Homologs of BT3277 from Bacteroides thetaiotaomicron VPI-5482

RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase ECF-type sigma factor

250 hits from BLASTp (E < 0.01)

Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Bacteroides thetaiotaomicron VPI-5482	BT3277		RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	100	100
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_11515		RNA polymerase sigma-70 factor	insig.	40	96
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS06675		RNA polymerase sigma-70 factor	insig.	38	85
o	Phocaeicola dorei CL03T12C01	ABI39_RS12275		RNA polymerase sigma-70 factor	insig.	35	91
	Bacteroides ovatus ATCC 8483	BACOVA_00883		RNA polymerase sigma-70 factor	insig.	34	95
o	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS12920		RNA polymerase sigma-70 factor	cofit	37	90
	Phocaeicola dorei CL03T12C01	ABI39_RS10155		RNA polymerase sigma-70 factor	insig.	36	95
o	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS16435		RNA polymerase sigma-70 factor	strong	34	91
	Bacteroides ovatus ATCC 8483	BACOVA_04151		RNA polymerase sigma-70 factor	strong	36	92
	Bacteroides thetaiotaomicron VPI-5482	BT3993		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	35	84
	Bacteroides ovatus ATCC 8483	BACOVA_05457		RNA polymerase sigma-70 factor	insig.	33	95
	Bacteroides thetaiotaomicron VPI-5482	BT4643		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	33	95
	Bacteroides thetaiotaomicron VPI-5482	BT3269		RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	33	98
o	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS10380		RNA polymerase subunit sigma-70	insig.	36	86
	Bacteroides stercoris CC31F	HMPREF1181_RS06050		RNA polymerase sigma-70 factor	insig.	33	85
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS05630		RNA polymerase sigma-70 factor	sig.	38	80
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_1974		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	34	91
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS15190		RNA polymerase sigma-70 factor	insig.	34	88
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS00770		RNA polymerase sigma-70 factor	sig.	33	92
	Bacteroides ovatus ATCC 8483	BACOVA_04812		RNA polymerase sigma-70 factor	insig.	33	90
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS17460		RNA polymerase sigma-70 factor	insig.	33	90
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_1381		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	34	91
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_4205		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	38	93
	Bacteroides ovatus ATCC 8483	BACOVA_03283		RNA polymerase sigma-70 factor	insig.	33	87
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_3656		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	35	95
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS00265		RNA polymerase sigma-70 factor	insig.	35	90
	Bacteroides ovatus ATCC 8483	BACOVA_04866		RNA polymerase sigma-70 factor	insig.	35	85
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS12340		RNA polymerase sigma-70 factor	cofit	33	85
	Phocaeicola dorei CL03T12C01	ABI39_RS03325		RNA polymerase sigma-70 factor	insig.	30	84
	Bacteroides ovatus ATCC 8483	BACOVA_05556		RNA polymerase sigma-70 factor	insig.	32	86
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS05010		RNA polymerase sigma-70 factor	insig.	30	89
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS11095		hypothetical protein	insig.	37	85
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS09005		RNA polymerase sigma-70 factor	sig.	30	84
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS20645		RNA polymerase subunit sigma-70	insig.	34	89
	Bacteroides thetaiotaomicron VPI-5482	BT4705		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	33	86
	Bacteroides ovatus ATCC 8483	BACOVA_05151		RNA polymerase sigma-70 factor	insig.	31	95
	Bacteroides thetaiotaomicron VPI-5482	BT2198		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	34	88
	Phocaeicola dorei CL03T12C01	ABI39_RS01635		RNA polymerase sigma-70 factor	insig.	34	99
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_3527		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	35	88
