Homologs of SO3783 from Shewanella oneidensis MR-1

ATP-dependent RNA helicase, DEAD box family (NCBI ptt file)
SEED: ATP-dependent RNA helicase RhlE
KEGG: ATP-dependent RNA helicase RhlE

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO3783 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_0810 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 76 97
o Shewanella loihica PV-4 Shew_0604 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 69 86
o Shewanella amazonensis SB2B Sama_2687 DEAD-box ATP dependent DNA helicase (RefSeq) insig. 58 99
o Marinobacter adhaerens HP15 HP15_3607 DEAD/DEAH box helicase domain protein insig. 66 81
o Vibrio cholerae E7946 ATCC 55056 CSW01_15010 ATP-dependent RNA helicase RhlE insig. 71 72
o Alteromonas macleodii MIT1002 MIT1002_03342 ATP-dependent RNA helicase RhlE insig. 57 89
o Rahnella sp. WP5 EX31_RS23775 ATP-dependent RNA helicase RhlE insig. 59 87
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_19640 rhlE ATP-dependent RNA helicase RhlE cofit 58 91
o Paraburkholderia graminis OAS925 ABIE53_003462 ATP-dependent RNA helicase RhlE sig. 55 95
o Erwinia tracheiphila SCR3 LU632_RS09215 rhlE ATP-dependent RNA helicase RhlE cofit 57 91
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04222 ATP-dependent RNA helicase RhlE sig. 56 95
o Dickeya dianthicola ME23 DZA65_RS09075 ATP-dependent RNA helicase RhlE insig. 59 85
o Pantoea sp. MT58 IAI47_13435 ATP-dependent RNA helicase RhlE insig. 69 70
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS03875 ATP-dependent RNA helicase RhlE cofit 69 70
  Enterobacter asburiae PDN3 EX28DRAFT_2194 Superfamily II DNA and RNA helicases insig. 68 70
o Dickeya dianthicola 67-19 HGI48_RS08785 ATP-dependent RNA helicase RhlE cofit 59 85
o Paraburkholderia sabiae LMG 24235 QEN71_RS02265 DEAD/DEAH box helicase strong 68 70
o Burkholderia phytofirmans PsJN BPHYT_RS16445 RNA helicase strong 55 97
o Erwinia amylovora T8 OLJFJH_16685 ATP-dependent RNA helicase RhlE cofit 57 88
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF696 ATP-dependent RNA helicase RhlE insig. 67 70
o Pectobacterium carotovorum WPP14 HER17_RS13325 ATP-dependent RNA helicase RhlE insig. 67 70
  Cupriavidus basilensis FW507-4G11 RR42_RS02870 RNA helicase sig. 65 71
o Escherichia fergusonii Becca EFB2_03308 ATP-dependent RNA helicase RhlE insig. 67 70
  Escherichia coli ECOR38 HEPCGN_01750 rhlE ATP-dependent RNA helicase RhlE insig. 67 70
  Escherichia coli Nissle 1917 ECOLIN_RS04245 ATP-dependent RNA helicase RhlE insig. 67 70
o Escherichia coli BL21 ECD_00764 ATP-dependent RNA helicase insig. 67 70
o Escherichia coli ECOR27 NOLOHH_22645 rhlE ATP-dependent RNA helicase RhlE insig. 67 70
o Escherichia coli ECRC100 OKFHMN_06290 rhlE ATP-dependent RNA helicase RhlE cofit 67 70
o Escherichia coli ECRC101 MCAODC_25505 rhlE ATP-dependent RNA helicase RhlE insig. 67 70
o Escherichia coli ECRC102 NIAGMN_04335 rhlE ATP-dependent RNA helicase RhlE cofit 67 70
o Escherichia coli ECRC62 BNILDI_20925 rhlE ATP-dependent RNA helicase RhlE insig. 67 70
o Escherichia coli ECRC98 JDDGAC_09925 rhlE ATP-dependent RNA helicase RhlE sig. 67 70
o Escherichia coli ECRC99 KEDOAH_21620 rhlE ATP-dependent RNA helicase RhlE no data 67 70
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02916 ATP-dependent RNA helicase RhlE insig. 67 70
o Escherichia coli BW25113 b0797 rhlE RNA helicase (NCBI) sig. 67 70
o Serratia liquefaciens MT49 IAI46_06620 ATP-dependent RNA helicase RhlE cofit 67 70
o Dickeya dadantii 3937 DDA3937_RS08645 ATP-dependent RNA helicase RhlE sig. 66 70
o Klebsiella michiganensis M5al BWI76_RS08915 ATP-dependent RNA helicase RhlE sig. 67 70
o Klebsiella pneumoniae MKP103 KDGMDA_17180 ATP-dependent RNA helicase RhlE sig. 67 70
  Enterobacter sp. TBS_079 MPMX20_01425 ATP-dependent RNA helicase RhlE insig. 66 70
o Ralstonia sp. UNC404CL21Col ABZR87_RS07850 DEAD/DEAH box helicase sig. 66 70
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS11875 RNA helicase strong 66 70
o Ralstonia solanacearum UW163 UW163_RS01715 RNA helicase insig. 66 70
o Methylophilus sp. DMC18 GFF250 ATP-dependent RNA helicase RhlE insig. 57 85
o Ralstonia solanacearum PSI07 RPSI07_RS21325 RNA helicase sig. 61 79
o Herbaspirillum seropedicae SmR1 HSERO_RS08565 RNA helicase insig. 66 70
o Ralstonia solanacearum GMI1000 RS_RS02695 RNA helicase sig. 62 78
o Castellaniella sp019104865 MT123 ABCV34_RS12515 DEAD/DEAH box helicase cofit 56 87
