Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS15405 | | helix-turn-helix transcriptional regulator | insig. | 100 | 100 |
| Mycobacterium tuberculosis H37Rv | Rv0386 | | Probable transcriptional regulatory protein (probably LuxR/UhpA-family) | insig. | 50 | 38 |
| Pseudomonas sp. RS175 | PFR28_02434 | | HTH-type transcriptional regulator MalT | insig. | 53 | 34 |
| Pseudomonas fluorescens SBW25 | PFLU_RS10665 | | helix-turn-helix transcriptional regulator | insig. | 51 | 34 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS10665 | | helix-turn-helix transcriptional regulator | sig. | 51 | 34 |
| Mycobacterium tuberculosis H37Rv | Rv2488c | | Probable transcriptional regulatory protein (LuxR-family) | insig. | 52 | 41 |
| Rhodopseudomonas palustris CGA009 | TX73_006410 | | response regulator transcription factor | insig. | 51 | 33 |
| Pseudomonas simiae WCS417 | PS417_10605 | | LuxR family transcriptional regulator | insig. | 51 | 34 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4524 | | Sensory box transcriptional regulator, LuxR family | no data | 51 | 34 |
| Mycobacterium tuberculosis H37Rv | Rv0890c | | Probable transcriptional regulatory protein (probably LuxR-family) | insig. | 52 | 32 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_23110 | | LuxR family transcriptional regulator | insig. | 52 | 32 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_501 | | Sensory box transcriptional regulator, LuxR family | insig. | 52 | 32 |
| Pseudomonas stutzeri RCH2 | Psest_3878 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | sig. | 48 | 35 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_3500 | | Sensory box transcriptional regulator, LuxR family | insig. | 49 | 34 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS05865 | | hypothetical protein | insig. | 48 | 36 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS21335 | | response regulator transcription factor | sig. | 47 | 34 |
| Rhodanobacter denitrificans MT42 | LRK55_RS14195 | | response regulator transcription factor | no data | 47 | 34 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS14480 | | response regulator transcription factor | strong | 47 | 34 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_03330 | citB | DNA-binding response regulator | cofit | 47 | 34 |
o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0118 | | Bacterial regulatory proteins, luxR family | insig. | 29 | 90 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3859.1 | | Two-component system regulatory protein | sig. | 45 | 34 |
| Caulobacter crescentus NA1000 | CCNA_01208 | | two-component response regulator | sig. | 48 | 38 |
| Caulobacter crescentus NA1000 Δfur | CCNA_01208 | | two-component response regulator | cofit | 48 | 38 |
| Serratia liquefaciens MT49 | IAI46_12590 | | helix-turn-helix transcriptional regulator | insig. | 50 | 32 |
| Lysobacter sp. OAE881 | ABIE51_RS14590 | | response regulator transcription factor | sig. | 45 | 34 |
| Sinorhizobium meliloti 1021 | SM_b20468 | | sensory transduction DNA-binding response regulator protein | insig. | 52 | 34 |
| Mycobacterium tuberculosis H37Rv | Rv1358 | | Probable transcriptional regulatory protein | insig. | 48 | 34 |
| Azospirillum sp. SherDot2 | MPMX19_04108 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | insig. | 45 | 36 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS09580 | | response regulator transcription factor | insig. | 49 | 36 |
| Pseudomonas stutzeri RCH2 | Psest_1446 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | no data | 46 | 32 |
| Agrobacterium fabrum C58 | Atu2419 | | transcriptional regulator, LuxR family | insig. | 46 | 35 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS13200 | | transcriptional regulator | insig. | 46 | 35 |
| Marinobacter adhaerens HP15 | HP15_3660 | | two-component response regulator | insig. | 44 | 35 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_18885 | | helix-turn-helix transcriptional regulator | insig. | 40 | 35 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1879 | | ATP-dependent transcriptional regulator, MalT-like, LuxR family (RefSeq) | insig. | 49 | 39 |
| Variovorax sp. SCN45 | GFF3176 | | Two-component transcriptional response regulator, LuxR family | insig. | 48 | 39 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS03740 | | response regulator transcription factor | insig. | 44 | 37 |
| Acidovorax sp. GW101-3H11 | Ac3H11_2109 | | Nitrate/nitrite response regulator protein | insig. | 45 | 39 |
| Escherichia coli BL21 | ECD_03553 | | response regulator in two-component regulatory system wtih UhpB | insig. | 48 | 40 |
| Escherichia fergusonii Becca | EFB2_00029 | | Transcriptional regulatory protein UhpA | insig. | 48 | 40 |
| Escherichia coli ECOR27 | NOLOHH_07335 | uhpA_G97D | DNA-binding response regulator UhpA | cofit | 48 | 40 |
| Escherichia coli ECOR38 | HEPCGN_13905 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 48 | 40 |
| Escherichia coli ECRC100 | OKFHMN_15180 | uhpA_G97D | DNA-binding response regulator UhpA | cofit | 48 | 40 |
| Escherichia coli ECRC101 | MCAODC_05690 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 48 | 40 |
| Escherichia coli ECRC102 | NIAGMN_12940 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 48 | 40 |
| Escherichia coli ECRC62 | BNILDI_04190 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 48 | 40 |
| Escherichia coli ECRC98 | JDDGAC_18805 | uhpA_G97D | DNA-binding response regulator UhpA | cofit | 48 | 40 |
| Escherichia coli ECRC99 | KEDOAH_12965 | uhpA_G97D | DNA-binding response regulator UhpA | no data | 48 | 40 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00031 | | Transcriptional regulatory protein UhpA | insig. | 48 | 40 |
