Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Shewanella amazonensis SB2B | Sama_1028 | | LysR family transcriptional regulator (RefSeq) | strong | 100 | 100 |
o | Shewanella sp. ANA-3 | Shewana3_1106 | | LysR family transcriptional regulator (RefSeq) | strong | 64 | 99 |
o | Shewanella oneidensis MR-1 | SO3460 | | transcriptional regulator, LysR family (NCBI ptt file) | strong | 64 | 99 |
o | Shewanella loihica PV-4 | Shew_3007 | | LysR family transcriptional regulator (RefSeq) | strong | 61 | 99 |
o | Vibrio cholerae E7946 ATCC 55056 | CSW01_05340 | | LysR family transcriptional regulator | cofit | 33 | 94 |
o | Ralstonia sp. UNC404CL21Col | ABZR87_RS20720 | | LysR family transcriptional regulator | insig. | 34 | 94 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS30065 | | LysR family transcriptional regulator | insig. | 33 | 93 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS10630 | | LysR family transcriptional regulator | insig. | 34 | 95 |
| Dechlorosoma suillum PS | Dsui_2090 | | transcriptional regulator | insig. | 32 | 94 |
| Shewanella amazonensis SB2B | Sama_3549 | | LyrR family transcriptional regulator (RefSeq) | insig. | 31 | 95 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00181 | | HTH-type transcriptional regulator DmlR | insig. | 32 | 94 |
| Escherichia coli ECRC101 | OKFHMN_16230 | yhjC | Uncharacterized HTH-type transcriptional regulator YhjC | insig. | 31 | 94 |
| Escherichia coli ECRC101 | MCAODC_06745 | yhjC | Uncharacterized HTH-type transcriptional regulator YhjC | insig. | 31 | 94 |
| Escherichia coli ECRC102 | NIAGMN_13995 | yhjC | Uncharacterized HTH-type transcriptional regulator YhjC | insig. | 31 | 94 |
| Escherichia coli ECRC98 | JDDGAC_19860 | yhjC | Uncharacterized HTH-type transcriptional regulator YhjC | no data | 31 | 94 |
| Escherichia coli ECRC99 | KEDOAH_11915 | yhjC | Uncharacterized HTH-type transcriptional regulator YhjC | no data | 31 | 94 |
| Sinorhizobium meliloti 1021 | SMc00831 | | transcriptional regulator | insig. | 33 | 92 |
| Escherichia coli ECOR38 | HEPCGN_15135 | yhjC | Uncharacterized HTH-type transcriptional regulator YhjC | cofit | 31 | 94 |
| Enterobacter sp. TBS_079 | MPMX20_04406 | | HTH-type transcriptional regulator PgrR | insig. | 32 | 94 |
| Escherichia coli BL21 | ECD_03369 | | LysR family putative transcriptional regulator | insig. | 31 | 94 |
| Escherichia coli BW25113 | b3521 | yhjC | predicted DNA-binding transcriptional regulator (RefSeq) | insig. | 31 | 94 |
| Escherichia coli ECRC62 | BNILDI_03360 | yhjC | Uncharacterized HTH-type transcriptional regulator YhjC | insig. | 31 | 94 |
| Enterobacter asburiae PDN3 | EX28DRAFT_4056 | | Transcriptional regulator | insig. | 32 | 94 |
| Variovorax sp. SCN45 | GFF7161 | | Transcriptional regulator, LysR family | insig. | 34 | 96 |
| Escherichia coli ECOR27 | NOLOHH_08195 | yhjC | Uncharacterized HTH-type transcriptional regulator YhjC | insig. | 31 | 94 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS09305 | | LysR family transcriptional regulator | insig. | 33 | 92 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS06390 | | LysR family transcriptional regulator | insig. | 32 | 94 |
| Escherichia fergusonii Becca | EFB2_00287 | | HTH-type transcriptional regulator DmlR | insig. | 31 | 94 |
| Escherichia coli Nissle 1917 | ECOLIN_RS20140 | | LysR family transcriptional regulator | insig. | 31 | 94 |
| Variovorax sp. SCN45 | GFF2326 | | Transcriptional regulator, LysR family | insig. | 33 | 96 |
| Pseudomonas fluorescens SBW25 | PFLU_RS14625 | | LysR family transcriptional regulator | insig. | 33 | 95 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS14625 | | LysR family transcriptional regulator | insig. | 33 | 95 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_10765 | | LysR family transcriptional regulator | insig. | 29 | 94 |
