Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Bacteroides thetaiotaomicron VPI-5482 | BT3058 | | transcriptional regulator (NCBI ptt file) | insig. | 100 | 100 |
o | Bacteroides ovatus ATCC 8483 | BACOVA_02674 | | transcriptional regulator, AraC family | insig. | 84 | 98 |
o | Bacteroides stercoris CC31F | HMPREF1181_RS01490 | | helix-turn-helix domain-containing protein | cofit | 68 | 95 |
o | Phocaeicola dorei CL03T12C01 | ABI39_RS05255 | | helix-turn-helix transcriptional regulator | insig. | 56 | 98 |
o | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS11660 | | helix-turn-helix transcriptional regulator | insig. | 56 | 98 |
| Bacteroides stercoris CC31F | HMPREF1181_RS01470 | | helix-turn-helix transcriptional regulator | insig. | 45 | 98 |
| Bacteroides thetaiotaomicron VPI-5482 | BT3052 | | transcriptional regulator (NCBI ptt file) | sig. | 45 | 98 |
| Bacteroides ovatus ATCC 8483 | BACOVA_02670 | | transcriptional regulator, AraC family | insig. | 44 | 98 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS05240 | | AraC family transcriptional regulator | sig. | 41 | 98 |
| Bacteroides stercoris CC31F | HMPREF1181_RS07620 | | helix-turn-helix domain-containing protein | insig. | 30 | 94 |
| Bacteroides stercoris CC31F | HMPREF1181_RS06775 | | helix-turn-helix transcriptional regulator | cofit | 31 | 83 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS15330 | | helix-turn-helix transcriptional regulator | strong | 30 | 84 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2320 | | transcription regulator (NCBI ptt file) | insig. | 30 | 86 |
| Bacteroides ovatus ATCC 8483 | BACOVA_01552 | | transcriptional regulator, AraC family | insig. | 23 | 94 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2889 | | AraC family transcriptional regulator (NCBI ptt file) | sig. | 22 | 94 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS14950 | | helix-turn-helix domain-containing protein | sig. | 28 | 56 |
| Bacteroides stercoris CC31F | HMPREF1181_RS14470 | | helix-turn-helix transcriptional regulator | cofit | 34 | 35 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS10680 | | helix-turn-helix domain-containing protein | insig. | 29 | 56 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS16085 | | helix-turn-helix transcriptional regulator | insig. | 35 | 34 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08555 | | AraC family transcriptional regulator | insig. | 32 | 34 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS19280 | | helix-turn-helix transcriptional regulator | insig. | 29 | 47 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS00530 | | AraC family transcriptional regulator | insig. | 34 | 34 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS16600 | | AraC family transcriptional regulator | insig. | 32 | 31 |
| Pseudomonas stutzeri RCH2 | Psest_2631 | | AraC-type DNA-binding domain-containing proteins | sig. | 36 | 31 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS16625 | | helix-turn-helix transcriptional regulator | insig. | 34 | 31 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS21015 | | AraC family transcriptional regulator | insig. | 25 | 86 |
| Klebsiella michiganensis M5al | BWI76_RS14525 | | AraC family transcriptional regulator | insig. | 31 | 31 |
| Escherichia fergusonii Becca | EFB2_01942 | | hypothetical protein | insig. | 31 | 31 |
| Escherichia coli ECOR38 | HEPCGN_03575 | ybtA | yersiniabactin transcriptional regulator YbtA | insig. | 31 | 31 |
| Escherichia coli Nissle 1917 | ECOLIN_RS11385 | | yersiniabactin transcriptional regulator YbtA | no data | 31 | 31 |
| Escherichia coli ECRC100 | OKFHMN_09130 | glxA | AraC family transcriptional regulator | insig. | 36 | 29 |
| Escherichia coli ECRC101 | MCAODC_28355 | glxA | AraC family transcriptional regulator | insig. | 36 | 29 |