	Bacteroides ovatus ATCC 8483	BACOVA_00098		RNA polymerase sigma-70 factor	insig.	33	87
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_09910		hypothetical protein	insig.	33	92
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS06645		RNA polymerase sigma-70 factor	insig.	28	99
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS11460		hypothetical protein	insig.	35	83
	Bacteroides ovatus ATCC 8483	BACOVA_01682		RNA polymerase sigma-70 factor	insig.	33	90
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS14445		sigma-70 family RNA polymerase sigma factor	insig.	34	83
	Phocaeicola dorei CL03T12C01	ABI39_RS10065		sigma-70 family RNA polymerase sigma factor	insig.	34	83
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS02390		RNA polymerase sigma-70 factor	sig.	33	99
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS05820		RNA polymerase sigma-70 factor	insig.	33	92
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_3485		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	34	84
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS05665		RNA polymerase sigma-70 factor	insig.	34	93
	Bacteroides thetaiotaomicron VPI-5482	BT4070		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	34	84
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS05735		RNA polymerase sigma-70 factor	insig.	35	89
	Bacteroides ovatus ATCC 8483	BACOVA_02944		RNA polymerase sigma-70 factor	insig.	33	84
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS05575		RNA polymerase sigma-70 factor	insig.	32	88
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_4327		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	30	85
	Shewanella oneidensis MR-1	SO3840		RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file)	insig.	33	85
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_4566		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	30	100
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS03570		RNA polymerase sigma-70 factor	insig.	32	93
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS18610		RNA polymerase sigma-70 factor	insig.	31	86
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS12095		RNA polymerase subunit sigma-70	insig.	32	86
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS15195		RNA polymerase sigma-70 factor	insig.	32	91
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS14245		RNA polymerase sigma-70 factor	insig.	31	86
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS14155		RNA polymerase sigma-70 factor	insig.	33	84
	Bacteroides ovatus ATCC 8483	BACOVA_04399		Sigma-70 region 2	insig.	33	83
	Phocaeicola dorei CL03T12C01	ABI39_RS06270		RNA polymerase sigma-70 factor	insig.	33	86
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS11705		hypothetical protein	insig.	31	89
	Phocaeicola dorei CL03T12C01	ABI39_RS00120		RNA polymerase sigma-70 factor	insig.	30	91
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS02700		RNA polymerase sigma-70 factor	insig.	29	92
	Shewanella sp. ANA-3	Shewana3_0763		ECF subfamily RNA polymerase sigma-24 factor (RefSeq)	insig.	31	92
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS05370		RNA polymerase subunit sigma-70	insig.	33	90
	Bacteroides thetaiotaomicron VPI-5482	BT2169		RNA polymerase ECF-type sigma factor (NCBI ptt file)	strong	30	94
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS00780		RNA polymerase sigma-70 factor	insig.	31	73
	Phocaeicola dorei CL03T12C01	ABI39_RS05700		RNA polymerase sigma-70 factor	insig.	30	96
	Bacteroides ovatus ATCC 8483	BACOVA_00842		RNA polymerase sigma-70 factor	insig.	30	95
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS12140		hypothetical protein	insig.	30	90
	Phocaeicola dorei CL03T12C01	ABI39_RS10845		RNA polymerase sigma-70 factor	insig.	30	85
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS13700		hypothetical protein	insig.	29	92
	Bacteroides thetaiotaomicron VPI-5482	BT0752		putative RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	28	96
	Bacteroides stercoris CC31F	HMPREF1181_RS01060		RNA polymerase sigma-70 factor	insig.	27	90
