Homologs of Shew_2452 from Shewanella loihica PV-4

DEAD/DEAH box helicase domain-containing protein (RefSeq)
SEED: ATP-dependent RNA helicase VCA0061

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_2452 DEAD/DEAH box helicase domain-containing protein (RefSeq) no data 100 100
o Shewanella oneidensis MR-1 SO2838 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 77 97
o Shewanella sp. ANA-3 Shewana3_2606 DEAD/DEAH box helicase domain-containing protein (RefSeq) no data 77 97
o Shewanella amazonensis SB2B Sama_1273 DEAD/DEAH box helicase-like protein (RefSeq) no data 72 97
o Vibrio cholerae E7946 ATCC 55056 CSW01_14335 ATP-dependent helicase insig. 57 97
o Alteromonas macleodii MIT1002 MIT1002_01999 ATP-dependent RNA helicase SrmB no data 49 96
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14000 ATP-dependent helicase insig. 43 83
  Ralstonia solanacearum UW163 UW163_RS15810 ATP-dependent helicase insig. 43 83
  Ralstonia sp. UNC404CL21Col ABZR87_RS09700 DEAD/DEAH box helicase strong 42 82
  Serratia liquefaciens MT49 IAI46_19600 ATP-dependent RNA helicase SrmB strong 42 96
  Ralstonia solanacearum GMI1000 RS_RS04735 RNA helicase insig. 42 82
  Cupriavidus basilensis FW507-4G11 RR42_RS14720 RNA helicase no data 42 85
  Ralstonia solanacearum PSI07 RPSI07_RS19465 ATP-dependent helicase insig. 42 82
  Burkholderia phytofirmans PsJN BPHYT_RS12280 RNA helicase insig. 42 85
  Paraburkholderia sabiae LMG 24235 QEN71_RS06275 DEAD/DEAH box helicase insig. 41 83
o Pseudomonas sp. S08-1 OH686_05415 ATP-dependent RNA helicase SrmB cofit 44 83
o Pseudomonas stutzeri RCH2 Psest_1627 Superfamily II DNA and RNA helicases strong 43 83
  Shewanella amazonensis SB2B Sama_2742 ATP-dependent RNA helicase SrmB (RefSeq) cofit 43 83
o Pseudomonas putida KT2440 PP_4532 ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis strong 41 95
o Pseudomonas sp. RS175 PFR28_00756 ATP-dependent RNA helicase RhlE insig. 42 83
  Paraburkholderia graminis OAS925 ABIE53_002535 superfamily II DNA/RNA helicase strong 41 84
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00581 Superfamily II DNA and RNA helicase no data 41 84
o Pseudomonas sp. BP01 JOY50_RS01230 DEAD/DEAH box helicase insig. 40 95
o Kangiella aquimarina DSM 16071 B158DRAFT_1312 Superfamily II DNA and RNA helicases insig. 38 93
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4451 ATP-dependent RNA helicase SrmB strong 40 95
o Pseudomonas fluorescens FW300-N2E3 AO353_18305 RNA helicase sig. 42 83
o Pseudomonas sp. DMC3 GFF2355 ATP-dependent RNA helicase RhlE no data 41 90
  Herbaspirillum seropedicae SmR1 HSERO_RS17155 RNA helicase insig. 39 83
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2675 ATP-dependent RNA helicase SrmB insig. 42 83
  Methylophilus sp. DMC18 GFF1281 ATP-dependent RNA helicase RhlE cofit 41 88
o Pseudomonas simiae WCS417 PS417_20275 RNA helicase no data 40 95
o Pseudomonas fluorescens FW300-N2C3 AO356_04210 RNA helicase no data 42 83
o Pseudomonas aeruginosa PA14 IKLFDK_17790 RNA helicase insig. 43 83
  Erwinia amylovora T8 OLJFJH_10200 ATP-dependent RNA helicase SrmB strong 40 92
o Pseudomonas fluorescens SBW25 PFLU_RS22195 DEAD/DEAH box helicase strong 42 83
o Pseudomonas fluorescens SBW25-INTG PFLU_RS22195 DEAD/DEAH box helicase strong 42 83
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_543 ATP-dependent RNA helicase SrmB no data 42 83
o Pseudomonas sp. SVBP6 COO64_RS21930 DEAD/DEAH box helicase insig. 39 95
  Pantoea sp. MT58 IAI47_04835 ATP-dependent RNA helicase SrmB strong 41 92
  Castellaniella sp019104865 MT123 ABCV34_RS13580 DEAD/DEAH box helicase insig. 40 90
  Rahnella sp. WP5 EX31_RS21785 ATP-dependent RNA helicase SrmB cofit 39 92
o Pseudomonas syringae pv. syringae B728a Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal sig. 41 83
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 41 83
  Lysobacter sp. OAE881 ABIE51_RS06650 DEAD/DEAH box helicase insig. 39 89
  Pectobacterium carotovorum WPP14 HER17_RS05765 ATP-dependent RNA helicase SrmB cofit 40 87
  Erwinia tracheiphila SCR3 LU632_RS15440 srmB ATP-dependent RNA helicase SrmB cofit 41 90
  Shewanella loihica PV-4 Shew_0767 ATP-dependent RNA helicase SrmB (RefSeq) strong 41 87
  Shewanella oneidensis MR-1 SO0947 srmB ATP-dependent RNA helicase SrmB (NCBI ptt file) strong 41 83
  Azospirillum sp. SherDot2 MPMX19_06125 RNA helicase CrhR insig. 40 82
