Conservation of cofitness between TX73_015860 and TX73_000095 in Rhodopseudomonas palustris CGA009

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_015860 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA 1.0 TX73_000095 cytochrome-c oxidase, cbb3-type subunit II 0.50 12
Bosea sp. OAE506 0.67 ABIE41_RS17730 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA 0.75 ABIE41_RS10560 cytochrome-c oxidase, cbb3-type subunit II low > 77
Agrobacterium fabrum C58 0.62 Atu1103 rRNA-adenine N6,N6-dimethyltransferase 0.67 Atu1536 cytochrome C oxidase, FixO chain low > 89
Rhizobium sp. OAE497 0.61 ABIE40_RS06390 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA 0.67 ABIE40_RS26165 cytochrome-c oxidase, cbb3-type subunit II low > 107
Sinorhizobium meliloti 1021 0.60 SMc00579 dimethyladenosine transferase 0.69 SMa1216 cbb3-type cytochrome c oxidase subunit II low > 103
Azospirillum brasilense Sp245 0.54 AZOBR_RS16340 16S rRNA methyltransferase 0.63 AZOBR_RS01175 peptidase S41
Dinoroseobacter shibae DFL-12 0.53 Dshi_1185 dimethyladenosine transferase (RefSeq) 0.68 Dshi_0662 cytochrome c oxidase, cbb3-type, subunit II (RefSeq) low > 64
Rhodospirillum rubrum S1H 0.53 Rru_A0431 16S rRNA dimethylase (NCBI) 0.64 Rru_A3331 Cytochrome C oxidase, mono-heme subunit/FixO (NCBI)
Phaeobacter inhibens DSM 17395 0.52 PGA1_c19860 dimethyladenosine transferase KsgA 0.65 PGA1_c30110 cytochrome c oxidase subunit 2 low > 62
Azospirillum sp. SherDot2 0.50 MPMX19_01514 Ribosomal RNA small subunit methyltransferase A 0.63 MPMX19_00207 hypothetical protein
Magnetospirillum magneticum AMB-1 0.50 AMB_RS18820 dimethyladenosine transferase 0.58 AMB_RS22075 cytochrome-c oxidase, cbb3-type subunit II
Caulobacter crescentus NA1000 0.49 CCNA_01757 dimethyladenosine transferase 0.64 CCNA_01468 cytochrome cbb3 oxidase, cytochrome c subunit ccoO low > 66
Caulobacter crescentus NA1000 Δfur 0.49 CCNA_01757 dimethyladenosine transferase 0.64 CCNA_01468 cytochrome cbb3 oxidase, cytochrome c subunit ccoO low > 67
Dechlorosoma suillum PS 0.31 Dsui_0039 dimethyladenosine transferase 0.47 Dsui_1628 cytochrome c oxidase, cbb3-type, subunit II
Herbaspirillum seropedicae SmR1 0.31 HSERO_RS03540 dimethyladenosine transferase 0.45 HSERO_RS16050 peptidase S41 low > 78
Kangiella aquimarina DSM 16071 0.29 B158DRAFT_0788 dimethyladenosine transferase 0.44 B158DRAFT_1967 cytochrome c oxidase, cbb3-type, subunit II low > 40
Shewanella loihica PV-4 0.29 Shew_0879 ksgA dimethyladenosine transferase (RefSeq) 0.45 Shew_1986 cytochrome c oxidase, cbb3-type, subunit II (RefSeq)
Pseudomonas sp. S08-1 0.29 OH686_15040 ribosomal RNA small subunit methyltransferase A 0.48 OH686_02195 cytochrome c oxidase, cbb3-type, subunit II low > 80
Shewanella sp. ANA-3 0.29 Shewana3_3209 ksgA dimethyladenosine transferase (RefSeq) 0.44 Shewana3_2108 cytochrome c oxidase, cbb3-type, subunit II (RefSeq)
Shewanella amazonensis SB2B 0.29 Sama_2819 ksgA dimethyladenosine transferase (RefSeq) 0.48 Sama_1792 cytochrome c oxidase, cbb3-type, subunit II (RefSeq)
Shewanella oneidensis MR-1 0.28 SO3639 ksgA dimethyladenosine transferase (NCBI ptt file) 0.44 SO2363 ccoO cytochrome c oxidase, cbb3-type, subunit II (NCBI ptt file) low > 76
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS02785 dimethyladenosine transferase 0.44 RR42_RS12905 peptidase S41 low > 128
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS27465 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA 0.47 PFLU_RS22325 cytochrome-c oxidase, cbb3-type subunit II low > 109
Pseudomonas fluorescens SBW25 0.28 PFLU_RS27465 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA 0.47 PFLU_RS22325 cytochrome-c oxidase, cbb3-type subunit II low > 109
Pseudomonas simiae WCS417 0.28 PS417_25810 ribosomal RNA small subunit methyltransferase A 0.46 PS417_20705 cbb3-type cytochrome c oxidase subunit II
Pseudomonas putida KT2440 0.27 PP_0401 Ribosomal RNA small subunit methyltransferase A 0.47 PP_4251 cytochrome c oxidase subunit, cbb3-type low > 96
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_1200 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) 0.47 PfGW456L13_4057 Cytochrome c oxidase subunit CcoO (EC 1.9.3.1)