| Pseudomonas syringae pv. syringae B728a | Psyr_2357 | | transcriptional regulator, LysR family | insig. | 33 | 93 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2357 | | transcriptional regulator, LysR family | insig. | 33 | 93 |
| Enterobacter asburiae PDN3 | EX28DRAFT_1523 | | Transcriptional regulator | insig. | 31 | 94 |
| Klebsiella michiganensis M5al | BWI76_RS26725 | | LysR family transcriptional regulator | insig. | 31 | 94 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_03180 | | transcriptional regulator | insig. | 30 | 94 |
| Enterobacter sp. TBS_079 | MPMX20_01197 | | HTH-type transcriptional regulator PgrR | insig. | 31 | 98 |
| Rahnella sp. WP5 | EX31_RS05400 | | LysR family transcriptional regulator | insig. | 28 | 94 |
| Azospirillum sp. SherDot2 | MPMX19_04668 | | HTH-type transcriptional regulator DmlR | insig. | 32 | 95 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05865 | | transcriptional regulator, LysR family | insig. | 29 | 92 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_23240 | | LysR family transcriptional regulator | insig. | 33 | 91 |
| Sinorhizobium meliloti 1021 | SMa1602 | | LysR family transcriptional regulator | insig. | 34 | 93 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS13340 | | LysR family transcriptional regulator | insig. | 34 | 93 |
| Ralstonia solanacearum UW163 | UW163_RS00230 | | LysR family transcriptional regulator | insig. | 34 | 93 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05378 | | transcriptional regulator, LysR family | insig. | 31 | 91 |
| Pseudomonas fluorescens SBW25 | PFLU_RS07990 | | LysR family transcriptional regulator | insig. | 34 | 93 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS07990 | | LysR family transcriptional regulator | insig. | 34 | 93 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_25350 | | LysR family transcriptional regulator | insig. | 34 | 93 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS15410 | | LysR family transcriptional regulator | cofit | 34 | 93 |
| Pseudomonas putida KT2440 | PP_3811 | | Transcriptional regulator, LysR family | insig. | 32 | 94 |
| Rhodanobacter denitrificans MT42 | LRK55_RS07880 | | LysR family transcriptional regulator | cofit | 32 | 98 |
| Pectobacterium carotovorum WPP14 | HER17_RS19795 | | LysR family transcriptional regulator | insig. | 32 | 94 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF461 | | Transcriptional regulator, LysR family | insig. | 32 | 93 |
| Variovorax sp. SCN45 | GFF698 | | Transcriptional regulator, LysR family | insig. | 30 | 93 |
| Paraburkholderia graminis OAS925 | ABIE53_006193 | | DNA-binding transcriptional LysR family regulator | insig. | 29 | 92 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2979 | | Transcriptional regulator, LysR family | insig. | 32 | 94 |
| Paraburkholderia graminis OAS925 | ABIE53_006445 | | LysR family transcriptional regulator for bpeEF and oprC | insig. | 32 | 91 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4707.1 | | Transcriptional regulator, LysR family | insig. | 32 | 91 |
| Enterobacter sp. TBS_079 | MPMX20_00940 | | HTH-type transcriptional regulator DmlR | insig. | 32 | 93 |
| Burkholderia phytofirmans PsJN | BPHYT_RS10520 | | LysR family transcriptional regulator | no data | 32 | 92 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS19415 | | LysR family transcriptional regulator | insig. | 31 | 94 |
| Rhodanobacter denitrificans MT42 | LRK55_RS12490 | | LysR family transcriptional regulator | insig. | 31 | 91 |
| Klebsiella michiganensis M5al | BWI76_RS03325 | | LysR family transcriptional regulator | insig. | 28 | 92 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS08130 | | LysR family transcriptional regulator | insig. | 32 | 97 |
