Homologs of Dshi_0533 from Dinoroseobacter shibae DFL-12

Xylose isomerase domain protein TIM barrel (RefSeq)
SEED: D-tagatose 3-epimerase (EC 5.3.1.-)

154 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dinoroseobacter shibae DFL-12 Dshi_0533 Xylose isomerase domain protein TIM barrel (RefSeq) sig. 100 100
o Sinorhizobium meliloti 1021 SM_b20488 hypothetical protein insig. 70 100
o Agrobacterium fabrum C58 Atu4748 D-tagatose 3-epimerase insig. 60 99
o Synechocystis sp000284455 PCC 6803 SGL_RS07390 sugar phosphate isomerase/epimerase family protein insig. 32 96
  Azospirillum brasilense Sp245 AZOBR_RS04660 hypothetical protein insig. 32 100
  Sinorhizobium meliloti 1021 SMa1354 Isomerase insig. 30 96
  Rhizobium sp. OAE497 ABIE40_RS25020 sugar phosphate isomerase/epimerase family protein strong 27 89
  Agrobacterium fabrum C58 Atu4750 D-psicose 3-epimerase insig. 28 95
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15475 sugar phosphate isomerase/epimerase insig. 33 73
  Ralstonia solanacearum UW163 UW163_RS12935 sugar phosphate isomerase/epimerase insig. 33 73
  Ralstonia solanacearum PSI07 RPSI07_RS17880 sugar phosphate isomerase/epimerase insig. 33 73
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12255 epimerase insig. 28 77
  Sinorhizobium meliloti 1021 SMa1353 epimerase insig. 27 77
  Escherichia coli ECRC100 OKFHMN_02350 ycjR 3-dehydro-D-guloside 4-epimerase insig. 36 42
  Escherichia coli ECRC101 MCAODC_15920 ycjR 3-dehydro-D-guloside 4-epimerase insig. 36 42
  Escherichia coli ECRC102 NIAGMN_26520 ycjR 3-dehydro-D-guloside 4-epimerase insig. 36 42
  Escherichia coli ECRC99 KEDOAH_26425 ycjR 3-dehydro-D-guloside 4-epimerase no data 36 42
  Escherichia coli ECOR38 HEPCGN_25840 ycjR 3-dehydro-D-guloside 4-epimerase insig. 35 42
  Escherichia coli Nissle 1917 ECOLIN_RS07900 sugar phosphate isomerase/epimerase no data 35 42
  Escherichia coli BL21 ECD_01291 putative TIM alpha/beta barrel enzyme insig. 35 42
  Escherichia fergusonii Becca EFB2_02613 Inosose dehydratase insig. 35 42
  Escherichia coli ECOR27 NOLOHH_20045 ycjR 3-dehydro-D-guloside 4-epimerase insig. 35 42
  Escherichia coli ECRC62 BNILDI_18195 ycjR 3-dehydro-D-guloside 4-epimerase insig. 35 42
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02368 Inosose dehydratase insig. 35 42
  Escherichia coli BW25113 b1314 b1314 putative transient receptor potential locus (VIMSS) insig. 35 42
  Escherichia coli ECRC98 JDDGAC_04895 ycjR 3-dehydro-D-guloside 4-epimerase insig. 35 42
  Rahnella sp. WP5 EX31_RS12720 sugar phosphate isomerase/epimerase insig. 29 59
  Enterobacter asburiae PDN3 EX28DRAFT_0985 Sugar phosphate isomerases/epimerases insig. 35 34
  Sinorhizobium meliloti 1021 SM_b20680 hydroxypyruvate isomerase insig. 30 80
  Enterobacter sp. TBS_079 MPMX20_02463 5-keto-L-gluconate epimerase insig. 29 59
  Pseudomonas fluorescens FW300-N2E3 AO353_01925 hydroxypyruvate isomerase sig. 25 84
  Rahnella sp. WP5 EX31_RS04585 hydroxypyruvate isomerase insig. 31 41
  Azospirillum brasilense Sp245 AZOBR_RS07960 hydroxypyruvate isomerase insig. 30 54
  Pseudomonas sp. BP01 JOY50_RS00355 hyi hydroxypyruvate isomerase insig. 26 84
  Pseudomonas putida KT2440 PP_4298 hydroxypyruvate isomerase insig. 26 84
  Pseudomonas fluorescens SBW25 PFLU_RS08865 hydroxypyruvate isomerase insig. 25 84
  Pseudomonas fluorescens SBW25-INTG PFLU_RS08865 hydroxypyruvate isomerase strong 25 84
