Homologs of Shew_0645 from Shewanella loihica PV-4

type II and III secretion system protein (RefSeq)
SEED: General secretion pathway protein D
KEGG: pilus assembly protein CpaC

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_0645 type II and III secretion system protein (RefSeq) insig. 100 100
o Shewanella amazonensis SB2B Sama_0707 putative type II and III secretion system outermembrane protein, secretin (RefSeq) insig. 68 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS17485 pilus assembly protein N-terminal domain-containing protein insig. 33 93
  Burkholderia phytofirmans PsJN BPHYT_RS34035 type II and III secretion system outermembrane protein, secretin insig. 32 94
  Castellaniella sp019104865 MT123 ABCV34_RS04370 pilus assembly protein N-terminal domain-containing protein insig. 29 92
o Pseudomonas sp. S08-1 OH686_19895 hypothetical protein insig. 29 92
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4123 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly insig. 32 88
  Castellaniella sp019104865 MT123 ABCV34_RS08125 type II and III secretion system protein family protein insig. 29 89
o Sinorhizobium meliloti 1021 SMa0163 PilQ2 pilus assembly protein insig. 30 92
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3243 Flp pilus assembly protein, secretin CpaC insig. 31 84
o Cupriavidus basilensis FW507-4G11 RR42_RS35995 membrane protein insig. 30 91
o Variovorax sp. SCN45 GFF2210 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly insig. 31 88
o Ralstonia solanacearum GMI1000 RS_RS22365 membrane protein insig. 30 85
  Burkholderia phytofirmans PsJN BPHYT_RS08175 membrane protein no data 31 87
o Ralstonia solanacearum PSI07 RPSI07_RS05055 membrane protein insig. 29 85
o Variovorax sp. OAS795 ABID97_RS24280 type II and III secretion system protein family protein insig. 31 85
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS18500 membrane protein insig. 29 85
o Ralstonia solanacearum UW163 UW163_RS20630 membrane protein insig. 29 85
  Pseudomonas syringae pv. syringae B728a Psyr_4391 type II and III secretion system protein insig. 31 85
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4391 type II and III secretion system protein insig. 31 85
o Desulfovibrio vulgaris Miyazaki F DvMF_2741 type II and III secretion system protein (RefSeq) insig. 29 83
  Desulfovibrio vulgaris Hildenborough JW710 DVU2119 cpaC type II/III secretion system protein (TIGR) insig. 29 84
o Ralstonia sp. UNC404CL21Col ABZR87_RS19535 type II and III secretion system protein family protein strong 28 85
  Dinoroseobacter shibae DFL-12 Dshi_1129 type II and III secretion system protein (RefSeq) insig. 29 83
  Rhodopseudomonas palustris CGA009 TX73_019060 type II and III secretion system protein family protein strong 30 89
o Pseudomonas fluorescens FW300-N2E3 AO353_01545 secretin insig. 30 92
o Pseudomonas simiae WCS417 PS417_03105 secretin sig. 29 91
o Paraburkholderia graminis OAS925 ABIE53_002440 pilus assembly protein CpaC sig. 42 38
o Pseudomonas fluorescens SBW25 PFLU_RS03185 type II and III secretion system protein family protein insig. 29 91
o Pseudomonas fluorescens SBW25-INTG PFLU_RS03185 type II and III secretion system protein family protein sig. 29 91
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_491 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly insig. 31 88
  Pseudomonas sp. SVBP6 COO64_RS23405 type II and III secretion system protein family protein insig. 29 84
  Caulobacter crescentus NA1000 CCNA_03040 outer membrane pilus secretion channel CpaC cofit 27 88
  Caulobacter crescentus NA1000 Δfur CCNA_03040 outer membrane pilus secretion channel CpaC cofit 27 88
  Pseudomonas sp. DMC3 GFF3343 Type 3 secretion system secretin cofit 45 37
  Pseudomonas aeruginosa PA14 IKLFDK_02590 type 4b pilus Flp secretin RcpA insig. 44 37
  Pseudomonas sp. S08-1 OH686_02550 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly insig. 27 93
  Marinobacter adhaerens HP15 HP15_p187g7 type II and III secretion system protein strong 29 72
  Pseudomonas fluorescens FW300-N2C3 AO356_20010 secretin insig. 45 37
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5920 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly insig. 45 37
  Magnetospirillum magneticum AMB-1 AMB_RS18935 Flp pilus assembly protein, secretin CpaC cofit 26 90
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2075 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly insig. 43 37
  Pseudomonas sp. RS175 PFR28_03039 Type 3 secretion system secretin insig. 44 37
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS12020 type II and III secretion system protein family protein cofit 28 89
  Phaeobacter inhibens DSM 17395 PGA1_c06140 putative bacterial type II/III secretion system protein sig. 26 83
o Pseudomonas stutzeri RCH2 Psest_2625 Flp pilus assembly protein, secretin CpaC insig. 37 36
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06365 pilus assembly protein CpaC insig. 25 87