| Klebsiella michiganensis M5al | BWI76_RS12615 | | LysR family transcriptional regulator | insig. | 31 | 94 |
| Pseudomonas putida KT2440 | PP_2961 | | Transcriptional regulator, LysR family | insig. | 29 | 92 |
| Pseudomonas fluorescens SBW25 | PFLU_RS07950 | | LysR family transcriptional regulator | insig. | 33 | 92 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS07950 | | LysR family transcriptional regulator | insig. | 33 | 92 |
| Ralstonia solanacearum PSI07 | RPSI07_RS03455 | | LysR family transcriptional regulator | insig. | 33 | 93 |
| Castellaniella sp019104865 MT123 | ABCV34_RS01420 | | LysR family transcriptional regulator | insig. | 30 | 93 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS18220 | | LysR family transcriptional regulator | insig. | 33 | 94 |
| Pseudomonas putida KT2440 | PP_2502 | | Transcriptional regulator, LysR family | insig. | 32 | 93 |
| Rahnella sp. WP5 | EX31_RS07465 | | LysR family transcriptional regulator | insig. | 32 | 94 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_14945 | lysR | LysR family transcriptional regulator | insig. | 32 | 94 |
| Burkholderia phytofirmans PsJN | BPHYT_RS24465 | | LysR family transcriptional regulator | insig. | 31 | 91 |
| Pseudomonas simiae WCS417 | PS417_08020 | | LysR family transcriptional regulator | insig. | 34 | 93 |
| Pseudomonas sp. RS175 | PFR28_02001 | | HTH-type transcriptional regulator DmlR | insig. | 32 | 93 |
| Serratia liquefaciens MT49 | IAI46_16195 | | LysR family transcriptional regulator | insig. | 31 | 94 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_07805 | | LysR family transcriptional regulator | insig. | 31 | 93 |
| Pseudomonas sp. S08-1 | OH686_07425 | | LysR family transcriptional regulator, regulator for bpeEF and oprC | insig. | 30 | 94 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS19275 | | LysR family transcriptional regulator | insig. | 28 | 92 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.52.1 | | transcriptional regulator lysR family | insig. | 33 | 95 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF373 | | TcuR: regulates tcuABC genes used in utilization of tricarballylate | insig. | 32 | 94 |
| Lysobacter sp. OAE881 | ABIE51_RS01040 | | LysR family transcriptional regulator | insig. | 32 | 95 |
| Azospirillum sp. SherDot2 | MPMX19_06917 | | HTH-type transcriptional regulator PgrR | cofit | 31 | 93 |
| Rhodospirillum rubrum S1H | Rru_A1041 | | Transcriptional Regulator, LysR family (NCBI) | insig. | 31 | 94 |
| Ralstonia solanacearum GMI1000 | RS_RS19305 | | LysR family transcriptional regulator | insig. | 33 | 93 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS04035 | | LysR substrate-binding domain-containing protein | insig. | 32 | 94 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12790 | | LysR family transcriptional regulator | insig. | 31 | 91 |
| Ralstonia solanacearum GMI1000 | RS_RS22475 | | LysR family transcriptional regulator | strong | 31 | 93 |
| Variovorax sp. OAS795 | ABID97_RS19260 | | LysR family transcriptional regulator | insig. | 31 | 95 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS30490 | | LysR family transcriptional regulator | insig. | 30 | 93 |
| Pseudomonas sp. S08-1 | OH686_23140 | | Transcriptional regulator, LysR family | insig. | 31 | 92 |
| Shewanella loihica PV-4 | Shew_2292 | | LysR family transcriptional regulator (RefSeq) | insig. | 31 | 93 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_0141 | | transcriptional regulator, LysR family | insig. | 30 | 95 |
| Shewanella loihica PV-4 | Shew_3407 | | LysR family transcriptional regulator (RefSeq) | insig. | 31 | 94 |
| Variovorax sp. SCN45 | GFF3618 | | Transcriptional regulator, LysR family | cofit | 31 | 95 |
| Klebsiella michiganensis M5al | BWI76_RS27965 | | LysR family transcriptional regulator | insig. | 30 | 98 |