Homologs of ABIE41_RS07820 from Bosea sp. OAE506

TRAP transporter large permease
SEED: TRAP-type C4-dicarboxylate transport system, large permease component

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Bosea sp. OAE506 ABIE41_RS07820 TRAP transporter large permease insig. 100 100
o Agrobacterium fabrum C58 Atu3135 ABC transporter permease strong 70 100
o Sinorhizobium meliloti 1021 SM_b21351 C4-dicarboxylate large membrane transport protein insig. 69 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF795 TRAP-type C4-dicarboxylate transport system, large permease component insig. 54 100
o Azospirillum sp. SherDot2 MPMX19_05803 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 56 99
o Azospirillum brasilense Sp245 AZOBR_RS30120 C4-dicarboxylate ABC transporter permease insig. 56 99
o Variovorax sp. OAS795 ABID97_RS10330 TRAP transporter large permease strong 57 94
o Caulobacter crescentus NA1000 CCNA_01515 C4-dicarboxylate transporter large subunit sig. 58 96
o Caulobacter crescentus NA1000 Δfur CCNA_01515 C4-dicarboxylate transporter large subunit cofit 58 96
o Lysobacter sp. OAE881 ABIE51_RS02840 TRAP transporter large permease insig. 55 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.203.1 TRAP-type C4-dicarboxylate transport system, large permease component insig. 55 100
o Enterobacter sp. TBS_079 MPMX20_04347 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 49 99
o Rahnella sp. WP5 EX31_RS08020 TRAP transporter large permease insig. 49 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05326 TRAP transporter, DctM subunit insig. 48 100
o Pectobacterium carotovorum WPP14 HER17_RS19685 TRAP transporter large permease cofit 48 99
o Paraburkholderia graminis OAS925 ABIE53_006500 tripartite ATP-independent transporter DctM subunit sig. 48 99
o Burkholderia phytofirmans PsJN BPHYT_RS24185 C4-dicarboxylate ABC transporter permease insig. 48 99
o Pseudomonas fluorescens FW300-N2C3 AO356_23045 hypothetical protein insig. 48 98
o Ralstonia sp. UNC404CL21Col ABZR87_RS21100 TRAP transporter large permease insig. 48 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_485 TRAP-type C4-dicarboxylate transport system, large permease component insig. 49 95
o Pseudomonas fluorescens SBW25 PFLU_RS19305 TRAP transporter large permease insig. 49 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19305 TRAP transporter large permease insig. 49 99
o Pantoea sp. MT58 IAI47_03220 TRAP transporter large permease insig. 48 95
o Pseudomonas sp. RS175 PFR28_02440 C4-dicarboxylate TRAP transporter large permease protein DctM strong 49 95
o Pseudomonas simiae WCS417 PS417_17380 membrane protein insig. 50 99
o Variovorax sp. SCN45 GFF2920 TRAP-type C4-dicarboxylate transport system, large permease component insig. 49 99
o Pseudomonas syringae pv. syringae B728a Psyr_0898 TRAP dicarboxylate transporter, DctM subunit insig. 48 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0898 TRAP dicarboxylate transporter, DctM subunit insig. 48 99
o Pseudomonas putida KT2440 PP_1167 D-glucuronate / D-galacturonate TRAP transporter, large permease component (from data) strong 49 100
o Pseudomonas stutzeri RCH2 Psest_0361 TRAP transporter, DctM subunit insig. 48 100
o Acidovorax sp. GW101-3H11 Ac3H11_3955 TRAP-type C4-dicarboxylate transport system, large permease component insig. 48 99
