| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Shewanella sp. ANA-3 | Shewana3_1930 | | AraC family transcriptional regulator (RefSeq) | insig. | 100 | 100 |
| o | Alteromonas macleodii MIT1002 | MIT1002_02469 | | Carnitine catabolism transcriptional activator | insig. | 31 | 84 |
| o | Shewanella amazonensis SB2B | Sama_2715 | | putative regulatory protein (RefSeq) | insig. | 27 | 88 |
| o | Pseudomonas stutzeri RCH2 | Psest_0755 | | Bacterial regulatory helix-turn-helix proteins, AraC family. | insig. | 27 | 84 |
| o | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS09025 | | helix-turn-helix domain-containing protein | insig. | 24 | 89 |
| o | Bacteroides ovatus ATCC 8483 | BACOVA_01477 | | transcriptional regulator, AraC family | insig. | 28 | 84 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1906 | | transcriptional regulator (NCBI ptt file) | insig. | 31 | 59 |
| | Variovorax sp. SCN45 | GFF7055 | | hypothetical protein | no data | 25 | 79 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_6090 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | sig. | 39 | 29 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS07400 | | helix-turn-helix domain-containing protein | sig. | 30 | 50 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS01420 | | helix-turn-helix domain-containing protein | insig. | 31 | 60 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_3671 | | AraC-type DNA-binding domain-containing proteins | insig. | 27 | 48 |
| o | Erwinia amylovora T8 | OLJFJH_04495 | | AraC family transcriptional regulator | insig. | 25 | 86 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21045 | | AraC family transcriptional regulator | insig. | 38 | 29 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS10275 | | GlxA family transcriptional regulator | insig. | 39 | 29 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS10275 | | GlxA family transcriptional regulator | insig. | 39 | 29 |
| | Pseudomonas simiae WCS417 | PS417_09670 | | AraC family transcriptional regulator | strong | 39 | 29 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS01185 | | helix-turn-helix domain-containing protein | insig. | 30 | 60 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS22610 | | AraC family transcriptional regulator | insig. | 29 | 50 |
| | Rhizobium sp. OAE497 | ABIE40_RS27910 | | GlxA family transcriptional regulator | insig. | 38 | 30 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS20670 | | transcriptional regulator FtrA | insig. | 36 | 29 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02137 | | HTH-type transcriptional regulator CdhR | cofit | 33 | 35 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS14990 | | helix-turn-helix transcriptional regulator | insig. | 26 | 80 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS14990 | | helix-turn-helix transcriptional regulator | sig. | 26 | 80 |
| | Pseudomonas sp. DMC3 | GFF735 | | HTH-type transcriptional regulator CdhR | insig. | 34 | 32 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2369 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 39 | 29 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1430 | | transcriptional regulator (NCBI ptt file) | sig. | 23 | 85 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_156 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | no data | 39 | 29 |
| | Pseudomonas sp. RS175 | PFR28_02891 | | HTH-type transcriptional regulator CdhR | insig. | 35 | 32 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_19580 | | AraC family transcriptional regulator | insig. | 40 | 26 |
| | Variovorax sp. SCN45 | GFF5573 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 42 | 29 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02634 | | HTH-type transcriptional activator Btr | no data | 40 | 26 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS29205 | | transcriptional regulator | insig. | 38 | 29 |
| | Pectobacterium carotovorum WPP14 | HER17_RS13235 | | AraC family transcriptional regulator | insig. | 34 | 30 |
| | Pseudomonas simiae WCS417 | PS417_16110 | | AraC family transcriptional regulator | no data | 41 | 25 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03574 | | transcriptional regulator, AraC family with amidase-like domain | insig. | 40 | 25 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_00854 | | transcriptional regulator, AraC family | insig. | 23 | 85 |
| | Xanthobacter sp. DMC5 | GFF1541 | | HTH-type transcriptional activator RhaR | insig. | 42 | 25 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5037 | | Transcriptional regulator of various polyols utilization, AraC family | no data | 33 | 39 |
| | Paraburkholderia graminis OAS925 | ABIE53_004682 | | transcriptional regulator GlxA family with amidase domain | sig. | 40 | 25 |
| | Pseudomonas sp. DMC3 | GFF934 | | HTH-type transcriptional activator RhaR | no data | 40 | 29 |
| | Paraburkholderia graminis OAS925 | ABIE53_005199 | | AraC family transcriptional activator FtrA | insig. | 36 | 29 |
| | Rahnella sp. WP5 | EX31_RS06920 | | GlxA family transcriptional regulator | insig. | 33 | 34 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS34535 | | AraC family transcriptional regulator | insig. | 40 | 25 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS25940 | | AraC family transcriptional regulator | insig. | 40 | 25 |
| | Pseudomonas putida KT2440 | PP_2383 | | Transcriptional regulator, AraC family | sig. | 35 | 39 |
| | Rhizobium sp. OAE497 | ABIE40_RS13855 | | AraC family transcriptional regulator | insig. | 39 | 30 |
