UV protection and mutation protein insig. 41 99
o Rhodanobacter denitrificans MT42 LRK55_RS18255 Y-family DNA polymerase cofit 40 99
o Shewanella oneidensis MR-1 SOA0012 umuC umuC protein (NCBI ptt file) strong 37 99
o Shewanella sp. ANA-3 Shewana3_1832 DNA-repair protein (RefSeq) cofit 37 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5450 Error-prone, lesion bypass DNA polymerase V (UmuC) sig. 36 99
  Shewanella sp. ANA-3 Shewana3_4172 DNA-directed DNA polymerase (RefSeq) insig. 34 99
  Enterobacter sp. TBS_079 MPMX20_04742 Protein UmuC insig. 46 47
  Magnetospirillum magneticum AMB-1 AMB_RS16860 DUF4113 domain-containing protein cofit 77 18
  Herbaspirillum seropedicae SmR1 HSERO_RS17370 hypothetical protein insig. 53 27
  Enterobacter sp. TBS_079 MPMX20_04747 Protein UmuC insig. 36 50
  Shewanella sp. ANA-3 Shewana3_4349 umuC protein (RefSeq) insig. 33 53
  Rhizobium sp. OAE497 ABIE40_RS07310 DNA polymerase IV insig. 28 92
  Sinorhizobium meliloti 1021 SMc01373 DNA polymerase IV insig. 27 92
  Desulfovibrio vulgaris Hildenborough JW710 DVU0071 dinP DNA polymerase IV (TIGR) insig. 29 76
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07745 DNA polymerase IV insig. 26 91
  Caulobacter crescentus NA1000 CCNA_02550 DNA polymerase IV-kappa DinB sig. 26 92
  Caulobacter crescentus NA1000 Δfur CCNA_02550 DNA polymerase IV-kappa DinB cofit 26 92
  Pseudomonas syringae pv. syringae B728a Psyr_0736 umuC protein insig. 55 18
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0736 umuC protein insig. 55 18
  Agrobacterium fabrum C58 Atu1294 DNA polymerase IV insig. 27 92
  Azospirillum sp. SherDot2 MPMX19_05504 DNA polymerase IV insig. 27 84
  Magnetospirillum magneticum AMB-1 AMB_RS03210 DNA polymerase IV cofit 29 84
  Bosea sp. OAE506 ABIE41_RS18185 DNA polymerase IV insig. 24 92
  Desulfovibrio vulgaris Miyazaki F DvMF_2313 DNA-directed DNA polymerase (RefSeq) sig. 27 77
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3438 Nucleotidyltransferase/DNA polymerase involved in DNA repair insig. 26 91
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08360 DNA polymerase IV insig. 25 92
  Rhodopseudomonas palustris CGA009 TX73_016210 DNA polymerase IV insig. 32 52
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4535.1 DNA polymerase IV (EC 2.7.7.7) insig. 27 76
  Rhodospirillum rubrum S1H Rru_A3530 DNA-directed DNA polymerase (NCBI) insig. 28 85
  Lysobacter sp. OAE881 ABIE51_RS17370 DNA polymerase insig. 25 94
  Azospirillum brasilense Sp245 AZOBR_RS21200 DNA polymerase IV insig. 26 82
  Rhodanobacter denitrificans MT42 LRK55_RS11065 DNA polymerase IV insig. 29 52
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20685 DNA polymerase IV insig. 26 60
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11335 DNA polymerase IV insig. 29 52
  Mycobacterium tuberculosis H37Rv Rv1537 Probable DNA polymerase IV DinX (pol IV 1) (DNA nucleotidyltransferase (DNA-directed)) insig. 28 65
  Phaeobacter inhibens DSM 17395 PGA1_c32470 DNA polymerase IV insig. 25 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2007 Error-prone, lesion bypass DNA polymerase V (UmuC) sig. 39 27
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06545 DNA polymerase IV sig. 30 51
  Mycobacterium tuberculosis H37Rv Rv3056 Possible DNA-damage-inducible protein P DinP (DNA polymerase V) (pol IV 2) (DNA nucleotidyltransferase (DNA-directed)) insig. 28 76
  Lysobacter sp. OAE881 ABIE51_RS08465 DNA polymerase IV insig. 30 47
  Sinorhizobium meliloti 1021 SMa2355 DNA polymerase IV insig. 26 61
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS05230 DNA polymerase IV cofit 29 63
  Bifidobacterium breve UCC2003 BBR_RS19045 DNA polymerase IV sig. 25 91
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08955 DNA polymerase IV insig. 30 51
  Rhizobium sp. OAE497 ABIE40_RS27830 DNA polymerase IV insig. 30 51
  Dinoroseobacter shibae DFL-12 Dshi_0385 DNA-directed DNA polymerase (RefSeq) insig. 26 85
  Agrobacterium fabrum C58 Atu5469 DNA polymerase IV insig. 30 51
  Marinobacter adhaerens HP15 HP15_737 DNA polymerase IV cofit 28 52
  Rhodanobacter sp. FW510-T8 OKGIIK_12560 dinB DNA polymerase IV insig. 30 53
  Bacteroides stercoris CC31F HMPREF1181_RS13945 DNA polymerase IV insig. 27 51
  Ralstonia sp. UNC404CL21Col ABZR87_RS13550 DNA polymerase IV insig. 23 64
  Rhodanobacter sp. FW510-T8 OKGIIK_12530 UmuC domain-containing protein insig. 26 96
  Pseudomonas syringae pv. syringae B728a Psyr_1397 DNA-directed DNA polymerase insig. 28 52
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1397 DNA-directed DNA polymerase insig. 28 52
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2408 Nucleotidyltransferase/DNA polymerase involved in DNA repair strong 28 35
  Ralstonia solanacearum PSI07 RPSI07_RS15755 DNA polymerase IV insig. 26 53
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS01730 DNA polymerase IV insig. 27 53
  Ralstonia solanacearum UW163 UW163_RS15040 DNA polymerase IV insig. 27 53
  Enterobacter asburiae PDN3 EX28DRAFT_2657 Nucleotidyltransferase/DNA polymerase involved in DNA repair insig. 26 61