  Pseudomonas sp. DMC3 GFF2502 Hydroxypyruvate isomerase cofit 25 84
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01892 Hydroxypyruvate isomerase cofit 26 84
  Pseudomonas sp. FW215-L2 GFF3607 Hydroxypyruvate isomerase strong 25 84
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4424 Hydroxypyruvate isomerase (EC 5.3.1.22) insig. 30 45
  Paraburkholderia graminis OAS925 ABIE53_001999 hydroxypyruvate isomerase strong 29 41
  Rhizobium sp. OAE497 ABIE40_RS25205 hydroxypyruvate isomerase insig. 27 80
  Pseudomonas sp. SVBP6 COO64_RS25880 hyi hydroxypyruvate isomerase insig. 26 84
  Pseudomonas orientalis W4I3 QF045_RS11505 hydroxypyruvate isomerase insig. 25 84
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4296 Hydroxypyruvate isomerase (EC 5.3.1.22) insig. 25 84
  Ralstonia solanacearum PSI07 RPSI07_RS08645 hydroxypyruvate isomerase insig. 30 51
  Variovorax sp. SCN45 GFF1799 Hydroxypyruvate isomerase (EC 5.3.1.22) insig. 26 77
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3660 Hydroxypyruvate isomerase (EC 5.3.1.22) insig. 25 84
  Pseudomonas protegens RBAN4 FABNJH_08825 hyi hydroxypyruvate isomerase insig. 25 84
  Pseudomonas fluorescens FW300-N2C3 AO356_19615 hydroxypyruvate isomerase strong 26 84
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5838 Hydroxypyruvate isomerase (EC 5.3.1.22) sig. 26 84
  Pseudomonas simiae WCS417 PS417_08805 hydroxypyruvate isomerase strong 25 84
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00786 hydroxypyruvate isomerase strong 29 41
  Ralstonia solanacearum GMI1000 RS_RS16445 hydroxypyruvate isomerase insig. 30 48
  Variovorax sp. SCN45 GFF6587 Hydroxypyruvate isomerase (EC 5.3.1.22) insig. 27 73
  Paraburkholderia sabiae LMG 24235 QEN71_RS22540 hydroxypyruvate isomerase insig. 29 48
  Pseudomonas aeruginosa MRSN321 PFGADD_03725 hyi hydroxypyruvate isomerase sig. 26 84
  Pseudomonas aeruginosa PA14 IKLFDK_07150 hydroxypyruvate isomerase sig. 26 84
  Pseudomonas aeruginosa PUPa3 NPBIFN_03766 hyi hydroxypyruvate isomerase sig. 26 84
  Xanthobacter sp. DMC5 GFF1956 Hydroxypyruvate isomerase insig. 28 44
  Variovorax sp. OAS795 ABID97_RS22325 hydroxypyruvate isomerase sig. 25 79
  Klebsiella michiganensis M5al BWI76_RS06995 hydroxypyruvate isomerase insig. 28 45
  Ralstonia sp. UNC404CL21Col ABZR87_RS03890 hydroxypyruvate isomerase insig. 28 56
  Erwinia amylovora T8 OLJFJH_17285 HPr family phosphocarrier protein insig. 30 44
  Collimonas humicola GW821-FHT01A05 MPMX01_04033 Hydroxypyruvate isomerase strong 28 56
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3960 putative sugar phosphate isomerase/epimerase no data 27 54
  Burkholderia phytofirmans PsJN BPHYT_RS08830 hydroxypyruvate isomerase insig. 28 41
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF138 Hydroxypyruvate isomerase (EC 5.3.1.22) strong 25 54
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS08580 hydroxypyruvate isomerase insig. 29 57
  Ralstonia solanacearum UW163 UW163_RS05030 hydroxypyruvate isomerase insig. 29 57
  Pseudomonas segetis P6 ACVTMO_RS09410 hyi hydroxypyruvate isomerase insig. 28 40
  Acidovorax sp. GW101-3H11 Ac3H11_1087 Hydroxypyruvate isomerase (EC 5.3.1.22) insig. 25 81
  Azospirillum sp. SherDot2 MPMX19_05812 Hydroxypyruvate isomerase insig. 30 34
  Pseudomonas sp. RS175 PFR28_03111 Hydroxypyruvate isomerase strong 24 93
  Escherichia fergusonii Becca EFB2_03553 Hydroxypyruvate isomerase insig. 26 45
