Homologs of SO4207 from Shewanella oneidensis MR-1

GGDEF domain protein (NCBI ptt file)
SEED: GGDEF domain protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO4207 GGDEF domain protein (NCBI ptt file) strong 100 100
o Shewanella sp. ANA-3 Shewana3_3733 diguanylate cyclase (RefSeq) sig. 88 100
o Shewanella amazonensis SB2B Sama_3210 GGDEF domain-containing protein (RefSeq) strong 58 93
o Shewanella loihica PV-4 Shew_3381 diguanylate cyclase (RefSeq) strong 56 94
o Alteromonas macleodii MIT1002 MIT1002_00511 Bacteriophytochrome cph2 insig. 35 92
o Marinobacter adhaerens HP15 HP15_3763 response regulator receiver domain protein (CheY) insig. 31 90
  Marinobacter adhaerens HP15 HP15_2105 response regulator receiver domain protein (CheY-) insig. 29 86
o Pseudomonas sp. S08-1 OH686_21285 hypothetical protein cofit 31 91
o Pseudomonas stutzeri RCH2 Psest_0202 diguanylate cyclase (GGDEF) domain insig. 31 91
  Pseudomonas sp. S08-1 OH686_13445 hypothetical protein insig. 29 92
o Lysobacter sp. OAE881 ABIE51_RS13340 diguanylate cyclase insig. 28 86
o Dechlorosoma suillum PS Dsui_0513 diguanylate cyclase (GGDEF) domain-containing protein cofit 29 87
  Dechlorosoma suillum PS Dsui_0789 diguanylate cyclase (GGDEF) domain-containing protein insig. 44 32
  Pseudomonas sp. S08-1 OH686_15950 hypothetical protein insig. 27 85
  Synechocystis sp000284455 PCC 6803 SGL_RS04225 sensor domain-containing diguanylate cyclase sig. 41 34
  Pseudomonas sp. BP01 JOY50_RS11815 wspR Wsp signal transduction system regulator diguanylate cyclase WspR insig. 46 29
  Pseudomonas fluorescens FW300-N2E3 AO353_15375 deoxyribonuclease strong 44 27
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1660 GGDEF domain protein insig. 45 28
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_936 GGDEF domain protein cofit 44 28
  Pseudomonas putida KT2440 PP_1494 Response regulator/GGDEF domain protein strong 45 29
  Pseudomonas aeruginosa PA14 IKLFDK_18905 Wsp signal transduction system regulator diguanylate cyclase WspR insig. 46 28
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5815 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 46 29
  Pseudomonas sp. S08-1 OH686_11240 hypothetical protein insig. 44 28
  Synechocystis sp000284455 PCC 6803 SGL_RS15095 PAS domain S-box protein sig. 43 32
  Pseudomonas stutzeri RCH2 Psest_0700 diguanylate cyclase (GGDEF) domain insig. 29 86
  Pseudomonas syringae pv. syringae B728a Psyr_1125 GGDEF domain protein insig. 42 28
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1125 GGDEF domain protein insig. 42 28
  Pseudomonas fluorescens FW300-N2C3 AO356_17195 deoxyribonuclease sig. 46 26
  Shewanella oneidensis MR-1 SO4407 GGDEF family protein (NCBI ptt file) insig. 40 33
  Pseudomonas sp. SVBP6 COO64_RS05065 PleD family two-component system response regulator insig. 45 29
  Herbaspirillum seropedicae SmR1 HSERO_RS23570 diguanylate cyclase insig. 42 32
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5364 GGDEF domain protein insig. 47 26
  Pseudomonas syringae pv. syringae B728a Psyr_1309 response regulator receiver modulated diguanylate cyclase insig. 45 29
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1309 response regulator receiver modulated diguanylate cyclase insig. 45 29
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3039 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 44 29
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS16595 sensor domain-containing diguanylate cyclase insig. 43 31
  Ralstonia solanacearum UW163 UW163_RS17950 sensor domain-containing diguanylate cyclase insig. 43 31
  Pseudomonas fluorescens GW456-L13 PfGW456L13_588 GGDEF domain protein insig. 39 34
  Pseudomonas sp. DMC3 GFF4411 hypothetical protein insig. 44 28
  Pseudomonas sp. RS175 PFR28_03580 hypothetical protein insig. 43 27
  Cupriavidus basilensis FW507-4G11 RR42_RS34850 diguanylate cyclase insig. 42 30
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01602 diguanylate cyclase (GGDEF) domain-containing protein insig. 43 29
  Xanthobacter sp. DMC5 GFF2622 hypothetical protein insig. 41 30
  Ralstonia solanacearum PSI07 RPSI07_RS07115 GGDEF domain-containing protein insig. 44 30
  Herbaspirillum seropedicae SmR1 HSERO_RS15135 diguanylate cyclase sig. 44 28
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4751 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 43 29
o Rhodanobacter sp. FW510-T8 OKGIIK_09110 Diguanylate cyclase insig. 25 90
  Shewanella amazonensis SB2B Sama_2970 diguanylate cyclase (RefSeq) insig. 25 86
  Pseudomonas fluorescens FW300-N2E3 AO353_28530 diguanylate cyclase insig. 40 29