o Alteromonas macleodii MIT1002 MIT1002_02428 Neu5Ac permease insig. 47 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03837 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 48 99
o Escherichia coli ECRC62 BNILDI_07135 TRAP transporter large permease insig. 48 99
o Escherichia coli ECOR27 NOLOHH_11090 dctQ Tripartite ATP-independent periplasmic transporter, DctM component cofit 45 99
o Escherichia coli Nissle 1917 ECOLIN_RS17390 TRAP transporter large permease subunit insig. 47 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2273 Predicted rhamnogalacturonide-specific TRAP-type transporter, large transmembrane component RhiC insig. 42 97
o Klebsiella michiganensis M5al BWI76_RS24135 c4-dicarboxylate permease insig. 44 98
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3132 TRAP-type C4-dicarboxylate transport system, large permease component insig. 47 99
  Azospirillum brasilense Sp245 AZOBR_RS27150 membrane protein insig. 45 99
  Desulfovibrio vulgaris Miyazaki F DvMF_1931 TRAP dicarboxylate transporter, DctM subunit (RefSeq) insig. 40 98
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3627 TRAP transporter, DctM subunit insig. 46 100
  Azospirillum sp. SherDot2 MPMX19_06063 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 41 100
  Bosea sp. OAE506 ABIE41_RS18670 TRAP transporter large permease insig. 43 99
o Dinoroseobacter shibae DFL-12 Dshi_0956 TRAP dicarboxylate transporter, DctM subunit (RefSeq) insig. 41 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF174 TRAP-type C4-dicarboxylate transport system, large permease component no data 40 99
  Sinorhizobium meliloti 1021 SMc00273 transmembrane protein insig. 41 96
  Azospirillum brasilense Sp245 AZOBR_RS09595 C4-dicarboxylate ABC transporter permease sig. 37 99
  Acidovorax sp. GW101-3H11 Ac3H11_2071 TRAP-type C4-dicarboxylate transport system, large permease component insig. 39 89
  Azospirillum brasilense Sp245 AZOBR_RS26625 dehydroascorbate transporter insig. 39 97
  Acidovorax sp. GW101-3H11 Ac3H11_163 TRAP-type C4-dicarboxylate transport system, large permease component insig. 38 95
  Cupriavidus basilensis FW507-4G11 RR42_RS34990 ABC transporter permease insig. 37 99
  Variovorax sp. SCN45 GFF6470 TRAP-type C4-dicarboxylate transport system, large permease component insig. 38 95
  Pseudomonas sp. RS175 PFR28_00121 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 38 99
  Fusobacterium nucleatum SB010 HUW76_03975 TRAP transporter large permease strong 37 97
  Desulfovibrio vulgaris Hildenborough JW710 DVU2823 dctM TRAP dicarboxylate transporter family protein (TIGR) insig. 39 98
o Rhodopseudomonas palustris CGA009 TX73_010560 TRAP transporter large permease subunit strong 37 99
o Magnetospirillum magneticum AMB-1 AMB_RS04550 C4-dicarboxylate ABC transporter permease insig. 37 99
  Sinorhizobium meliloti 1021 SM_b21436 C4-dicarboxylate transport system, permease large protein transmembrane insig. 37 97
  Pseudomonas stutzeri RCH2 Psest_4270 TRAP transporter, DctM subunit strong 38 100
o Dechlorosoma suillum PS Dsui_3153 TRAP transporter, DctM subunit sig. 37 99
  Bosea sp. OAE506 ABIE41_RS01370 TRAP transporter large permease insig. 37 98
  Bosea sp. OAE506 ABIE41_RS03210 TRAP transporter large permease insig. 39 99
  Azospirillum sp. SherDot2 MPMX19_00661 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 37 99
  Bosea sp. OAE506 ABIE41_RS06675 TRAP transporter large permease insig. 36 98
