Homologs of SOA0086 from Shewanella oneidensis MR-1

site-specific recombinase, resolvase family (NCBI ptt file)
SEED: Resolvase/integrase Bin

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SOA0086 site-specific recombinase, resolvase family (NCBI ptt file) insig. 100 100
o Synechocystis sp000284455 PCC 6803 SGL_RS01270 recombinase family protein insig. 53 94
o Kangiella aquimarina DSM 16071 B158DRAFT_0960 Site-specific recombinases, DNA invertase Pin homologs insig. 53 90
o Sinorhizobium meliloti 1021 SMc02287 DNA-invertase insig. 43 92
o Rhodopseudomonas palustris CGA009 TX73_023600 recombinase family protein insig. 44 92
  Sphingobium sp. HT1-2 GFF5292 Phage DNA invertase cofit 41 91
  Azospirillum sp. SherDot2 MPMX19_01313 DNA-invertase hin insig. 42 91
o Enterobacter sp. TBS_079 MPMX20_04745 Transposon Tn3 resolvase insig. 43 93
  Azospirillum sp. SherDot2 MPMX19_01561 DNA-invertase hin insig. 42 91
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS22005 recombinase family protein cofit 41 92
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS20365 recombinase family protein cofit 38 93
  Azospirillum sp. SherDot2 MPMX19_05448 DNA-invertase hin insig. 42 91
  Azospirillum sp. SherDot2 MPMX19_06460 DNA-invertase hin insig. 42 92
  Variovorax sp. SCN45 GFF7081 Mobile element protein no data 36 91
  Shewanella oneidensis MR-1 SOA0019 ISSod9, DNA-invertase (NCBI ptt file) no data 37 91
  Shewanella oneidensis MR-1 SOA0170 ISSod9, DNA-invertase (NCBI ptt file) no data 37 91
  Rhodospirillum rubrum S1H Rru_B0010 Resolvase (NCBI) insig. 37 91
  Magnetospirillum magneticum AMB-1 AMB_RS16510 recombinase family protein cofit 40 90
  Klebsiella michiganensis M5al BWI76_RS12375 DNA-invertase hin sig. 38 90
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3230.1 Phage DNA invertase insig. 36 94
  Magnetospirillum magneticum AMB-1 AMB_RS16710 recombinase family protein insig. 38 89
  Shewanella loihica PV-4 Shew_3862 resolvase domain-containing protein (RefSeq) insig. 38 92
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_25760 Recombinase family protein cofit 37 92
  Erwinia tracheiphila SCR3 LU632_RS10670 recombinase family protein sig. 37 92
  Pseudomonas putida KT2440 PP_5490 site-specific DNA recombinase insig. 37 93
  Escherichia coli ECOR38 HEPCGN_24370 DNA invertase insig. 37 89
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1543 DNA-invertase insig. 35 91
  Magnetospirillum magneticum AMB-1 AMB_RS15985 recombinase family protein cofit 38 89
  Cupriavidus basilensis FW507-4G11 RR42_RS00040 recombinase insig. 45 64
  Magnetospirillum magneticum AMB-1 AMB_RS10415 recombinase family protein insig. 37 92
  Azospirillum sp. SherDot2 MPMX19_06437 DNA-invertase hin insig. 39 93
  Sphingobium sp. HT1-2 GFF5326 Phage integrase, site-specific serine recombinase cofit 37 91
  Dinoroseobacter shibae DFL-12 Dshi_3683 Resolvase domain (RefSeq) insig. 38 91
o Pseudomonas segetis P6 MPMX49_02961 DNA-invertase hin insig. 38 94
  Escherichia coli ECOR38 HEPCGN_04245 DNA-invertase insig. 38 90
  Pseudomonas stutzeri RCH2 Psest_4043 Site-specific recombinases, DNA invertase Pin homologs insig. 36 94
  Azospirillum brasilense Sp245 AZOBR_RS32770 invertase no data 35 94
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_19155 DNA-invertase no data 37 91
  Erwinia tracheiphila SCR3 LU632_RS26065 recombinase family protein insig. 37 93
  Azospirillum brasilense Sp245 AZOBR_RS20835 DNA resolvase no data 37 96
  Escherichia fergusonii Becca EFB2_03222 DNA-invertase hin insig. 35 94
  Pseudomonas stutzeri RCH2 Psest_4383 Site-specific recombinases, DNA invertase Pin homologs sig. 39 91
  Escherichia coli ECRC98 JDDGAC_05745 spoIVCA Hin recombinase insig. 38 89
  Dinoroseobacter shibae DFL-12 Dshi_4084 Resolvase domain (RefSeq) insig. 34 90
o Escherichia coli ECRC100 OKFHMN_11730 spoIVCA resolvase insig. 35 92
o Escherichia coli ECRC101 MCAODC_02245 spoIVCA resolvase insig. 35 92
o Escherichia coli ECRC102 NIAGMN_09580 spoIVCA resolvase insig. 35 92
o Escherichia coli ECRC99 KEDOAH_16415 spoIVCA resolvase no data 35 92
  Escherichia coli ECOR38 HEPCGN_26710 spoIVCA DNA-invertase insig. 35 92
  Sphingobium sp. HT1-2 GFF5286 hypothetical protein cofit 36 91