| Escherichia coli ECRC98 | JDDGAC_12780 | glxA | AraC family transcriptional regulator | cofit | 36 | 29 |
| Escherichia coli ECRC99 | KEDOAH_18835 | glxA | AraC family transcriptional regulator | no data | 36 | 29 |
| Escherichia coli ECRC102 | NIAGMN_07195 | glxA | AraC family transcriptional regulator | insig. | 36 | 29 |
| Pseudomonas fluorescens SBW25 | PFLU_RS20105 | | helix-turn-helix domain-containing protein | insig. | 34 | 29 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS20105 | | helix-turn-helix domain-containing protein | insig. | 34 | 29 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_00685 | | AraC family transcriptional regulator | insig. | 34 | 29 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_224 | | transcription factor nitR | insig. | 34 | 29 |
| Serratia liquefaciens MT49 | IAI46_14910 | | helix-turn-helix domain-containing protein | insig. | 28 | 39 |
| Escherichia coli ECOR27 | NOLOHH_01945 | glxA | AraC family transcriptional regulator | insig. | 36 | 29 |
| Escherichia coli BL21 | ECD_00257 | | putative DNA-binding transcriptional regulator | strong | 36 | 29 |
| Escherichia coli ECRC62 | BNILDI_00070 | glxA | AraC family transcriptional regulator | cofit | 36 | 29 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03381 | | Right origin-binding protein | insig. | 36 | 29 |
| Bacteroides stercoris CC31F | HMPREF1181_RS09760 | | helix-turn-helix transcriptional regulator | insig. | 30 | 36 |
| Erwinia tracheiphila SCR3 | LU632_RS23250 | soxS | superoxide response transcriptional regulator SoxS | insig. | 28 | 33 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS05435 | | AraC family transcriptional regulator | insig. | 31 | 35 |
| Paraburkholderia graminis OAS925 | ABIE53_004121 | | AraC family carnitine catabolism transcriptional activator | insig. | 40 | 32 |
| Pseudomonas simiae WCS417 | PS417_18210 | | AraC family transcriptional regulator | insig. | 33 | 29 |
| Ralstonia solanacearum PSI07 | RPSI07_RS16625 | | AraC family transcriptional regulator | insig. | 29 | 28 |
| Rhodospirillum rubrum S1H | Rru_A1456 | | Transcriptional Regulator, AraC family (NCBI) | insig. | 27 | 34 |
| Bacteroides stercoris CC31F | HMPREF1181_RS14725 | | helix-turn-helix transcriptional regulator | insig. | 27 | 48 |
| Sinorhizobium meliloti 1021 | SMc02888 | | transcriptional regulator | insig. | 26 | 34 |
| Escherichia coli ECOR38 | HEPCGN_07655 | glxA | AraC family transcriptional regulator | cofit | 35 | 29 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS05990 | | AraC family transcriptional regulator | insig. | 33 | 29 |
| Escherichia fergusonii Becca | EFB2_03739 | | Right origin-binding protein | insig. | 35 | 29 |
| Escherichia coli Nissle 1917 | ECOLIN_RS01970 | | helix-turn-helix domain-containing protein | no data | 35 | 29 |
| Pseudomonas syringae pv. syringae B728a | Psyr_3566 | | transcriptional regulator, AraC family | insig. | 31 | 33 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3566 | | transcriptional regulator, AraC family | insig. | 31 | 33 |
| Pseudomonas fluorescens SBW25 | PFLU_RS23325 | | GlxA family transcriptional regulator | strong | 31 | 33 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS23325 | | GlxA family transcriptional regulator | strong | 31 | 33 |
| Pseudomonas putida KT2440 | PP_4482 | | Transcriptional regulator, AraC family | strong | 31 | 33 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_18720 | | AraC family transcriptional regulator | strong | 31 | 33 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5664 | | Arginine pathway regulatory protein ArgR, repressor of arg regulon | strong | 31 | 33 |
| Pseudomonas simiae WCS417 | PS417_21720 | | AraC family transcriptional regulator | no data | 31 | 33 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_1968 | | Arginine pathway regulatory protein ArgR, repressor of arg regulon | strong | 31 | 33 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3437 | | Arginine pathway regulatory protein ArgR, repressor of arg regulon | strong | 31 | 33 |