  Rhizobium sp. OAE497 ABIE40_RS25810 TRAP transporter large permease insig. 36 96
o Castellaniella sp019104865 MT123 ABCV34_RS12260 TRAP transporter large permease insig. 38 94
  Sinorhizobium meliloti 1021 SM_b20444 hypothetical protein insig. 36 98
  Sinorhizobium meliloti 1021 SM_b20297 permease insig. 38 90
  Sinorhizobium meliloti 1021 SM_b20372 hypothetical protein insig. 35 97
o Herbaspirillum seropedicae SmR1 HSERO_RS04250 C4-dicarboxylate ABC transporter permease sig. 37 99
  Dinoroseobacter shibae DFL-12 Dshi_2753 TRAP dicarboxylate transporter, DctM subunit (RefSeq) insig. 41 90
  Pseudomonas sp. RS175 PFR28_01613 Sialic acid TRAP transporter large permease protein SiaM insig. 37 94
  Acidovorax sp. GW101-3H11 Ac3H11_3520 TRAP-type C4-dicarboxylate transport system, large permease component insig. 37 98
  Castellaniella sp019104865 MT123 ABCV34_RS07855 TRAP transporter large permease insig. 42 97
  Rhodospirillum rubrum S1H Rru_A3676 TRAP dicarboxylate transporter, DctM subunit (NCBI) strong 37 99
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1781 TRAP-type C4-dicarboxylate transport system, large permease component insig. 40 99
  Pseudomonas fluorescens FW300-N2C3 AO356_25640 L-dehydroascorbate transporter large permease subunit insig. 37 94
  Escherichia coli ECOR38 HEPCGN_01270 C4-dicarboxylate ABC transporter cofit 39 91
  Bosea sp. OAE506 ABIE41_RS23665 TRAP transporter large permease insig. 36 98
  Variovorax sp. OAS795 ABID97_RS19635 TRAP transporter large permease insig. 38 95
  Acidovorax sp. GW101-3H11 Ac3H11_1228 TRAP-type C4-dicarboxylate transport system, large permease component insig. 38 99
  Desulfovibrio vulgaris Miyazaki F DvMF_2137 TRAP dicarboxylate transporter, DctM subunit (RefSeq) cofit 40 98
  Agrobacterium fabrum C58 Atu2743 hypothetical protein insig. 37 97
  Bosea sp. OAE506 ABIE41_RS24150 TRAP transporter large permease subunit insig. 37 97
  Castellaniella sp019104865 MT123 ABCV34_RS05060 TRAP transporter large permease insig. 40 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5230 TRAP-type C4-dicarboxylate transport system, large permease component insig. 37 99
  Bosea sp. OAE506 ABIE41_RS16395 TRAP transporter large permease insig. 40 98
  Bosea sp. OAE506 ABIE41_RS08865 TRAP transporter large permease insig. 40 99
  Vibrio cholerae E7946 ATCC 55056 CSW01_08915 ABC transporter permease insig. 39 97
  Vibrio cholerae E7946 ATCC 55056 CSW01_09640 C4-dicarboxylate ABC transporter permease insig. 35 99
  Azospirillum brasilense Sp245 AZOBR_RS04640 C4-dicarboxylate ABC transporter insig. 36 98
  Variovorax sp. OAS795 ABID97_RS26070 TRAP transporter large permease subunit no data 38 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1302 TRAP-type C4-dicarboxylate transport system, large permease component insig. 36 94
  Shewanella sp. ANA-3 Shewana3_1414 TRAP dicarboxylate transporter, DctM subunit (RefSeq) strong 34 99
  Sinorhizobium meliloti 1021 SM_b20035 ABC transporter permease insig. 38 95
  Shewanella oneidensis MR-1 SO3136 dctM C4-dicarboxylate transport protein (NCBI ptt file) insig. 34 99
  Azospirillum brasilense Sp245 AZOBR_RS16150 C4-dicarboxylate ABC transporter insig. 35 92
  Castellaniella sp019104865 MT123 ABCV34_RS11535 TRAP transporter large permease subunit insig. 38 93
  Dinoroseobacter shibae DFL-12 Dshi_1832 TRAP dicarboxylate transporter, DctM subunit (RefSeq) sig. 34 96