Homologs of SO2594 from Shewanella oneidensis MR-1

conserved hypothetical protein (NCBI ptt file)
SEED: FIG005548: transport protein

116 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO2594 conserved hypothetical protein (NCBI ptt file) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_1784 hypothetical protein (RefSeq) sig. 96 100
o Shewanella loihica PV-4 Shew_1808 hypothetical protein (RefSeq) insig. 83 100
o Shewanella amazonensis SB2B Sama_1591 adhesin-associated MmpL efflux pump (from data) cofit 83 99
o Alteromonas macleodii MIT1002 MIT1002_02033 efflux transporter, putative, hydrophobe/amphiphile efflux-3 (HAE3) family cofit 66 98
o Kangiella aquimarina DSM 16071 B158DRAFT_0997 adhesin-associated MmpL efflux pump (from data) insig. 55 97
o Pseudomonas stutzeri RCH2 Psest_1924 adhesin-associated MmpL efflux pump (from data) strong 50 99
o Pseudomonas sp. BP01 JOY50_RS16460 RND family transporter insig. 47 98
o Pseudomonas aeruginosa MRSN321 DY961_RS01550 RND family transporter strong 48 98
o Pseudomonas aeruginosa PUPa3 DQ20_RS34010 RND family transporter cofit 48 98
o Pseudomonas aeruginosa PA14 IKLFDK_15655 RND transporter insig. 48 98
o Pseudomonas sp. SVBP6 COO64_RS05480 MMPL family transporter insig. 48 98
o Pseudomonas putida KT2440 PP_2019 adhesin-associated MmpL efflux pump (from data) strong 47 98
o Pseudomonas segetis P6 ACVTMO_RS15050 efflux RND transporter permease subunit cofit 47 99
o Pseudomonas fluorescens FW300-N2C3 AO356_24570 RND transporter insig. 47 98
o Pseudomonas protegens RBAN4 FABNJH_16795 SSD domain-containing protein insig. 47 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_606 FIG005548: transport protein strong 47 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3322 FIG005548: transport protein cofit 46 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4616 FIG005548: transport protein strong 46 98
o Pseudomonas fluorescens SBW25 PFLU_RS17170 RND family transporter insig. 47 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS17170 RND family transporter sig. 47 98
o Pseudomonas sp. RS175 PFR28_01576 hypothetical protein strong 46 98
o Pseudomonas fluorescens FW300-N2E3 AO353_23640 RND transporter insig. 46 98
o Pseudomonas syringae pv. syringae B728a Psyr_1701 membrane protein, putative insig. 46 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1701 membrane protein, putative insig. 46 99
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS10615 MMPL family transporter insig. 46 100
o Pseudomonas sp. DMC3 GFF3038 hypothetical protein cofit 46 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03332 hypothetical protein insig. 46 98
o Pseudomonas simiae WCS417 PS417_15155 RND transporter insig. 46 98
o Pseudomonas orientalis W4I3 QF045_RS14365 RND family transporter cofit 46 98
o Pseudomonas sp. S08-1 OH686_04240 Exporter protein, RND family strong 47 98
o Marinobacter adhaerens HP15 HP15_1068 transporter strong 45 99
  Pseudomonas fluorescens FW300-N2C3 AO356_29135 RND transporter insig. 42 98
  Pseudomonas segetis P6 ACVTMO_RS03955 efflux RND transporter permease subunit insig. 45 97
  Pseudomonas fluorescens FW300-N2C3 AO356_29940 RND transporter insig. 43 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5984 FIG005548: transport protein insig. 42 99
  Pseudomonas sp. SVBP6 COO64_RS23565 RND family transporter insig. 43 98
o Variovorax sp. OAS795 ABID97_RS13515 MMPL family transporter insig. 44 98
o Cupriavidus basilensis FW507-4G11 RR42_RS31880 transporter insig. 44 96
  Pseudomonas putida KT2440 PP_3202 putative Transporter sig. 43 98