  Variovorax sp. OAS795 ABID97_RS21170 DEAD/DEAH box helicase sig. 63 70
o Pseudomonas stutzeri RCH2 Psest_3505 Superfamily II DNA and RNA helicases strong 61 73
  Acidovorax sp. GW101-3H11 Ac3H11_386 ATP-dependent RNA helicase RhlE insig. 61 70
  Variovorax sp. SCN45 GFF6779 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) insig. 62 70
  Pseudomonas aeruginosa MRSN321 DY961_RS22125 DEAD/DEAH box helicase strong 54 88
  Pseudomonas aeruginosa PA14 IKLFDK_23280 DEAD/DEAH box helicase strong 54 88
  Pseudomonas aeruginosa PUPa3 DQ20_RS37180 DEAD/DEAH box helicase strong 54 88
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3530 ATP-dependent RNA helicase RhlE cofit 58 77
  Pseudomonas segetis P6 ACVTMO_RS05445 DEAD/DEAH box helicase sig. 60 72
  Pseudomonas stutzeri RCH2 Psest_0312 Superfamily II DNA and RNA helicases strong 62 70
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2736 ATP-dependent RNA helicase PA3950 sig. 60 72
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1409 ATP-dependent RNA helicase PA3950 insig. 60 72
  Kangiella aquimarina DSM 16071 B158DRAFT_0320 Superfamily II DNA and RNA helicases insig. 61 72
  Pseudomonas fluorescens FW300-N2E3 AO353_06265 DEAD/DEAH box helicase strong 59 72
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5046 ATP-dependent RNA helicase PA3950 strong 59 72
  Pseudomonas sp. DMC3 GFF3924 ATP-dependent RNA helicase RhlE cofit 59 72
  Pseudomonas sp. SVBP6 COO64_RS15390 DEAD/DEAH box helicase insig. 58 73
  Pseudomonas aeruginosa PA14 IKLFDK_20375 DEAD/DEAH box helicase sig. 60 72
  Pseudomonas aeruginosa PUPa3 DQ20_RS48430 DEAD/DEAH box helicase sig. 60 72
  Pseudomonas fluorescens FW300-N2C3 AO356_15530 DEAD/DEAH box helicase sig. 59 72
  Pseudomonas sp. S08-1 OH686_16620 ATP-dependent RNA helicase insig. 56 79
  Pseudomonas sp. DMC3 GFF174 ATP-dependent RNA helicase RhlE cofit 61 70
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05046 ATP-dependent RNA helicase RhlE cofit 58 72
  Pseudomonas aeruginosa MRSN321 DY961_RS13105 DEAD/DEAH box helicase insig. 60 72
o Dechlorosoma suillum PS Dsui_3174 DNA/RNA helicase, superfamily II insig. 59 70
  Pseudomonas syringae pv. syringae B728a Psyr_4297 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 59 72
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4297 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal strong 59 72
  Pseudomonas sp. RS175 PFR28_03825 ATP-dependent RNA helicase RhlE insig. 59 72
  Pseudomonas orientalis W4I3 QF045_RS26765 DEAD/DEAH box helicase insig. 58 72
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1048 ATP-dependent RNA helicase RhlE sig. 61 70
  Pseudomonas fluorescens FW300-N2E3 AO353_08030 DEAD/DEAH box helicase sig. 61 70
  Pseudomonas fluorescens SBW25 PFLU_RS26425 DEAD/DEAH box helicase insig. 59 72
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26425 DEAD/DEAH box helicase sig. 59 72
  Pseudomonas putida KT2440 PP_4980 ATP-dependent RNA helicase sig. 54 83
  Pseudomonas sp. RS175 PFR28_04204 ATP-dependent RNA helicase RhlE sig. 61 70
  Pseudomonas sp. BP01 JOY50_RS09795 DEAD/DEAH box helicase insig. 58 78
  Pseudomonas sp. SVBP6 COO64_RS17470 DEAD/DEAH box helicase insig. 57 80
  Pseudomonas simiae WCS417 PS417_24500 DEAD/DEAH box helicase strong 58 72
  Pseudomonas fluorescens FW300-N2C3 AO356_13590 DEAD/DEAH box helicase sig. 61 70
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4635 ATP-dependent RNA helicase RhlE strong 61 70
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2382 ATP-dependent RNA helicase RhlE sig. 61 70
  Pseudomonas sp. S08-1 OH686_10835 ATP-dependent RNA helicase RhlE cofit 61 70
  Pseudomonas simiae WCS417 PS417_26525 DEAD/DEAH box helicase strong 61 70
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05436 ATP-dependent RNA helicase RhlE cofit 61 70
  Dechlorosoma suillum PS Dsui_0309 DNA/RNA helicase, superfamily II insig. 60 72
  Pseudomonas fluorescens SBW25 PFLU_RS28180 DEAD/DEAH box helicase cofit 61 70
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28180 DEAD/DEAH box helicase sig. 61 70
  Pseudomonas orientalis W4I3 QF045_RS00920 DEAD/DEAH box helicase cofit 60 70
  Paraburkholderia graminis OAS925 ABIE53_005853 ATP-dependent RNA helicase RhlE insig. 59 72
  Pseudomonas sp. BP01 JOY50_RS21825 DEAD/DEAH box helicase insig. 58 72
  Pseudomonas segetis P6 ACVTMO_RS03195 DEAD/DEAH box helicase strong 60 70