| Burkholderia phytofirmans PsJN | BPHYT_RS22395 | | AraC family transcriptional regulator | strong | 36 | 32 |
| Pseudomonas sp. RS175 | PFR28_03284 | | HTH-type transcriptional regulator CdhR | strong | 31 | 33 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_03035 | | AraC family transcriptional regulator | strong | 31 | 33 |
| Serratia liquefaciens MT49 | IAI46_09155 | | AraC family transcriptional regulator | insig. | 27 | 43 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS06070 | | helix-turn-helix domain-containing protein | insig. | 29 | 32 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS36365 | | AraC family transcriptional regulator | insig. | 26 | 43 |
| Pseudomonas sp. S08-1 | OH686_21280 | | Arginine pathway regulatory protein ArgR, repressor of arg regulon | strong | 31 | 33 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS18555 | | AraC family transcriptional regulator | insig. | 28 | 31 |
| Acinetobacter radioresistens SK82 | MPMX26_00941 | | HTH-type transcriptional activator RhaS | no data | 28 | 35 |
| Pantoea sp. MT58 | IAI47_17770 | | superoxide response transcriptional regulator SoxS | insig. | 27 | 33 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS08390 | | GlxA family transcriptional regulator | insig. | 37 | 32 |
| Dickeya dadantii 3937 | DDA3937_RS20835 | | AraC family transcriptional regulator VfmE | strong | 31 | 31 |
| Ralstonia solanacearum GMI1000 | RS_RS09150 | | AraC family transcriptional regulator | insig. | 29 | 28 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4485 | | Transcriptional activator RamA | insig. | 25 | 37 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU2378 | foxR | transcriptional regulator, AraC family (TIGR) | insig. | 24 | 35 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS05855 | | AraC family transcriptional regulator | insig. | 32 | 33 |
| Dickeya dadantii 3937 | DDA3937_RS05590 | | AraC family transcriptional regulator | insig. | 32 | 28 |
| Dickeya dianthicola 67-19 | HGI48_RS00410 | | AraC family transcriptional regulator VfmE | cofit | 31 | 31 |
| Dickeya dianthicola ME23 | DZA65_RS00410 | | helix-turn-helix transcriptional regulator | strong | 31 | 31 |
| Pseudomonas sp. S08-1 | OH686_07125 | | Transcriptional regulator, AraC family | insig. | 29 | 34 |
| Marinobacter adhaerens HP15 | HP15_2206 | | AraC-type DNA-binding domain-containing protein | cofit | 28 | 34 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS10800 | | AraC family transcriptional regulator | strong | 25 | 59 |
| Sinorhizobium meliloti 1021 | SMa1822 | | hypothetical protein | insig. | 29 | 31 |
| Bacteroides thetaiotaomicron VPI-5482 | BT4396 | | transcriptional regulator (NCBI ptt file) | sig. | 31 | 35 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03176 | | transcriptional regulator, AraC family with amidase-like domain | insig. | 37 | 32 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1041 | | transcriptional regulator, AraC family | insig. | 31 | 33 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1041 | | transcriptional regulator, AraC family | insig. | 31 | 33 |
| Pseudomonas sp. RS175 | PFR28_02895 | | HTH-type transcriptional activator RhaS | insig. | 31 | 30 |
| Pectobacterium carotovorum WPP14 | HER17_RS17850 | | AraC family transcriptional regulator | insig. | 29 | 33 |
| Serratia liquefaciens MT49 | IAI46_18950 | | DNA-3-methyladenine glycosylase 2 | insig. | 27 | 40 |
| Pseudomonas simiae WCS417 | PS417_13290 | | AraC family transcriptional regulator | sig. | 25 | 34 |
| Sinorhizobium meliloti 1021 | SM_b21649 | | AraC family transcriptional regulator | strong | 31 | 40 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS21060 | | GlxA family transcriptional regulator | insig. | 29 | 32 |