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4892 FIG005548: transport protein cofit 42 99
  Pseudomonas fluorescens FW300-N2E3 AO353_21060 RND transporter sig. 41 99
  Pseudomonas sp. RS175 PFR28_01991 hypothetical protein insig. 43 98
  Pseudomonas sp. BP01 JOY50_RS13815 RND family transporter no data 43 95
  Pseudomonas sp. BP01 JOY50_RS25345 RND family transporter insig. 42 98
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3429 FIG005548: transport protein insig. 41 98
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1365 FIG005548: transport protein insig. 43 97
  Pseudomonas fluorescens FW300-N2C3 AO356_27940 RND transporter insig. 44 97
  Marinobacter adhaerens HP15 HP15_10 transporter insig. 40 98
  Cupriavidus basilensis FW507-4G11 RR42_RS24590 RND transporter insig. 41 100
  Pseudomonas aeruginosa MRSN321 DY961_RS17475 efflux RND transporter permease subunit insig. 41 98
  Pseudomonas aeruginosa PUPa3 DQ20_RS39710 efflux RND transporter permease subunit insig. 41 98
o Herbaspirillum seropedicae SmR1 HSERO_RS17610 RND transporter insig. 41 99
  Herbaspirillum seropedicae SmR1 HSERO_RS19670 RND transporter insig. 40 99
  Pseudomonas putida KT2440 PP_2812 putative Transporter insig. 40 98
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1845 FIG005548: transport protein insig. 40 98
o Acidovorax sp. GW101-3H11 Ac3H11_2777 FIG005548: transport protein insig. 39 98
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS10300 MMPL family transporter insig. 29 99
  Rhodanobacter denitrificans MT42 LRK55_RS07140 efflux RND transporter permease subunit cofit 27 98
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07410 efflux RND transporter permease subunit insig. 27 98
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS16410 efflux RND transporter permease subunit insig. 27 98
  Marinobacter adhaerens HP15 HP15_4021 exporters of the RND superfamily insig. 27 99
  Alteromonas macleodii MIT1002 MIT1002_02084 transport protein insig. 27 100
  Marinobacter adhaerens HP15 HP15_2606 transporter insig. 26 100
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5597 FIG005548: transport protein insig. 41 38
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17320 hypothetical protein strong 23 99
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05460 hypothetical protein insig. 23 96
  Pseudomonas sp. BP01 JOY50_RS08540 outer membrane lipoprotein-sorting protein insig. 21 97
  Cellulophaga baltica 18 M666_RS07515 efflux RND transporter permease subunit strong 21 94
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4559 Predicted exporter of the RND superfamily insig. 22 76
  Pseudomonas sp. S08-1 OH686_15855 hypothetical protein cofit 21 65
  Pseudomonas putida KT2440 PP_2787 putative Transporter insig. 21 76
  Cellulophaga baltica 18 M666_RS18535 MMPL family transporter insig. 21 95
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17440 Fis family transcriptional regulator strong 23 34
  Methanococcus maripaludis JJ MMJJ_RS09095 MMPL family transporter strong 24 49
  Methanococcus maripaludis S2 MMP_RS05285 MMPL family transporter strong 24 49
  Methanococcus maripaludis JJ MMJJ_RS09095 MMPL family transporter strong 23 49
  Methanococcus maripaludis S2 MMP_RS05285 MMPL family transporter strong 22 49
  Rhodopseudomonas palustris CGA009 TX73_019400 MMPL family transporter insig. 21 96
  Alteromonas macleodii MIT1002 MIT1002_03866 efflux transporter, putative, hydrophobe/amphiphile efflux-3 (HAE3) family insig. 20 47