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS10800		RNA polymerase sigma-70 factor	insig.	31	86
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS13360		RNA polymerase sigma-70 factor	insig.	28	99
	Phocaeicola dorei CL03T12C01	ABI39_RS10885		sigma-70 family RNA polymerase sigma factor	insig.	33	84
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS21040		RNA polymerase sigma-70 factor	insig.	32	88
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_06740		hypothetical protein	insig.	31	80
	Bacteroides ovatus ATCC 8483	BACOVA_05184		RNA polymerase sigma-70 factor	insig.	26	95
	Bacteroides ovatus ATCC 8483	BACOVA_03176		RNA polymerase sigma-70 factor	insig.	30	92
	Bacteroides thetaiotaomicron VPI-5482	BT1877		RNA polymerase ECF-type sigma factor (NCBI ptt file)	strong	32	99
	Xanthobacter sp. DMC5	GFF1406		RNA polymerase sigma-H factor	insig.	31	94
	Bacteroides ovatus ATCC 8483	BACOVA_02488		RNA polymerase sigma-70 factor	insig.	28	96
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS04910		RNA polymerase sigma-70 factor	insig.	33	84
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS09605		RNA polymerase sigma-70 factor	insig.	33	84
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_4324		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	31	81
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS15055		RNA polymerase sigma-70 factor	sig.	29	85
	Rhodanobacter denitrificans MT42	LRK55_RS05200		sigma-70 family RNA polymerase sigma factor	insig.	28	93
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS05425		sigma-70 family RNA polymerase sigma factor	insig.	28	93
	Bacteroides ovatus ATCC 8483	BACOVA_03855		RNA polymerase sigma-70 factor	insig.	28	79
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_1926		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	30	90
	Bacteroides ovatus ATCC 8483	BACOVA_02727		RNA polymerase sigma-70 factor	insig.	28	86
	Phocaeicola dorei CL03T12C01	ABI39_RS08670		RNA polymerase sigma-70 factor	cofit	30	90
	Bacteroides ovatus ATCC 8483	BACOVA_01977		RNA polymerase sigma-70 factor	cofit	30	95
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS04080		RNA polymerase sigma-70 factor	insig.	30	98
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS02575		hypothetical protein	insig.	28	88
	Cellulophaga baltica 18	M666_RS04155		sigma-70 family RNA polymerase sigma factor	insig.	27	89
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS02810		RNA polymerase sigma-70 factor	strong	28	91
	Phocaeicola dorei CL03T12C01	ABI39_RS06310		RNA polymerase sigma-70 factor	cofit	27	95
	Phocaeicola dorei CL03T12C01	ABI39_RS10300		RNA polymerase sigma-70 factor	sig.	31	97
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS12470		hypothetical protein	insig.	30	87
	Pseudomonas aeruginosa MRSN321	PFGADD_02077	sbrI	ECF family RNA polymerase sigma factor SbrI	insig.	30	92
	Pseudomonas aeruginosa PA14	IKLFDK_14715		ECF family RNA polymerase sigma factor SbrI	insig.	30	92
	Pseudomonas aeruginosa PUPa3	NPBIFN_02116	sbrI	ECF family RNA polymerase sigma factor SbrI	insig.	30	92
	Bacteroides thetaiotaomicron VPI-5482	BT0188		RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	33	87
	Rhodanobacter sp000427505 FW510-R12	LRK53_RS04580		sigma-70 family RNA polymerase sigma factor	insig.	28	93
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS14710		hypothetical protein	insig.	30	90
	Phocaeicola dorei CL03T12C01	ABI39_RS00730		sigma-70 family RNA polymerase sigma factor	insig.	28	84
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS12145		RNA polymerase sigma-70 factor	insig.	31	83
	Alteromonas macleodii MIT1002	MIT1002_03807		Sigma-W factor	insig.	30	93
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS10785		RNA polymerase sigma-70 factor	sig.	26	95
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS11490		RNA polymerase sigma-70 factor	insig.	26	91
	Bacteroides ovatus ATCC 8483	BACOVA_00154		RNA polymerase sigma-70 factor	insig.	26	86
	Bacteroides ovatus ATCC 8483	BACOVA_01251		RNA polymerase sigma-70 factor	sig.	31	87
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS05690		RNA polymerase sigma-70 factor	insig.	30	94
	Variovorax sp. SCN45	GFF3817		RNA polymerase sigma factor	insig.	31	91