  Shewanella sp. ANA-3 Shewana3_3336 ATP-dependent RNA helicase SrmB (RefSeq) strong 41 83
  Dickeya dadantii 3937 DDA3937_RS15780 ATP-dependent RNA helicase SrmB strong 41 83
  Alteromonas macleodii MIT1002 MIT1002_00941 ATP-dependent RNA helicase SrmB no data 42 83
  Acinetobacter radioresistens SK82 MPMX26_02742 ATP-dependent RNA helicase DeaD cofit 42 82
  Pseudomonas sp. SVBP6 COO64_RS15390 DEAD/DEAH box helicase insig. 42 83
  Enterobacter sp. TBS_079 MPMX20_03447 ATP-dependent RNA helicase SrmB strong 41 89
  Azospirillum sp. SherDot2 MPMX19_02011 RNA helicase CrhR strong 38 91
  Klebsiella michiganensis M5al BWI76_RS21370 ATP-dependent RNA helicase SrmB insig. 40 88
  Enterobacter asburiae PDN3 EX28DRAFT_0069 Superfamily II DNA and RNA helicases insig. 41 87
  Paraburkholderia graminis OAS925 ABIE53_001438 ATP-dependent RNA helicase RhlE strong 40 81
  Dickeya dianthicola ME23 DZA65_RS16945 ATP-dependent RNA helicase SrmB cofit 41 83
  Vibrio cholerae E7946 ATCC 55056 CSW01_03475 ATP-dependent RNA helicase SrmB cofit 41 82
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00308 Superfamily II DNA and RNA helicase strong 40 82
  Dickeya dianthicola 67-19 HGI48_RS15865 ATP-dependent RNA helicase SrmB cofit 41 83
  Burkholderia phytofirmans PsJN BPHYT_RS06155 DEAD/DEAH box helicase strong 37 91
  Cupriavidus basilensis FW507-4G11 RR42_RS14810 DEAD/DEAH box helicase insig. 37 92
  Dechlorosoma suillum PS Dsui_3174 DNA/RNA helicase, superfamily II insig. 40 83
  Pseudomonas fluorescens FW300-N2E3 AO353_06265 DEAD/DEAH box helicase strong 40 83
  Pseudomonas sp. DMC3 GFF3924 ATP-dependent RNA helicase RhlE cofit 41 83
  Herbaspirillum seropedicae SmR1 HSERO_RS17855 DEAD/DEAH box helicase sig. 40 83
  Castellaniella sp019104865 MT123 ABCV34_RS12515 DEAD/DEAH box helicase cofit 39 83
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2736 ATP-dependent RNA helicase PA3950 sig. 40 83
  Ralstonia sp. UNC404CL21Col ABZR87_RS15540 DEAD/DEAH box helicase sig. 39 83
  Marinobacter adhaerens HP15 HP15_3607 DEAD/DEAH box helicase domain protein insig. 39 82
  Methylophilus sp. DMC18 GFF1280 ATP-dependent RNA helicase RhlE insig. 37 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5046 ATP-dependent RNA helicase PA3950 strong 43 78
  Ralstonia solanacearum GMI1000 RS_RS02695 RNA helicase sig. 36 92
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1409 ATP-dependent RNA helicase PA3950 insig. 43 78
  Pseudomonas sp. RS175 PFR28_03825 ATP-dependent RNA helicase RhlE insig. 43 78
  Kangiella aquimarina DSM 16071 B158DRAFT_0320 Superfamily II DNA and RNA helicases insig. 41 80
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2104 ATP-dependent RNA helicase SrmB insig. 40 85
  Ralstonia solanacearum PSI07 RPSI07_RS13580 ATP-dependent helicase sig. 40 83
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4527.1 ATP-dependent RNA helicase RhlE strong 36 92
  Pseudomonas fluorescens FW300-N2C3 AO356_15530 DEAD/DEAH box helicase sig. 43 78
  Paraburkholderia graminis OAS925 ABIE53_003462 ATP-dependent RNA helicase RhlE sig. 41 80
  Paraburkholderia sabiae LMG 24235 QEN71_RS24485 DEAD/DEAH box helicase insig. 40 82
  Pseudomonas sp. BP01 JOY50_RS21825 DEAD/DEAH box helicase insig. 39 83
  Vibrio cholerae E7946 ATCC 55056 CSW01_18020 DEAD/DEAH box helicase cofit 39 89
  Escherichia coli ECRC62 BNILDI_11835 srmB ATP-dependent RNA helicase SrmB cofit 40 88
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03650 ATP-dependent helicase insig. 39 83
  Ralstonia solanacearum UW163 UW163_RS10020 ATP-dependent helicase insig. 39 83
  Ralstonia solanacearum PSI07 RPSI07_RS21325 RNA helicase sig. 36 92
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04222 ATP-dependent RNA helicase RhlE sig. 41 80
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1841.1 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) insig. 40 82
  Ralstonia sp. UNC404CL21Col ABZR87_RS07850 DEAD/DEAH box helicase sig. 39 82
  Pseudomonas sp. BP01 JOY50_RS09795 DEAD/DEAH box helicase insig. 36 89
  Pseudomonas sp. SVBP6 COO64_RS17470 DEAD/DEAH box helicase insig. 36 93
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11875 RNA helicase strong 39 82
  Ralstonia solanacearum UW163 UW163_RS01715 RNA helicase insig. 39 82
  Pseudomonas putida KT2440 PP_4766 ATP-dependent RNA helicase strong 39 83
  Ralstonia solanacearum GMI1000 RS_RS11095 ATP-dependent helicase sig. 39 83