  Kangiella aquimarina DSM 16071 B158DRAFT_0350 Predicted exporters of the RND superfamily insig. 21 46
  Pseudomonas stutzeri RCH2 Psest_1244 protein-export membrane protein, SecD/SecF family no data 26 20
  Kangiella aquimarina DSM 16071 B158DRAFT_2257 Predicted exporters of the RND superfamily strong 19 81
  Marinobacter adhaerens HP15 HP15_638 integral membrane protein cofit 26 20
  Ralstonia solanacearum PSI07 RPSI07_RS02515 AcrB/AcrD/AcrF family protein insig. 30 29
  Ralstonia solanacearum GMI1000 RS_RS20330 AcrB/AcrD/AcrF family protein insig. 36 18
  Pantoea sp. MT58 IAI47_16895 efflux RND transporter permease subunit insig. 23 24
  Serratia liquefaciens MT49 IAI46_18980 multidrug efflux RND transporter permease subunit MdtC insig. 24 20
  Rahnella sp. WP5 EX31_RS13380 MMPL family transporter insig. 21 26
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS17115 efflux RND transporter permease subunit insig. 22 21
  Ralstonia sp. UNC404CL21Col ABZR87_RS20905 efflux RND transporter permease subunit insig. 34 18
  Pseudomonas fluorescens SBW25 PFLU_RS13435 MMPL family transporter insig. 26 29
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13435 MMPL family transporter insig. 26 29
  Alteromonas macleodii MIT1002 MIT1002_03866 efflux transporter, putative, hydrophobe/amphiphile efflux-3 (HAE3) family insig. 21 35
  Synechocystis sp000284455 PCC 6803 SGL_RS16065 CusA/CzcA family heavy metal efflux RND transporter strong 26 21
  Erwinia amylovora T8 OLJFJH_08990 multidrug transporter subunit MdtC insig. 22 20
  Mycobacterium tuberculosis H37Rv Rv0450c Probable conserved transmembrane transport protein MmpL4 strong 25 22
  Rhodospirillum rubrum S1H Rru_A0057 hypothetical protein (NCBI) no data 25 19
  Pseudomonas syringae pv. syringae B728a Psyr_1230 SecD/SecF/SecDF export membrane protein:SecD export membrane protein no data 25 20
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1230 SecD/SecF/SecDF export membrane protein:SecD export membrane protein no data 25 20
  Pseudomonas putida KT2440 PP_2787 putative Transporter insig. 28 19
  Rhizobium sp. OAE497 ABIE40_RS11655 efflux RND transporter permease subunit insig. 26 20
  Pectobacterium carotovorum WPP14 HER17_RS06315 multidrug efflux RND transporter permease subunit MdtC cofit 24 21
  Herbaspirillum seropedicae SmR1 HSERO_RS12415 acriflavine resistance protein B insig. 23 22
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06491 multidrug efflux pump insig. 23 19
  Paraburkholderia graminis OAS925 ABIE53_001782 multidrug efflux pump strong 23 19
  Paraburkholderia sabiae LMG 24235 QEN71_RS23310 efflux RND transporter permease subunit cofit 23 19
  Pseudomonas aeruginosa MRSN321 DY961_RS13815 secD;go_component=cell protein translocase subunit SecD no data 30 14
  Pseudomonas aeruginosa PUPa3 DQ20_RS43285 secD;go_component=cell protein translocase subunit SecD no data 30 14
  Pseudomonas sp. SVBP6 COO64_RS03860 secD protein translocase subunit SecD no data 29 14
  Herbaspirillum seropedicae SmR1 HSERO_RS07655 nodulation protein insig. 23 24
  Pseudomonas aeruginosa PA14 IKLFDK_19675 Protein translocase subunit SecD no data 30 14
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17650 acriflavin resistance protein insig. 26 18
  Variovorax sp. SCN45 GFF5811 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB-like insig. 25 20
  Mycobacterium tuberculosis H37Rv Rv2339 Probable conserved transmembrane transport protein MmpL9 insig. 22 31
  Rhodopseudomonas palustris CGA009 TX73_024325 efflux RND transporter permease subunit insig. 27 36