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS05970		RNA polymerase sigma factor	insig.	28	79
	Rhodanobacter sp. FW510-T8	OKGIIK_01380	rpoE	RNA polymerase subunit sigma-24	insig.	30	84
	Shewanella loihica PV-4	Shew_2956		ECF subfamily RNA polymerase sigma-24 factor (RefSeq)	insig.	27	90
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS12435		hypothetical protein	insig.	26	99
	Phocaeicola dorei CL03T12C01	ABI39_RS02030		RNA polymerase sigma-70 factor	insig.	31	89
	Bacteroides ovatus ATCC 8483	BACOVA_00284		RNA polymerase sigma-70 factor	insig.	28	93
	Cellulophaga baltica 18	M666_RS01775		RNA polymerase sigma-70 factor	insig.	28	82
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS00160		hypothetical protein	insig.	30	84
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS09110		RNA polymerase sigma-70 factor	sig.	28	85
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS07500		sigma-70 family RNA polymerase sigma factor	insig.	29	86
	Shewanella amazonensis SB2B	Sama_2611		ECF subfamily RNA polymerase sigma-24 factor (RefSeq)	insig.	27	93
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS08220		RNA polymerase sigma-70 factor	insig.	25	95
	Bacteroides thetaiotaomicron VPI-5482	BT1278		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	27	85
	Variovorax sp. OAS795	ABID97_RS08165		sigma-70 family RNA polymerase sigma factor	insig.	31	91
	Bacteroides thetaiotaomicron VPI-5482	BT3748		RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	28	90
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS18950		sigma-70 family RNA polymerase sigma factor	insig.	30	84
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_2852		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	strong	29	91
	Burkholderia phytofirmans PsJN	BPHYT_RS22710		XRE family transcriptional regulator	sig.	29	90
	Phocaeicola dorei CL03T12C01	ABI39_RS02605		RNA polymerase sigma-70 factor	insig.	28	88
	Pseudomonas sp. BP01	JOY50_RS12975		sigma-70 family RNA polymerase sigma factor	insig.	28	90
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS17775		hypothetical protein	sig.	28	91
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS08940		RNA polymerase sigma-70 factor	insig.	30	84
	Rhodanobacter denitrificans MT42	LRK55_RS07240		sigma-70 family RNA polymerase sigma factor	insig.	29	86
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS00590		RNA polymerase sigma-70 factor	insig.	25	93
	Bacteroides stercoris CC31F	HMPREF1181_RS04900		RNA polymerase sigma-70 factor	insig.	31	84
	Bacteroides thetaiotaomicron VPI-5482	BT1617		RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	24	89
	Pseudomonas protegens RBAN4	FABNJH_00920		RNA polymerase sigma factor	insig.	27	93
	Phocaeicola dorei CL03T12C01	ABI39_RS03220		RNA polymerase sigma-70 factor	insig.	30	84
	Bacteroides thetaiotaomicron VPI-5482	BT4250		RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	28	90
	Phocaeicola dorei CL03T12C01	ABI39_RS03415		RNA polymerase sigma-70 factor	insig.	28	85
	Bacteroides stercoris CC31F	HMPREF1181_RS00820		RNA polymerase sigma-70 factor	insig.	24	85
	Bacteroides ovatus ATCC 8483	BACOVA_00771		RNA polymerase sigma-70 factor	insig.	26	96
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS19950		RNA polymerase subunit sigma-24	insig.	34	86
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.3837.1		RNA polymerase sigma-54 factor RpoN	insig.	29	76
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS05780		RNA polymerase sigma-70 factor	insig.	26	89
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_2139		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	34	83
	Bacteroides ovatus ATCC 8483	BACOVA_02037		RNA polymerase sigma-70 factor	insig.	31	88
	Bacteroides stercoris CC31F	HMPREF1181_RS10020		RNA polymerase sigma-70 factor	cofit	28	87
	Burkholderia phytofirmans PsJN	BPHYT_RS21845		hypothetical protein	insig.	27	88
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS16675		hypothetical protein	insig.	27	88
	Rhodanobacter sp. FW510-T8	OKGIIK_13920		RNA polymerase subunit sigma	insig.	30	87