  Escherichia coli Nissle 1917 ECOLIN_RS02960 hydroxypyruvate isomerase insig. 26 45
  Pseudomonas sp. S08-1 OH686_20930 Hydroxypyruvate isomerase cofit 29 40
  Pseudomonas stutzeri RCH2 Psest_1180 hydroxypyruvate isomerase strong 26 73
  Escherichia coli ECRC100 OKFHMN_07920 hyi hydroxypyruvate isomerase insig. 26 45
  Escherichia coli ECRC101 MCAODC_27135 hyi hydroxypyruvate isomerase insig. 26 45
  Escherichia coli ECRC102 NIAGMN_05970 hyi hydroxypyruvate isomerase insig. 26 45
  Escherichia coli ECRC98 JDDGAC_11565 hyi hydroxypyruvate isomerase no data 26 45
  Escherichia coli ECRC99 KEDOAH_20050 hyi hydroxypyruvate isomerase no data 26 45
  Castellaniella sp019104865 MT123 ABCV34_RS12135 hydroxypyruvate isomerase insig. 31 40
  Escherichia coli BL21 ECD_00458 hydroxypyruvate isomerase no data 26 45
  Escherichia coli ECOR27 NOLOHH_00900 hyi hydroxypyruvate isomerase insig. 26 45
  Escherichia coli ECRC62 BNILDI_22330 hyi hydroxypyruvate isomerase cofit 26 45
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03172 Hydroxypyruvate isomerase insig. 26 45
  Escherichia coli BW25113 b0508 hyi hydroxypyruvate isomerase (NCBI) strong 26 45
  Pseudomonas segetis P6 ACVTMO_RS16305 hydroxypyruvate isomerase family protein insig. 26 76
  Pseudomonas syringae pv. syringae B728a Psyr_0462 Hydroxypyruvate isomerase insig. 27 46
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0462 Hydroxypyruvate isomerase insig. 27 46
  Escherichia coli ECOR38 HEPCGN_06555 hyi hydroxypyruvate isomerase sig. 25 45
  Sinorhizobium meliloti 1021 SMa1394 hypothetical protein insig. 29 58
  Escherichia coli BW25113 b2739 ygbM hypothetical protein (NCBI) insig. 23 80
  Cupriavidus basilensis FW507-4G11 RR42_RS19855 hydroxypyruvate isomerase strong 27 40
  Escherichia coli Nissle 1917 ECOLIN_RS15305 HPr family phosphocarrier protein insig. 25 55
  Dinoroseobacter shibae DFL-12 Dshi_1554 Hydroxypyruvate isomerase (RefSeq) insig. 27 79
  Azospirillum brasilense Sp245 AZOBR_RS23615 hydroxypyruvate isomerase insig. 27 49
  Azospirillum brasilense Sp245 AZOBR_RS11730 conserved protein of unknown function [Xylose isomerase-type TIM barrel domain] insig. 29 55
  Variovorax sp. OAS795 ABID97_RS11715 TIM barrel protein insig. 27 42
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15380 3-keto-beta-glycoside 1,2-lyase (from data) strong 30 41
  Alteromonas macleodii MIT1002 MIT1002_00367 Hydroxypyruvate isomerase insig. 29 42
  Escherichia coli BL21 ECD_02589 putative hydroxypyruvate isomerase insig. 25 55
  Escherichia fergusonii Becca EFB2_01173 2-oxo-tetronate isomerase insig. 25 55
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00994 2-oxo-tetronate isomerase insig. 25 55
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4502 Sugar phosphate isomerases/epimerases insig. 25 41
  Marinobacter adhaerens HP15 HP15_3485 hydroxypyruvate isomerase insig. 26 54
  Ralstonia solanacearum PSI07 RPSI07_RS23855 hydroxypyruvate isomerase insig. 25 84
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS07540 HPr family phosphocarrier protein cofit 28 42
  Escherichia coli ECOR27 NOLOHH_12340 otnI HPr family phosphocarrier protein insig. 25 55
  Escherichia coli ECRC62 BNILDI_10890 otnI HPr family phosphocarrier protein cofit 25 55
  Ralstonia sp. UNC404CL21Col ABZR87_RS05265 2-oxo-tetronate isomerase insig. 25 84
  Burkholderia phytofirmans PsJN BPHYT_RS31735 hydroxypyruvate isomerase no data 24 62