  Sphingobium sp. HT1-2 GFF5317 hypothetical protein cofit 32 98
  Dickeya dianthicola 67-19 HGI48_RS15525 recombinase family protein insig. 37 94
  Methanococcus maripaludis S2 MMP_RS03990 recombinase family protein insig. 35 90
  Dechlorosoma suillum PS Dsui_2500 site-specific recombinase, DNA invertase Pin cofit 35 98
  Escherichia coli ECRC101 MCAODC_20820 spoIVCA DNA-invertase insig. 33 97
o Variovorax sp. OAS795 ABID97_RS17765 recombinase family protein insig. 36 93
  Escherichia coli ECRC98 JDDGAC_09160 spoIVCA DNA-invertase strong 33 97
  Escherichia coli BW25113 b1158 pin e14 prophage; site-specific DNA recombinase (NCBI) sig. 35 89
  Enterobacter asburiae PDN3 EX28DRAFT_3112 Site-specific recombinases, DNA invertase Pin homologs insig. 34 96
  Escherichia coli ECRC62 BNILDI_21055 DNA-invertase cofit 33 89
  Erwinia tracheiphila SCR3 LU632_RS25210 recombinase family protein insig. 32 94
  Escherichia coli ECRC100 OKFHMN_09410 pinE site-specific DNA recombinase cofit 35 89
  Escherichia coli ECRC98 JDDGAC_13045 pinE site-specific DNA recombinase insig. 35 89
  Pseudomonas syringae pv. syringae B728a Psyr_2668 Helix-turn-helix, Fis-type insig. 38 89
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2668 Helix-turn-helix, Fis-type insig. 38 89
o Methylophilus sp. DMC18 GFF745 Tn3 family transposase ISYps3 insig. 35 94
o Escherichia coli Nissle 1917 ECOLIN_RS26325 recombinase family protein insig. 34 90
  Methanococcus maripaludis JJ MMJJ_RS02615 recombinase family protein no data 34 90
  Escherichia coli ECRC101 MCAODC_00110 pinE site-specific DNA recombinase insig. 34 91
  Escherichia coli ECRC102 NIAGMN_07460 pinE site-specific DNA recombinase insig. 34 91
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1246 RlgA insig. 41 70
  Dickeya dianthicola ME23 DZA65_RS16340 recombinase family protein insig. 36 93
  Sphingobium sp. HT1-2 GFF3226 Serine recombinase, PinQ/PinR-type cofit 36 91
  Shewanella loihica PV-4 Shew_0991 resolvase domain-containing protein (RefSeq) no data 35 90
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS16275 recombinase family protein insig. 33 96
o Ralstonia solanacearum UW163 UW163_RS01540 recombinase family protein insig. 35 93
  Dickeya dianthicola 67-19 HGI48_RS12185 recombinase family protein insig. 37 93
  Sphingobium sp. HT1-2 GFF4499 hypothetical protein cofit 34 94
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02167 Tn3 family transposase ISYps3 cofit 33 91
o Escherichia coli BL21 ECD_01504 Qin prophage; putative site-specific recombinase no data 33 91
  Escherichia coli BW25113 b1374 pinR Rac prophage; predicted site-specific recombinase (NCBI) no data 33 91
  Escherichia coli BW25113 b1545 pinQ Qin prophage; predicted site-specific recombinase (NCBI) insig. 33 91
  Sphingobium sp. HT1-2 GFF5199 hypothetical protein cofit 34 89
  Escherichia coli BL21 ECD_01345 Rac prophage; putative site-specific recombinase no data 33 91
o Escherichia coli ECOR27 NOLOHH_18610 pinR Serine recombinase PinR cofit 33 91
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS12085 recombinase family protein insig. 31 97
  Erwinia tracheiphila SCR3 LU632_RS04400 recombinase family protein insig. 36 91
  Ralstonia solanacearum PSI07 RPSI07_RS15555 recombinase family protein insig. 37 88
  Dickeya dianthicola ME23 DZA65_RS12635 recombinase family protein insig. 36 93
  Dickeya dadantii 3937 DDA3937_RS12095 recombinase family protein insig. 42 61
  Azospirillum sp. SherDot2 MPMX19_06678 hypothetical protein no data 39 72
  Dinoroseobacter shibae DFL-12 Dshi_3680 Resolvase domain (RefSeq) no data 38 94
  Dinoroseobacter shibae DFL-12 Dshi_3876 Resolvase domain (RefSeq) no data 38 94
  Dinoroseobacter shibae DFL-12 Dshi_4081 Resolvase domain (RefSeq) no data 38 94
  Sphingobium sp. HT1-2 GFF4321 Phage integrase, site-specific serine recombinase cofit 42 61
  Azospirillum sp. SherDot2 MPMX19_06322 hypothetical protein insig. 40 61
  Azospirillum brasilense Sp245 AZOBR_RS30300 resolvase insig. 34 92
  Dinoroseobacter shibae DFL-12 Dshi_4105 Resolvase domain (RefSeq) insig. 38 72
  Paraburkholderia graminis OAS925 ABIE53_000503 DNA invertase Pin-like site-specific DNA recombinase sig. 38 70
  Pseudomonas segetis P6 MPMX49_02758 DNA-invertase hin insig. 35 92