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_02732		RNA polymerase sigma-70 factor, ECF subfamily	insig.	29	90
	Sinorhizobium meliloti 1021	SMc04203		RNA polymerase sigma factor FECI protein	insig.	29	82
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS07135		RNA polymerase sigma factor	insig.	28	87
	Bacteroides stercoris CC31F	HMPREF1181_RS06910		sigma-70 family RNA polymerase sigma factor	insig.	28	81
	Ralstonia solanacearum IBSBF1503	RALBFv3_RS04270		DNA-directed RNA polymerase sigma-70 factor	insig.	29	90
	Ralstonia solanacearum UW163	UW163_RS09400		DNA-directed RNA polymerase sigma-70 factor	insig.	29	90
	Pseudomonas protegens RBAN4	FABNJH_20920		RNA polymerase sigma factor	insig.	28	90
	Lysobacter sp. OAE881	ABIE51_RS16295		sigma-70 family RNA polymerase sigma factor	insig.	27	86
	Bacteroides ovatus ATCC 8483	BACOVA_02951		RNA polymerase sigma-70 factor	insig.	31	94
	Bacteroides ovatus ATCC 8483	BACOVA_01132		sigma-70, region 4	insig.	29	89
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS02095		RNA polymerase sigma factor	insig.	28	84
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS04750		RNA polymerase sigma-70 factor	insig.	28	88
	Pseudomonas lactucae CFBP13502	GEMAOFIL_00391		RNA polymerase sigma-H factor	cofit	27	86
	Pseudomonas orientalis W4I3	QF045_RS03845		RNA polymerase sigma factor	insig.	27	86
	Pseudomonas sp. S08-1	OH686_01025		hypothetical protein	insig.	30	87
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS13420		RNA polymerase sigma-70 factor	insig.	30	92
	Pseudomonas segetis P6	ACVTMO_RS10610		RNA polymerase sigma factor	insig.	30	86
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_2751		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	28	94
	Phocaeicola dorei CL03T12C01	ABI39_RS08620		RNA polymerase sigma-70 factor	insig.	29	90
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS08105		RNA polymerase sigma factor	insig.	29	84
	Bacteroides ovatus ATCC 8483	BACOVA_03594		RNA polymerase sigma-70 factor	insig.	28	94
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS24900		RNA polymerase subunit sigma-70	insig.	29	88
	Phocaeicola dorei CL03T12C01	ABI39_RS00235		sigma-70 family RNA polymerase sigma factor	sig.	28	91
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS07720		sigma-70 family RNA polymerase sigma factor	strong	28	91
	Bacteroides ovatus ATCC 8483	BACOVA_05174		RNA polymerase sigma-70 factor	insig.	30	89
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS00075		RNA polymerase sigma factor	cofit	30	83
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS07030		RNA polymerase sigma-70 factor	insig.	28	85
	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF1181		FIG006045: Sigma factor, ECF subfamily	insig.	28	81
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_1738		RNA polymerase sigma-54 factor RpoN	insig.	28	86
	Rhodopseudomonas palustris CGA009	TX73_003315		RNA polymerase sigma factor	insig.	28	87
	Pseudomonas fluorescens FW300-N2C3	AO356_10740		RNA polymerase subunit sigma	insig.	25	86
	Phocaeicola dorei CL03T12C01	ABI39_RS08655		RNA polymerase sigma-70 factor	insig.	30	92
	Pseudomonas segetis P6	ACVTMO_RS06730		sigma-70 family RNA polymerase sigma factor	insig.	28	92
	Acidovorax sp. GW101-3H11	Ac3H11_1622		RNA polymerase sigma factor	insig.	27	91
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS06675		hypothetical protein	insig.	28	86
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_02680		RNA polymerase subunit sigma-70	insig.	28	85
	Phocaeicola dorei CL03T12C01	ABI39_RS18115		RNA polymerase sigma-70 factor	insig.	28	90
	Pseudomonas simiae WCS417	PS417_00810		RNA polymerase sigma factor	insig.	27	86
	Methylophilus sp. DMC18	GFF2730		RNA polymerase sigma-H factor	no data	26	92
	Rhizobium sp. OAE497	ABIE40_RS01975		sigma-70 family RNA polymerase sigma factor	insig.	26	92
	Phocaeicola dorei CL03T12C01	ABI39_RS00860		RNA polymerase sigma-70 factor	insig.	30	97
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_19605		RNA polymerase	insig.	30	92
	Bacteroides thetaiotaomicron VPI-5482	BT4355		RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	29	100
	Shewanella loihica PV-4	Shew_1476		RNA polymerase sigma factor (RefSeq)	insig.	25	86