  Xanthobacter sp. DMC5 GFF713 hypothetical protein insig. 43 29
  Desulfovibrio vulgaris Hildenborough JW710 DVU3106 GGDEF domain protein (TIGR) sig. 43 28
  Pseudomonas sp. DMC3 GFF1350 hypothetical protein insig. 40 32
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02648 diguanylate cyclase (GGDEF) domain-containing protein insig. 41 28
  Pseudomonas sp. SVBP6 COO64_RS08975 diguanylate cyclase cofit 43 29
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01138 hypothetical protein cofit 44 27
  Marinobacter adhaerens HP15 HP15_3631 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 24 82
  Ralstonia sp. UNC404CL21Col ABZR87_RS17590 sensor domain-containing diguanylate cyclase insig. 43 30
  Ralstonia solanacearum GMI1000 RS_RS24470 GGDEF domain-containing protein insig. 43 30
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01367 Protein-glutamate methylesterase/protein-glutamine glutaminase insig. 43 29
  Vibrio cholerae E7946 ATCC 55056 CSW01_12010 GGDEF domain-containing protein insig. 40 31
  Rhodopseudomonas palustris CGA009 TX73_004565 diguanylate cyclase insig. 46 28
  Rahnella sp. WP5 EX31_RS24850 diguanylate cyclase insig. 42 30
  Acidovorax sp. GW101-3H11 Ac3H11_3285 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 41 36
  Pseudomonas fluorescens FW300-N2E3 AO353_10960 hypothetical protein insig. 40 35
  Variovorax sp. SCN45 GFF4645 GGDEF domain protein insig. 44 32
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3834 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 43 29
  Burkholderia phytofirmans PsJN BPHYT_RS19780 diguanylate cyclase insig. 43 27
  Kangiella aquimarina DSM 16071 B158DRAFT_0724 diguanylate cyclase (GGDEF) domain insig. 36 36
  Synechocystis sp000284455 PCC 6803 SGL_RS03035 diguanylate cyclase sig. 43 28
  Dechlorosoma suillum PS Dsui_1430 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 28
  Pseudomonas sp. RS175 PFR28_04630 hypothetical protein insig. 40 32
  Dechlorosoma suillum PS Dsui_2486 diguanylate cyclase (GGDEF) domain-containing protein cofit 45 31
  Pseudomonas sp. S08-1 OH686_18335 hypothetical protein insig. 41 31
  Paraburkholderia sabiae LMG 24235 QEN71_RS10075 diguanylate cyclase insig. 44 28
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00290 hypothetical protein cofit 43 28
  Pseudomonas fluorescens SBW25 PFLU_RS06060 diguanylate cyclase insig. 43 29
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06060 diguanylate cyclase insig. 43 29
  Pseudomonas sp. DMC3 GFF2013 Protein-glutamate methylesterase/protein-glutamine glutaminase cofit 42 29
  Azospirillum sp. SherDot2 MPMX19_02025 Protein-glutamate methylesterase/protein-glutamine glutaminase insig. 42 26
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0300 diguanylate cyclase (GGDEF) domain insig. 41 29
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4156 GGDEF domain protein insig. 44 27
  Pseudomonas fluorescens FW300-N2C3 AO356_01855 diguanylate cyclase insig. 44 28
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_40 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 43 28
  Pseudomonas segetis P6 MPMX49_00315 hypothetical protein insig. 43 26
  Pseudomonas simiae WCS417 PS417_04675 deoxyribonuclease sig. 43 26
  Pseudomonas simiae WCS417 PS417_05990 diguanylate cyclase sig. 42 29
  Ralstonia solanacearum GMI1000 RS_RS19075 sensor domain-containing diguanylate cyclase insig. 41 27
  Rhizobium sp. OAE497 ABIE40_RS04125 diguanylate cyclase insig. 41 28
  Kangiella aquimarina DSM 16071 B158DRAFT_0723 diguanylate cyclase (GGDEF) domain insig. 35 34
  Shewanella sp. ANA-3 Shewana3_2435 diguanylate cyclase (RefSeq) insig. 34 36
  Synechococcus elongatus PCC 7942 Synpcc7942_2534 diguanylate cyclase with GAF sensor insig. 42 28
  Pseudomonas fluorescens FW300-N2E3 AO353_04215 diguanylate cyclase insig. 42 29
  Pseudomonas stutzeri RCH2 Psest_0188 diguanylate cyclase (GGDEF) domain insig. 40 33
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1357 PUTATIVE TRANSMEMBRANE PROTEIN insig. 41 28
  Pseudomonas fluorescens FW300-N2C3 AO356_25285 diguanylate cyclase insig. 40 30
  Pseudomonas sp. SVBP6 COO64_RS11300 sensor domain-containing diguanylate cyclase insig. 41 28
  Pseudomonas putida KT2440 PP_3932 Diguanylate cyclase insig. 46 27
  Ralstonia sp. UNC404CL21Col ABZR87_RS03580 sensor domain-containing diguanylate cyclase insig. 40 29
  Pseudomonas sp. RS175 PFR28_00357 Protein-glutamate methylesterase/protein-glutamine glutaminase insig. 42 29
  Paraburkholderia graminis OAS925 ABIE53_000542 diguanylate cyclase (GGDEF)-like protein insig. 41 28