| Escherichia coli Nissle 1917 | ECOLIN_RS21160 | | transcriptional regulator UhpA | insig. | 48 | 40 |
| Escherichia coli BW25113 | b3669 | uhpA | DNA-binding response regulator in two-component regulatory system wtih UhpB (NCBI) | sig. | 48 | 40 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_181 | | Two-component response regulator | insig. | 45 | 34 |
| Marinobacter adhaerens HP15 | HP15_1855 | | HTH-type transcriptional regulator MalT | insig. | 43 | 39 |
| Rhizobium sp. OAE497 | ABIE40_RS27605 | | response regulator transcription factor | insig. | 43 | 36 |
| Serratia liquefaciens MT49 | IAI46_00435 | | transcriptional regulator UhpA | insig. | 48 | 39 |
| Pseudomonas fluorescens SBW25 | PFLU_RS11030 | | response regulator transcription factor | insig. | 45 | 41 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS11030 | | response regulator transcription factor | sig. | 45 | 41 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2010 | | DNA-binding response regulator, LuxR family | no data | 42 | 36 |
| Enterobacter sp. TBS_079 | MPMX20_01965 | | Response regulator protein TmoT | insig. | 48 | 32 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.94.1 | | Transcriptional regulator, LuxR family | insig. | 48 | 32 |
| Klebsiella michiganensis M5al | BWI76_RS27800 | | DNA-binding response regulator | sig. | 51 | 37 |
| Rhodanobacter denitrificans MT42 | LRK55_RS11330 | | response regulator transcription factor | insig. | 49 | 33 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS11600 | | response regulator transcription factor | insig. | 49 | 33 |
| Rhodanobacter denitrificans MT42 | LRK55_RS02890 | | response regulator transcription factor | insig. | 47 | 36 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS03140 | | response regulator transcription factor | insig. | 47 | 36 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_10010 | citB | DNA-binding response regulator | insig. | 47 | 36 |
| Azospirillum sp. SherDot2 | MPMX19_04589 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | insig. | 47 | 32 |
| Pseudomonas fluorescens SBW25 | PFLU_RS12370 | | response regulator transcription factor | insig. | 45 | 34 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS12370 | | response regulator transcription factor | insig. | 45 | 34 |
| Pseudomonas simiae WCS417 | PS417_11585 | | LuxR family transcriptional regulator | insig. | 45 | 34 |
| Agrobacterium fabrum C58 | Atu3318 | | LuxR family transcriptional regulator | insig. | 41 | 38 |
| Pseudomonas sp. RS175 | PFR28_01868 | | Transcriptional regulatory protein DegU | no data | 41 | 38 |
| Sinorhizobium meliloti 1021 | SM_b21520 | | two-component response regulator protein | insig. | 40 | 37 |
| Synechococcus elongatus PCC 7942 | Synpcc7942_2264 | | transcriptional regulator, LuxR family | strong | 36 | 43 |
| Pseudomonas sp. S08-1 | OH686_16560 | | Two-component transcriptional response regulator, LuxR family | insig. | 46 | 32 |
| Variovorax sp. SCN45 | GFF3032 | | Two-component transcriptional response regulator, LuxR family | insig. | 43 | 34 |
| Rhizobium sp. OAE497 | ABIE40_RS23610 | | response regulator transcription factor | insig. | 42 | 35 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS12065 | | hypothetical protein | insig. | 41 | 41 |
| Ralstonia solanacearum GMI1000 | RS_RS22630 | | helix-turn-helix transcriptional regulator | insig. | 48 | 36 |
| Caulobacter crescentus NA1000 | CCNA_00823 | | LuxR-like DNA-binding protein | no data | 48 | 32 |
| Caulobacter crescentus NA1000 Δfur | CCNA_00823 | | LuxR-like DNA-binding protein | no data | 48 | 32 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01738 | | PAS domain S-box-containing protein | insig. | 47 | 34 |
| Rhizobium sp. OAE497 | ABIE40_RS14675 | | response regulator transcription factor | insig. | 44 | 35 |
| Sinorhizobium meliloti 1021 | SM_b20610 | | two-component response regulator protein | insig. | 44 | 35 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1940 | | regulatory protein, LuxR:Response regulator receiver | no data | 40 | 39 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1940 | | regulatory protein, LuxR:Response regulator receiver | no data | 40 | 39 |
| Rhodospirillum rubrum S1H | Rru_A2179 | | Transcriptional Regulator, LuxR family (NCBI) | insig. | 50 | 36 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF394 | | transcriptional regulator, LuxR family | cofit | 49 | 36 |
| Rahnella sp. WP5 | EX31_RS02050 | | LuxR family transcriptional regulator | insig. | 48 | 36 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS10510 | | alpha/beta fold hydrolase | insig. | 44 | 35 |
| Rhodopseudomonas palustris CGA009 | TX73_007655 | | response regulator transcription factor | cofit | 43 | 40 |
| Variovorax sp. SCN45 | GFF2712 | | no description | insig. | 40 | 39 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_26265 | | LuxR family transcriptional regulator | no data | 39 | 38 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1128 | | Two-component response regulator | insig. | 39 | 38 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF304 | | Transcriptional regulatory protein UhpA | insig. | 46 | 40 |
| Shewanella amazonensis SB2B | Sama_1446 | | response regulator receiver protein (RefSeq) | sig. | 44 | 34 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_07695 | | LuxR family transcriptional regulator | insig. | 46 | 39 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4961.1 | | Two-component system regulatory protein | insig. | 45 | 36 |
| Dinoroseobacter shibae DFL-12 | Dshi_1819 | | transcriptional regulator, LuxR family (RefSeq) | insig. | 44 | 39 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1483 | | transcriptional regulator, LuxR family | no data | 43 | 36 |