	Bacteroides ovatus ATCC 8483	BACOVA_04457		RNA polymerase sigma factor, sigma-70 family	insig.	31	95
	Bacteroides stercoris CC31F	HMPREF1181_RS10740		sigma-70 family RNA polymerase sigma factor	sig.	31	93
	Marinobacter adhaerens HP15	HP15_950		RNA polymerase, sigma-24 subunit, ECF subfamily	insig.	28	90
	Rhodopseudomonas palustris CGA009	TX73_002850		sigma-70 family RNA polymerase sigma factor	insig.	28	86
	Pseudomonas fluorescens SBW25	PFLU_RS00840		RNA polymerase sigma factor	insig.	27	86
	Pseudomonas fluorescens SBW25-INTG	PFLU_RS00840		RNA polymerase sigma factor	sig.	27	86
	Klebsiella michiganensis M5al	BWI76_RS21355		RNA polymerase sigma factor RpoE	no data	27	92
	Burkholderia phytofirmans PsJN	BPHYT_RS24975		RNA polymerase sigma24 factor	strong	26	92
	Vibrio cholerae E7946 ATCC 55056	CSW01_11715		RNA polymerase subunit sigma	insig.	26	88
	Bacteroides thetaiotaomicron VPI-5482	BT2463		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	25	86
	Variovorax sp. SCN45	GFF1525		RNA polymerase ECF-type sigma factor	insig.	25	82
	Bacteroides ovatus ATCC 8483	BACOVA_02117		RNA polymerase sigma-70 factor	insig.	25	94
	Shewanella oneidensis MR-1	SO1986		RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file)	insig.	25	92
	Bacteroides ovatus ATCC 8483	BACOVA_04380		Sigma-70 region 2	insig.	25	86
	Bacteroides thetaiotaomicron VPI-5482	BT3037		RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	28	87
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_4018		RNA polymerase sigma-E factor	insig.	27	86
	Klebsiella pneumoniae MKP103	KDGMDA_28480		RNA polymerase sigma factor RpoE	no data	27	92
	Klebsiella pneumoniae MRSN742743	GJGHJB_01209	rpoE	RNA polymerase sigma factor RpoE	no data	27	92
	Pseudomonas protegens RBAN4	FABNJH_28815	sigK	RNA polymerase sigma factor SigK	insig.	28	90
	Ralstonia sp. UNC404CL21Col	ABZR87_RS16160		sigma-70 family RNA polymerase sigma factor	insig.	28	90
	Cellulophaga baltica 18	M666_RS11420		RNA polymerase sigma factor	insig.	31	82
	Ralstonia solanacearum PSI07	RPSI07_RS13090		DNA-directed RNA polymerase sigma-70 factor	insig.	30	85
	Ralstonia solanacearum GMI1000	RS_RS11855		DNA-directed RNA polymerase sigma-70 factor	insig.	29	85
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS07180		RNA polymerase sigma factor RpoE	strong	26	93
	Cellulophaga baltica 18	M666_RS17335		sigma-70 family RNA polymerase sigma factor	insig.	28	86
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS11925		RNA polymerase sigma-70 factor	strong	26	90
	Rhodopseudomonas palustris CGA009	TX73_023085		RNA polymerase sigma factor	cofit	29	84
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS12860		RNA polymerase sigma-70 factor	cofit	28	94
	Pseudomonas sp. RS175	PFR28_04750		RNA polymerase sigma-H factor	insig.	28	86
	Pseudomonas orientalis W4I3	QF045_RS00535		sigma-70 family RNA polymerase sigma factor	cofit	29	85
	Pseudomonas putida KT2440	PP_3006		RNA polymerase sigma-70 factor, ECF subfamily	insig.	28	86
	Enterobacter asburiae PDN3	EX28DRAFT_2390		RNA polymerase sigma factor, sigma-70 family	cofit	25	90
	Pseudomonas aeruginosa MRSN321	PFGADD_00155	fecI	RNA polymerase sigma factor FecI	insig.	29	75
	Pseudomonas aeruginosa PA14	IKLFDK_24795		RNA polymerase sigma factor	insig.	29	75
	Pseudomonas aeruginosa PUPa3	NPBIFN_00152	fecI	RNA polymerase sigma factor FecI	insig.	29	75
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS07365		RNA polymerase sigma factor	insig.	27	86
	Pseudomonas aeruginosa MRSN321	PFGADD_04374	algU	alginate biosynthesis protein AlgZ/FimS	strong	26	89
	Pseudomonas aeruginosa PA14	IKLFDK_03265		alginate biosynthesis protein AlgZ/FimS	strong	26	89
	Pseudomonas aeruginosa PUPa3	NPBIFN_04430	algU	alginate biosynthesis protein AlgZ/FimS	strong	26	89
	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF365		RNA polymerase sigma factor	insig.	26	92
	Paraburkholderia graminis OAS925	ABIE53_005321		RNA polymerase sigma factor (sigma-70 family)	sig.	28	90
	Cupriavidus basilensis FW507-4G11	RR42_RS14080		RNA polymerase sigma factor RpoE	strong	26	92
	Bacteroides ovatus ATCC 8483	BACOVA_04092		RNA polymerase sigma-70 factor	insig.	25	100