  Rhizobium sp. OAE497 ABIE40_RS17215 TIM barrel protein insig. 23 81
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4779 Hydroxypyruvate isomerase (EC 5.3.1.22) insig. 29 42
  Pseudomonas fluorescens SBW25 PFLU_RS11705 TIM barrel protein insig. 28 43
  Pseudomonas fluorescens SBW25-INTG PFLU_RS11705 TIM barrel protein insig. 28 43
  Herbaspirillum seropedicae SmR1 HSERO_RS21140 hydroxypyruvate isomerase insig. 27 65
  Pantoea sp. MT58 IAI47_07155 HPr family phosphocarrier protein insig. 26 49
  Rhizobium sp. OAE497 ABIE40_RS00070 sugar phosphate isomerase/epimerase family protein insig. 28 55
  Paraburkholderia sabiae LMG 24235 QEN71_RS17930 hydroxypyruvate isomerase family protein insig. 26 46
  Cellulophaga baltica 18 M666_RS10385 TIM barrel protein insig. 24 42
  Pseudomonas simiae WCS417 PS417_11075 hydroxypyruvate isomerase insig. 29 43
  Pseudomonas protegens RBAN4 FABNJH_17125 hyi Hydroxypyruvate isomerase insig. 26 65
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14045 xylose isomerase insig. 23 66
  Serratia liquefaciens MT49 IAI46_12245 TIM barrel protein insig. 27 41
  Ralstonia solanacearum GMI1000 RS_RS00095 hydroxypyruvate isomerase insig. 25 90
  Agrobacterium fabrum C58 Atu3118 hypothetical protein insig. 28 55
  Bacteroides ovatus ATCC 8483 BACOVA_01245 AP endonuclease, family 2 strong 24 83
  Pseudomonas orientalis W4I3 QF045_RS13480 TIM barrel protein insig. 27 45
  Pseudomonas sp. RS175 PFR28_02640 2-oxo-tetronate isomerase insig. 25 36
  Klebsiella michiganensis M5al BWI76_RS10215 hydroxypyruvate isomerase no data 27 39
  Paraburkholderia graminis OAS925 ABIE53_005175 hydroxypyruvate isomerase sig. 26 36
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02518 2-oxo-tetronate isomerase cofit 26 45
  Sinorhizobium meliloti 1021 SMc04130 hypothetical protein insig. 27 58
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02532 Sugar phosphate isomerase/epimerase sig. 25 54
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS06715 TIM barrel protein cofit 24 75
  Acidovorax sp. GW101-3H11 Ac3H11_3735 Hydroxypyruvate isomerase (EC 5.3.1.22) sig. 28 41
  Pseudomonas sp. BP01 JOY50_RS07800 sugar phosphate isomerase/epimerase no data 28 45
  Rhodospirillum rubrum S1H Rru_A2503 Hydroxypyruvate isomerase (NCBI) insig. 27 42
  Acidovorax sp. GW101-3H11 Ac3H11_4282 Hydroxypyruvate isomerase (EC 5.3.1.22) insig. 27 40
  Variovorax sp. SCN45 GFF4813 Sugar phosphate isomerases/epimerase insig. 26 59
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5073 Hydroxypyruvate isomerase (EC 5.3.1.22) insig. 25 34
  Pseudomonas fluorescens FW300-N2C3 AO356_29220 hydroxypyruvate isomerase insig. 27 43
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1792 Hydroxypyruvate isomerase (EC 5.3.1.22) insig. 27 43
  Bosea sp. OAE506 ABIE41_RS16390 sugar phosphate isomerase/epimerase family protein insig. 24 54
  Pseudomonas stutzeri RCH2 Psest_1323 Hydroxypyruvate isomerase insig. 26 76
  Variovorax sp. OAS795 ABID97_RS11055 sugar phosphate isomerase/epimerase family protein insig. 26 54
  Pseudomonas fluorescens SBW25 PFLU_RS11570 hydroxypyruvate isomerase family protein cofit 25 36
  Pseudomonas fluorescens SBW25-INTG PFLU_RS11570 hydroxypyruvate isomerase family protein strong 25 36
  Collimonas humicola GW821-FHT01A05 MPMX01_04065 2-oxo-tetronate isomerase insig. 27 36
  Dickeya dadantii 3937 DDA3937_RS15305 TIM barrel protein insig. 27 64