Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Shewanella oneidensis MR-1 | SO3884 | | site-specific recombinase, phage integrase family (NCBI ptt file) | insig. | 100 | 100 |
o | Alteromonas macleodii MIT1002 | MIT1002_03221 | | Tyrosine recombinase XerC | insig. | 53 | 96 |
o | Enterobacter sp. TBS_079 | MPMX20_04667 | | Tyrosine recombinase XerC | sig. | 29 | 96 |
o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4812 | | Site-specific recombinase, phage integrase family | insig. | 28 | 94 |
o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3231 | | Site-specific recombinase, phage integrase family | insig. | 27 | 91 |
o | Pseudomonas fluorescens SBW25 | PFLU_RS14840 | | tyrosine-type recombinase/integrase | insig. | 27 | 93 |
o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS14840 | | tyrosine-type recombinase/integrase | insig. | 27 | 93 |
o | Pseudomonas simiae WCS417 | PS417_13780 | | integrase | strong | 27 | 91 |
o | Pseudomonas putida KT2440 | PP_2841 | | Site-specific recombinase, phage integrase family | insig. | 27 | 87 |
o | Pseudomonas syringae pv. syringae B728a | Psyr_2751 | | Phage integrase:Phage integrase, N-terminal SAM-like protein | insig. | 28 | 89 |
o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2751 | | Phage integrase:Phage integrase, N-terminal SAM-like protein | insig. | 28 | 89 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2742 | | integrase, site-specific recombinase (NCBI ptt file) | insig. | 27 | 85 |
| Bacteroides ovatus ATCC 8483 | BACOVA_01050 | | site-specific recombinase, phage integrase family/ribosomal subunit interface protein | insig. | 26 | 87 |
| Alteromonas macleodii MIT1002 | MIT1002_00157 | | Tyrosine recombinase XerC | insig. | 33 | 70 |
| Shewanella loihica PV-4 | Shew_0325 | | tyrosine recombinase XerC (RefSeq) | sig. | 27 | 89 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS10885 | | tyrosine recombinase XerC | sig. | 29 | 72 |
| Shewanella sp. ANA-3 | Shewana3_0393 | | tyrosine recombinase XerC (RefSeq) | strong | 29 | 77 |
| Dinoroseobacter shibae DFL-12 | Dshi_3696 | | integrase family protein (RefSeq) | no data | 32 | 82 |
| Dinoroseobacter shibae DFL-12 | Dshi_4006 | | integrase family protein (RefSeq) | no data | 32 | 82 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS17800 | | tyrosine-type recombinase/integrase | insig. | 26 | 85 |
| Shewanella amazonensis SB2B | Sama_3247 | | integrase/recombinase XerC (RefSeq) | strong | 31 | 71 |
| Azospirillum sp. SherDot2 | MPMX19_00151 | | Tyrosine recombinase XerC | insig. | 28 | 74 |
| Shewanella oneidensis MR-1 | SO4306 | xerC | integrase/recombinase XerC (NCBI ptt file) | strong | 27 | 77 |
| Bifidobacterium breve UCC2003 | BBR_RS16755 | | site-specific tyrosine recombinase XerD | strong | 29 | 70 |
| Castellaniella sp019104865 MT123 | ABCV34_RS00515 | | site-specific tyrosine recombinase XerD | insig. | 31 | 71 |
| Pseudomonas sp. S08-1 | OH686_17750 | | tyrosine recombinase XerD | insig. | 27 | 92 |
| Azospirillum sp. SherDot2 | MPMX19_00143 | | Tyrosine recombinase XerC | insig. | 29 | 74 |
| Azospirillum brasilense Sp245 | AZOBR_RS03240 | | recombinase XerD | insig. | 28 | 71 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS02835 | | integrase | strong | 24 | 89 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU1654 | xerD | site-specific recombinase, phage integrase family (TIGR) | sig. | 28 | 70 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_0359 | | tyrosine recombinase XerD (RefSeq) | strong | 26 | 70 |
| Dinoroseobacter shibae DFL-12 | Dshi_3629 | | integrase family protein (RefSeq) | no data | 30 | 59 |