| | Serratia liquefaciens MT49 | IAI46_16680 | | GlxA family transcriptional regulator | cofit | 39 | 29 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3408 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 37 | 30 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_03582 | | response regulator receiver domain protein | cofit | 34 | 31 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS16970 | | GlxA family transcriptional regulator | insig. | 39 | 25 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS28635 | | AraC family transcriptional regulator | insig. | 38 | 29 |
| | Azospirillum brasilense Sp245 | AZOBR_RS26865 | | AraC family transcriptional regulator | insig. | 36 | 29 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5915 | | Transcriptional regulator, AraC family | no data | 35 | 28 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10510 | | AraC family transcriptional regulator | no data | 34 | 29 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_25455 | | transcriptional regulator | insig. | 34 | 29 |
| | Variovorax sp. SCN45 | GFF925 | | hypothetical protein | insig. | 39 | 27 |
| | Pseudomonas sp. BP01 | JOY50_RS03650 | | helix-turn-helix domain-containing protein | no data | 38 | 26 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_22260 | | AraC family transcriptional regulator | no data | 36 | 30 |
| | Pseudomonas sp. S08-1 | OH686_23095 | | Transcriptional regulator, AraC family | insig. | 36 | 29 |
| | Pseudomonas sp. SVBP6 | COO64_RS08160 | | GlxA family transcriptional regulator | insig. | 36 | 29 |
| | Variovorax sp. OAS795 | ABID97_RS26810 | | DJ-1/PfpI family protein | insig. | 36 | 29 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS38260 | | GlxA family transcriptional regulator | insig. | 34 | 29 |
| | Paraburkholderia graminis OAS925 | ABIE53_002581 | | transcriptional regulator GlxA family with amidase domain | insig. | 34 | 31 |
| | Paraburkholderia graminis OAS925 | ABIE53_002613 | | transcriptional regulator GlxA family with amidase domain | insig. | 38 | 29 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS22565 | | AraC family transcriptional regulator | insig. | 29 | 49 |
| | Klebsiella michiganensis M5al | BWI76_RS03785 | | AraC family transcriptional regulator | insig. | 29 | 33 |
| | Dinoroseobacter shibae DFL-12 | Dshi_2282 | | transcriptional regulator, AraC family (RefSeq) | insig. | 33 | 30 |
| | Pseudomonas putida KT2440 | PP_3439 | | Transcriptional regulator, AraC family | insig. | 40 | 28 |
| | Rhizobium sp. OAE497 | ABIE40_RS11210 | | GlxA family transcriptional regulator | insig. | 33 | 46 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS18080 | | helix-turn-helix transcriptional regulator | insig. | 35 | 29 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS18080 | | helix-turn-helix transcriptional regulator | insig. | 35 | 29 |
| | Sinorhizobium meliloti 1021 | SMa1822 | | hypothetical protein | insig. | 33 | 34 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS11030 | | GlxA family transcriptional regulator | insig. | 34 | 33 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_05559 | | HTH-type transcriptional regulator CdhR | cofit | 41 | 25 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS28745 | | GlxA family transcriptional regulator | insig. | 40 | 25 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS28745 | | GlxA family transcriptional regulator | insig. | 40 | 25 |
| | Pseudomonas sp. BP01 | JOY50_RS19745 | | AraC family transcriptional regulator | insig. | 38 | 29 |
| | Rhizobium sp. OAE497 | ABIE40_RS14485 | | transcriptional regulator FtrA | insig. | 38 | 25 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_19115 | | AraC family transcriptional regulator | insig. | 34 | 33 |
| | Pseudomonas sp. BP01 | JOY50_RS10660 | | AraC family transcriptional regulator | insig. | 33 | 39 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS25095 | | AraC family transcriptional regulator | insig. | 32 | 34 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS04690 | | AraC family transcriptional regulator | insig. | 31 | 30 |
| | Shewanella loihica PV-4 | Shew_2537 | | AraC family transcriptional regulator (RefSeq) | insig. | 29 | 41 |
| | Caulobacter crescentus NA1000 | CCNA_03054 | | AraC-family transcriptional regulator | cofit | 35 | 29 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03054 | | AraC-family transcriptional regulator | cofit | 35 | 29 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04931 | | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | cofit | 34 | 31 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS14425 | | AraC family transcriptional regulator | insig. | 33 | 33 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS14425 | | AraC family transcriptional regulator | sig. | 33 | 33 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3865 | | Transcriptional regulator, AraC family | insig. | 44 | 21 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2560 | | transcriptional regulator, AraC family (RefSeq) | insig. | 41 | 28 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS14665 | | transcriptional regulator FtrA | insig. | 40 | 25 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1673 | | transcriptional regulator, AraC family with amidase-like domain | insig. | 37 | 28 |
| | Paraburkholderia graminis OAS925 | ABIE53_002253 | | AraC family transcriptional regulator | insig. | 36 | 30 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03513 | | HTH-type transcriptional activator RhaS | cofit | 36 | 31 |
| | Pseudomonas sp. DMC3 | GFF1097 | | HTH-type transcriptional regulator CdhR | insig. | 35 | 29 |
| | Ralstonia solanacearum GMI1000 | RS_RS05455 | | GlxA family transcriptional regulator | sig. | 34 | 33 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02291 | | AraC-type DNA-binding protein | insig. | 32 | 38 |
| | Escherichia coli ECRC100 | OKFHMN_13890 | rhaS | HTH-type transcriptional activator RhaS | insig. | 31 | 35 |
| | Escherichia coli ECRC101 | MCAODC_04390 | rhaS | HTH-type transcriptional activator RhaS | insig. | 31 | 35 |