  Pectobacterium carotovorum WPP14 HER17_RS17720 type II and III secretion system protein family protein insig. 30 56
  Pseudomonas sp. S08-1 OH686_10025 Type IV pilus biogenesis protein PilQ cofit 27 56
  Variovorax sp. OAS795 ABID97_RS09065 type II and III secretion system protein family protein insig. 29 59
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3756 Type IV pilus biogenesis protein PilQ insig. 28 56
  Pseudomonas syringae pv. syringae B728a Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein insig. 28 56
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein insig. 28 56
  Cupriavidus basilensis FW507-4G11 RR42_RS04130 secretin insig. 26 84
  Pseudomonas fluorescens FW300-N2E3 AO353_12495 fimbrial protein insig. 29 56
  Marinobacter adhaerens HP15 HP15_478 type 4 fimbrial biogenesis protein PilQ sig. 29 56
  Paraburkholderia graminis OAS925 ABIE53_005001 pilus assembly protein CpaC insig. 25 88
  Pseudomonas sp. RS175 PFR28_05011 Type 3 secretion system secretin insig. 28 56
  Pseudomonas sp. SVBP6 COO64_RS13065 type IV pilus secretin PilQ insig. 27 56
  Methylophilus sp. DMC18 GFF1858 Type 3 secretion system secretin insig. 27 56
  Pseudomonas sp. BP01 JOY50_RS09295 type IV pilus secretin PilQ insig. 26 56
  Pseudomonas fluorescens GW456-L13 PfGW456L13_277 Type IV pilus biogenesis protein PilQ insig. 27 56
  Paraburkholderia sabiae LMG 24235 QEN71_RS10660 type II and III secretion system protein family protein insig. 37 35
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF71 Predicted secretion system X protein GspD-like insig. 31 56
o Bosea sp. OAE506 ABIE41_RS03700 type II and III secretion system protein family protein insig. 24 92
  Ralstonia solanacearum GMI1000 RS_RS03295 secretin insig. 34 37
  Pseudomonas putida KT2440 PP_5080 type 4 pili biogenesis protein insig. 25 56
  Pseudomonas sp. DMC3 GFF3098 Type IV pilus biogenesis and competence protein PilQ cofit 27 56
  Alteromonas macleodii MIT1002 MIT1002_03976 Pullulanase secretion envelope PulD strong 35 39
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1539 Type IV pilus biogenesis protein PilQ insig. 28 56
  Ralstonia solanacearum PSI07 RPSI07_RS20745 secretin insig. 31 40
  Pseudomonas aeruginosa PA14 IKLFDK_28330 type 4a pilus secretin PilQ strong 27 56
  Shewanella sp. ANA-3 Shewana3_0151 general secretion pathway protein D (RefSeq) strong 32 43
  Shewanella oneidensis MR-1 SO0166 gspD general secretion pathway protein D (NCBI ptt file) strong 32 43
  Escherichia coli ECRC100 OKFHMN_00285 etpD variant type II secretion system secretin EtpD insig. 29 61
  Escherichia coli ECRC101 MCAODC_15265 etpD variant type II secretion system secretin EtpD insig. 29 61
  Escherichia coli ECRC102 NIAGMN_28605 etpD variant type II secretion system secretin EtpD insig. 29 61
  Escherichia coli ECRC98 JDDGAC_30295 etpD variant type II secretion system secretin EtpD cofit 29 61
  Ralstonia sp. UNC404CL21Col ABZR87_RS08515 type II and III secretion system protein family protein insig. 34 36
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12525 secretin insig. 33 37
  Ralstonia solanacearum UW163 UW163_RS01040 secretin insig. 33 37
  Dickeya dadantii 3937 DDA3937_RS14800 type II secretion system secretin GspD cofit 28 75
  Pseudomonas fluorescens FW300-N2C3 AO356_09395 fimbrial protein insig. 31 37
  Dickeya dianthicola 67-19 HGI48_RS15450 type II secretion system secretin GspD insig. 29 54
  Dickeya dianthicola ME23 DZA65_RS16270 type II secretion system secretin GspD insig. 28 59
  Sinorhizobium meliloti 1021 SMc04111 pilus assembly transmembrane protein insig. 33 44
  Rahnella sp. WP5 EX31_RS16165 type II secretion system secretin GspD insig. 29 67
  Dickeya dianthicola 67-19 HGI48_RS14735 type II secretion system secretin GspD insig. 28 72
  Dickeya dianthicola ME23 DZA65_RS15680 type II secretion system secretin GspD cofit 28 72
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00312 Type IV pilus biogenesis and competence protein PilQ insig. 28 56
  Shewanella loihica PV-4 Shew_3619 general secretion pathway protein D (RefSeq) strong 32 43
  Escherichia coli Nissle 1917 ECOLIN_RS19370 DNA uptake porin HofQ insig. 28 56
  Shewanella amazonensis SB2B Sama_0169 type II and III secretion system protein (RefSeq) strong 31 43
  Pseudomonas stutzeri RCH2 Psest_3715 type IV pilus secretin (or competence protein) PilQ strong 31 37
  Escherichia coli BL21 ECD_03243 DNA catabolic putative fimbrial transporter cofit 28 56
  Escherichia coli BW25113 b3391 hofQ predicted fimbrial transporter (NCBI) strong 28 56
  Escherichia coli ECOR27 NOLOHH_08895 hofQ DNA uptake porin HofQ insig. 28 56
  Escherichia coli ECOR38 HEPCGN_15925 hofQ DNA uptake porin HofQ insig. 28 56
  Escherichia coli ECRC100 OKFHMN_17105 hofQ DNA uptake porin HofQ cofit 28 56
  Escherichia coli ECRC101 MCAODC_07635 hofQ DNA uptake porin HofQ insig. 28 56