| Dinoroseobacter shibae DFL-12 | Dshi_3661 | | integrase family protein (RefSeq) | no data | 30 | 59 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS15025 | | tyrosine recombinase XerC | strong | 28 | 87 |
| Pectobacterium carotovorum WPP14 | HER17_RS17890 | | site-specific tyrosine recombinase XerD | strong | 32 | 54 |
| Dickeya dadantii 3937 | DDA3937_RS03300 | | site-specific tyrosine recombinase XerD | insig. | 28 | 88 |
| Erwinia tracheiphila SCR3 | LU632_RS24135 | xerC | tyrosine recombinase XerC | no data | 27 | 86 |
| Rhizobium sp. OAE497 | ABIE40_RS17950 | | tyrosine recombinase XerC | insig. | 27 | 76 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_00650 | | tyrosine recombinase XerC | strong | 27 | 69 |
| Magnetospirillum magneticum AMB-1 | AMB_RS19880 | | site-specific tyrosine recombinase XerD | cofit | 32 | 55 |
| Pseudomonas putida KT2440 | PP_5230 | | Tyrosine recombinase XerC | strong | 27 | 89 |
| Variovorax sp. SCN45 | GFF2772 | | Site-specific tyrosine recombinase XerD | strong | 36 | 54 |
| Variovorax sp. OAS795 | ABID97_RS20265 | | site-specific tyrosine recombinase XerD | insig. | 35 | 54 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_09050 | | recombinase XerC | sig. | 29 | 76 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_19035 | | integrase | no data | 28 | 72 |
| Pseudomonas sp. RS175 | PFR28_04378 | | Tyrosine recombinase XerC | strong | 25 | 89 |
| Erwinia tracheiphila SCR3 | LU632_RS05975 | xerD | site-specific tyrosine recombinase XerD | no data | 32 | 54 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS03835 | | tyrosine-type recombinase/integrase | no data | 25 | 70 |
| Dinoroseobacter shibae DFL-12 | Dshi_1611 | | integrase family protein (RefSeq) | strong | 33 | 57 |
| Dickeya dianthicola 67-19 | HGI48_RS03440 | | site-specific tyrosine recombinase XerD | insig. | 32 | 54 |
| Dickeya dianthicola ME23 | DZA65_RS03485 | | site-specific tyrosine recombinase XerD | no data | 32 | 54 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS05140 | | site-specific tyrosine recombinase XerD | insig. | 31 | 71 |
| Ralstonia solanacearum UW163 | UW163_RS08485 | | site-specific tyrosine recombinase XerD | insig. | 31 | 71 |
| Alteromonas macleodii MIT1002 | MIT1002_00786 | | Tyrosine recombinase XerD | insig. | 29 | 70 |
| Agrobacterium fabrum C58 | Atu2628 | | site-specific recombinase | no data | 27 | 86 |
| Rahnella sp. WP5 | EX31_RS13480 | | site-specific tyrosine recombinase XerD | strong | 33 | 54 |
| Serratia liquefaciens MT49 | IAI46_20730 | | site-specific tyrosine recombinase XerD | insig. | 29 | 88 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_842 | | Tyrosine recombinase XerC | sig. | 26 | 89 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2171 | | Tyrosine recombinase XerC | insig. | 26 | 89 |
| Ralstonia solanacearum GMI1000 | RS_RS17610 | | recombinase XerC | insig. | 34 | 54 |
| Enterobacter sp. TBS_079 | MPMX20_03753 | | Tyrosine recombinase XerD | strong | 32 | 47 |
| Enterobacter asburiae PDN3 | EX28DRAFT_2945 | | tyrosine recombinase XerD | insig. | 32 | 47 |
| Pantoea sp. MT58 | IAI47_03820 | | site-specific tyrosine recombinase XerD | strong | 32 | 47 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS03345 | | recombinase XerD | sig. | 32 | 51 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_12725 | | recombinase XerC | strong | 26 | 89 |
| Escherichia coli ECRC102 | NIAGMN_17335 | xerD | site-specific tyrosine recombinase XerD | no data | 32 | 47 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0827 | | Site-specific recombinase XerD | insig. | 27 | 73 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_12250 | | site-specific tyrosine recombinase XerD | strong | 31 | 54 |
