Homologs of SO3125 from Shewanella oneidensis MR-1

ATP-dependent RNA helicase, DEAD box family (NCBI ptt file)
SEED: ATP-dependent RNA helicase VF1437

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO3125 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_1422 4a-hydroxytetrahydrobiopterin dehydratase (RefSeq) no data 94 100
o Shewanella loihica PV-4 Shew_1454 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 69 99
  Paraburkholderia graminis OAS925 ABIE53_005853 ATP-dependent RNA helicase RhlE insig. 53 89
  Burkholderia phytofirmans PsJN BPHYT_RS35415 DEAD/DEAH box helicase insig. 53 89
  Pseudomonas sp. SVBP6 COO64_RS15390 DEAD/DEAH box helicase insig. 50 90
  Marinobacter adhaerens HP15 HP15_3607 DEAD/DEAH box helicase domain protein insig. 50 92
  Paraburkholderia sabiae LMG 24235 QEN71_RS32150 DEAD/DEAH box helicase insig. 51 89
o Acidovorax sp. GW101-3H11 Ac3H11_1026 ATP-dependent RNA helicase RhlE insig. 51 95
o Variovorax sp. SCN45 GFF5016 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) insig. 54 95
  Pseudomonas sp. RS175 PFR28_03825 ATP-dependent RNA helicase RhlE insig. 50 89
  Pseudomonas sp. DMC3 GFF3924 ATP-dependent RNA helicase RhlE cofit 49 89
  Shewanella sp. ANA-3 Shewana3_0810 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 50 90
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1409 ATP-dependent RNA helicase PA3950 insig. 50 89
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5046 ATP-dependent RNA helicase PA3950 strong 50 89
  Pseudomonas sp. BP01 JOY50_RS21825 DEAD/DEAH box helicase insig. 50 90
  Pseudomonas fluorescens SBW25 PFLU_RS26425 DEAD/DEAH box helicase insig. 49 89
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26425 DEAD/DEAH box helicase sig. 49 89
  Paraburkholderia sabiae LMG 24235 QEN71_RS02265 DEAD/DEAH box helicase strong 50 93
  Pseudomonas fluorescens FW300-N2C3 AO356_15530 DEAD/DEAH box helicase sig. 49 89
  Shewanella oneidensis MR-1 SO3783 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 49 92
  Dechlorosoma suillum PS Dsui_0309 DNA/RNA helicase, superfamily II insig. 50 89
  Kangiella aquimarina DSM 16071 B158DRAFT_0320 Superfamily II DNA and RNA helicases insig. 49 89
  Paraburkholderia graminis OAS925 ABIE53_003462 ATP-dependent RNA helicase RhlE sig. 49 93
  Pseudomonas syringae pv. syringae B728a Psyr_4297 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 50 89
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4297 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal strong 50 89
  Dickeya dianthicola 67-19 HGI48_RS08785 ATP-dependent RNA helicase RhlE cofit 49 90
  Dickeya dianthicola ME23 DZA65_RS09075 ATP-dependent RNA helicase RhlE insig. 49 90
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2736 ATP-dependent RNA helicase PA3950 sig. 49 89
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04222 ATP-dependent RNA helicase RhlE sig. 49 93
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05046 ATP-dependent RNA helicase RhlE cofit 49 89
  Pseudomonas fluorescens FW300-N2E3 AO353_06265 DEAD/DEAH box helicase strong 49 89
  Pseudomonas putida KT2440 PP_4766 ATP-dependent RNA helicase strong 49 90
  Erwinia tracheiphila SCR3 LU632_RS09215 rhlE ATP-dependent RNA helicase RhlE cofit 48 94
  Escherichia coli BL21 ECD_00764 ATP-dependent RNA helicase insig. 49 90
  Escherichia coli ECOR27 NOLOHH_22645 rhlE ATP-dependent RNA helicase RhlE insig. 49 90
  Escherichia coli ECRC100 OKFHMN_06290 rhlE ATP-dependent RNA helicase RhlE cofit 49 90
  Escherichia coli ECRC101 MCAODC_25505 rhlE ATP-dependent RNA helicase RhlE insig. 49 90
  Escherichia coli ECRC102 NIAGMN_04335 rhlE ATP-dependent RNA helicase RhlE cofit 49 90
  Escherichia coli ECRC62 BNILDI_20925 rhlE ATP-dependent RNA helicase RhlE insig. 49 90
  Escherichia coli ECRC98 JDDGAC_09925 rhlE ATP-dependent RNA helicase RhlE sig. 49 90
  Escherichia coli ECRC99 KEDOAH_21620 rhlE ATP-dependent RNA helicase RhlE no data 49 90
  Escherichia coli BW25113 b0797 rhlE RNA helicase (NCBI) sig. 49 90
o Variovorax sp. OAS795 ABID97_RS04130 DEAD/DEAH box helicase cofit 55 88
  Escherichia fergusonii Becca EFB2_03308 ATP-dependent RNA helicase RhlE insig. 49 90
  Escherichia coli Nissle 1917 ECOLIN_RS04245 ATP-dependent RNA helicase RhlE insig. 49 90
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02916 ATP-dependent RNA helicase RhlE insig. 49 90
  Enterobacter sp. TBS_079 MPMX20_01425 ATP-dependent RNA helicase RhlE insig. 49 90