| Burkholderia phytofirmans PsJN | BPHYT_RS01655 | | tyrosine recombinase XerC | no data | 28 | 90 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_00850 | | site-specific tyrosine recombinase XerD | no data | 25 | 88 |
| Pseudomonas stutzeri RCH2 | Psest_3767 | | tyrosine recombinase XerC | strong | 34 | 49 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2991 | | Tyrosine recombinase XerD | cofit | 31 | 54 |
| Ralstonia solanacearum GMI1000 | RS_RS12755 | | tyrosine recombinase XerD | no data | 30 | 71 |
| Ralstonia solanacearum PSI07 | RPSI07_RS12160 | | site-specific tyrosine recombinase XerD | insig. | 34 | 54 |
| Ralstonia solanacearum UW163 | UW163_RS23220 | | recombinase XerC | insig. | 33 | 54 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00821 | | Tyrosine recombinase XerD | sig. | 31 | 47 |
| Escherichia coli BL21 | ECD_02726 | | site-specific tyrosine recombinase | strong | 31 | 54 |
| Escherichia fergusonii Becca | EFB2_01007 | | Tyrosine recombinase XerD | strong | 31 | 54 |
| Escherichia coli ECOR27 | NOLOHH_11495 | xerD | site-specific tyrosine recombinase XerD | no data | 31 | 54 |
| Escherichia coli ECRC101 | OKFHMN_19570 | xerD | site-specific tyrosine recombinase XerD | no data | 31 | 54 |
| Escherichia coli ECRC101 | MCAODC_10090 | xerD | site-specific tyrosine recombinase XerD | no data | 31 | 54 |
| Escherichia coli ECRC62 | BNILDI_10025 | xerD | site-specific tyrosine recombinase XerD | insig. | 31 | 54 |
| Escherichia coli ECRC98 | JDDGAC_23210 | xerD | site-specific tyrosine recombinase XerD | no data | 31 | 54 |
| Escherichia coli ECRC99 | KEDOAH_08570 | xerD | site-specific tyrosine recombinase XerD | no data | 31 | 54 |
| Escherichia coli Nissle 1917 | ECOLIN_RS16125 | | site-specific tyrosine recombinase XerD | cofit | 31 | 54 |
| Escherichia coli BW25113 | b2894 | xerD | site-specific tyrosine recombinase XerD (NCBI) | strong | 31 | 54 |
| Marinobacter adhaerens HP15 | HP15_250 | | site-specific tyrosine recombinase XerC | strong | 27 | 85 |
| Shewanella oneidensis MR-1 | SO0950 | xerD | integrase/recombinase XerD (NCBI ptt file) | strong | 27 | 76 |
| Azospirillum sp. SherDot2 | MPMX19_02643 | | Tyrosine recombinase XerD | no data | 27 | 70 |
| Dickeya dianthicola 67-19 | HGI48_RS20045 | | tyrosine recombinase XerC | strong | 25 | 89 |
| Dickeya dianthicola ME23 | DZA65_RS21090 | | tyrosine recombinase XerC | insig. | 25 | 89 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS16135 | | site-specific integrase | insig. | 25 | 92 |
| Escherichia coli ECOR38 | HEPCGN_18860 | xerD | site-specific tyrosine recombinase XerD | cofit | 31 | 47 |
| Ralstonia solanacearum PSI07 | RPSI07_RS23690 | | tyrosine recombinase XerC | insig. | 27 | 85 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_1244 | | Site-specific recombinase XerD | no data | 25 | 94 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_1749 | | Site-specific recombinase XerD | no data | 25 | 94 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_1789 | | Site-specific recombinase XerD | no data | 25 | 94 |
| Klebsiella michiganensis M5al | BWI76_RS23815 | | site-specific tyrosine recombinase XerD | no data | 31 | 54 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS19225 | | site-specific tyrosine recombinase XerD | strong | 31 | 49 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS09520 | | site-specific tyrosine recombinase XerD | sig. | 30 | 51 |