  Pseudomonas stutzeri RCH2 Psest_3505 Superfamily II DNA and RNA helicases strong 50 91
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_19640 rhlE ATP-dependent RNA helicase RhlE cofit 49 92
  Burkholderia phytofirmans PsJN BPHYT_RS16445 RNA helicase strong 49 93
  Cupriavidus basilensis FW507-4G11 RR42_RS02870 RNA helicase sig. 48 90
  Escherichia coli ECOR38 HEPCGN_01750 rhlE ATP-dependent RNA helicase RhlE insig. 49 90
  Pseudomonas sp. S08-1 OH686_16620 ATP-dependent RNA helicase insig. 51 89
  Pseudomonas simiae WCS417 PS417_24500 DEAD/DEAH box helicase strong 49 89
  Enterobacter asburiae PDN3 EX28DRAFT_2194 Superfamily II DNA and RNA helicases insig. 48 90
  Methylophilus sp. DMC18 GFF250 ATP-dependent RNA helicase RhlE insig. 48 96
  Ralstonia solanacearum PSI07 RPSI07_RS21325 RNA helicase sig. 47 95
  Pseudomonas aeruginosa PA14 IKLFDK_20375 DEAD/DEAH box helicase insig. 49 89
  Shewanella loihica PV-4 Shew_0604 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 48 89
  Klebsiella pneumoniae MKP103 KDGMDA_17180 ATP-dependent RNA helicase RhlE sig. 49 90
  Dickeya dadantii 3937 DDA3937_RS08645 ATP-dependent RNA helicase RhlE sig. 49 90
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF696 ATP-dependent RNA helicase RhlE insig. 48 90
  Pseudomonas segetis P6 MPMX49_01098 ATP-dependent RNA helicase RhlE sig. 48 90
  Erwinia amylovora T8 OLJFJH_16685 ATP-dependent RNA helicase RhlE cofit 49 90
  Serratia liquefaciens MT49 IAI46_06620 ATP-dependent RNA helicase RhlE insig. 48 90
  Alteromonas macleodii MIT1002 MIT1002_03342 ATP-dependent RNA helicase RhlE insig. 47 91
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11875 RNA helicase strong 48 92
  Ralstonia solanacearum UW163 UW163_RS01715 RNA helicase insig. 48 92
  Klebsiella michiganensis M5al BWI76_RS08915 ATP-dependent RNA helicase RhlE sig. 48 90
  Ralstonia solanacearum GMI1000 RS_RS02695 RNA helicase sig. 46 96
  Pantoea sp. MT58 IAI47_13435 ATP-dependent RNA helicase RhlE insig. 48 90
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS03875 ATP-dependent RNA helicase RhlE cofit 48 90
  Pectobacterium carotovorum WPP14 HER17_RS13325 ATP-dependent RNA helicase RhlE insig. 49 90
  Ralstonia sp. UNC404CL21Col ABZR87_RS07850 DEAD/DEAH box helicase sig. 48 90
  Vibrio cholerae E7946 ATCC 55056 CSW01_15010 ATP-dependent RNA helicase RhlE insig. 47 89
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4937 ATP-dependent RNA helicase RhlE insig. 52 84
  Herbaspirillum seropedicae SmR1 HSERO_RS08565 RNA helicase insig. 48 93
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3530 ATP-dependent RNA helicase RhlE cofit 47 94
  Rahnella sp. WP5 EX31_RS23775 ATP-dependent RNA helicase RhlE insig. 47 90
  Shewanella oneidensis MR-1 SO3388 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 47 94
  Vibrio cholerae E7946 ATCC 55056 CSW01_18020 DEAD/DEAH box helicase cofit 46 95
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.562.1 ATP-dependent RNA helicase RhlE insig. 49 85
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00855 RNA helicase sig. 49 90
  Shewanella amazonensis SB2B Sama_2687 DEAD-box ATP dependent DNA helicase (RefSeq) insig. 46 94
  Shewanella sp. ANA-3 Shewana3_1162 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 46 94
  Pseudomonas simiae WCS417 PS417_26525 DEAD/DEAH box helicase strong 48 92
  Shewanella amazonensis SB2B Sama_0383 ATP-dependent RNA helicase RhlE (RefSeq) insig. 44 96
  Dechlorosoma suillum PS Dsui_3174 DNA/RNA helicase, superfamily II insig. 47 89
  Pseudomonas sp. SVBP6 COO64_RS17470 DEAD/DEAH box helicase insig. 46 98
  Pseudomonas fluorescens SBW25 PFLU_RS28180 DEAD/DEAH box helicase cofit 48 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28180 DEAD/DEAH box helicase sig. 48 92
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05436 ATP-dependent RNA helicase RhlE cofit 48 92
  Shewanella sp. ANA-3 Shewana3_2376 DEAD/DEAH box helicase domain-containing protein (RefSeq) cofit 43 93
  Pseudomonas aeruginosa PA14 IKLFDK_23280 DEAD/DEAH box helicase cofit 46 95
  Pseudomonas sp. DMC3 GFF174 ATP-dependent RNA helicase RhlE cofit 48 92
  Pseudomonas sp. S08-1 OH686_10835 ATP-dependent RNA helicase RhlE cofit 48 93
  Variovorax sp. OAS795 ABID97_RS21170 DEAD/DEAH box helicase sig. 48 88
  Pseudomonas sp. BP01 JOY50_RS09795 DEAD/DEAH box helicase insig. 48 94
  Pseudomonas fluorescens FW300-N2E3 AO353_08030 DEAD/DEAH box helicase sig. 48 92