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_07315 rRNA methyltransferase 0.48 AO353_00590 cytochrome C oxidase Cbb3 low > 101
Marinobacter adhaerens HP15 0.27 HP15_3278 dimethyladenosine transferase 0.45 HP15_2108 cytochrome c oxidase, cbb3-type, subunit II
Ralstonia sp. UNC404CL21Col 0.27 ABZR87_RS07710 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA 0.45 ABZR87_RS11150 cytochrome-c oxidase, cbb3-type subunit II low > 80
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_2528 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) 0.47 Pf1N1B4_3883 Cytochrome c oxidase subunit CcoO (EC 1.9.3.1)
Pseudomonas sp. RS175 0.27 PFR28_04064 Ribosomal RNA small subunit methyltransferase A 0.47 PFR28_01094 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_14335 rRNA methyltransferase 0.46 AO356_02410 cytochrome C oxidase Cbb3 low > 104
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_4805 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) 0.46 Pf6N2E2_2306 Cytochrome c oxidase subunit CcoO (EC 1.9.3.1)
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_4627 dimethyladenosine transferase 0.43 Psyr_3414 Cytochrome C oxidase, mono-heme subunit/FixO
Lysobacter sp. OAE881 0.26 ABIE51_RS05385 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA 0.45 ABIE51_RS03850 cytochrome-c oxidase, cbb3-type subunit II low > 62
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_4627 dimethyladenosine transferase 0.43 Psyr_3414 Cytochrome C oxidase, mono-heme subunit/FixO
Alteromonas macleodii MIT1002 0.26 MIT1002_00781 Ribosomal RNA small subunit methyltransferase A 0.47 MIT1002_02130 cbb3-type cytochrome c oxidase subunit II 0.60 56
Acidovorax sp. GW101-3H11 0.26 Ac3H11_4327 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) 0.51 Ac3H11_969 Cytochrome c oxidase subunit CcoO (EC 1.9.3.1)
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_02325 ribosomal RNA small subunit methyltransferase A 0.45 CSW01_07225 cytochrome-c oxidase, cbb3-type subunit II
Ralstonia solanacearum UW163 0.26 UW163_RS01830 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA 0.44 UW163_RS13080 cytochrome-c oxidase, cbb3-type subunit II
Ralstonia solanacearum IBSBF1503 0.26 RALBFv3_RS11755 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA 0.44 RALBFv3_RS15620 cytochrome-c oxidase, cbb3-type subunit II low > 76
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS12305 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA 0.45 LRK54_RS17225 cytochrome-c oxidase, cbb3-type subunit II low > 59
Rhodanobacter denitrificans MT42 0.26 LRK55_RS12040 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA 0.45 LRK55_RS17450 cytochrome-c oxidase, cbb3-type subunit II low > 63
Ralstonia solanacearum GMI1000 0.25 RS_RS02580 ribosomal RNA small subunit methyltransferase A 0.44 RS_RS06400 cytochrome-c oxidase, cbb3-type subunit II low > 80
Ralstonia solanacearum PSI07 0.25 RPSI07_RS21460 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA 0.45 RPSI07_RS17735 cytochrome-c oxidase, cbb3-type subunit II low > 81
Pseudomonas stutzeri RCH2 0.25 Psest_3668 dimethyladenosine transferase 0.47 Psest_2525 cytochrome c oxidase, cbb3-type, subunit II
Variovorax sp. OAS795 0.24 ABID97_RS02525 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA 0.49 ABID97_RS16220 cytochrome-c oxidase, cbb3-type subunit II low > 91
Variovorax sp. SCN45 0.24 GFF3251 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) 0.45 GFF6963 Cytochrome c oxidase (cbb3-type) subunit CcoO (EC 1.9.3.1) low > 127
Castellaniella sp019104865 MT123 0.24 ABCV34_RS09490 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA 0.44 ABCV34_RS06865 cytochrome-c oxidase, cbb3-type subunit II
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_11625 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA 0.43 OKGIIK_07660 ccoO cytochrome-c oxidase, cbb3-type subunit II
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS11270 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA 0.42 ABZR86_RS04445 cytochrome-c oxidase, cbb3-type subunit II low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF2466 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) 0.49 GFF4136 Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) low > 90

Not shown: 49 genomes with orthologs for TX73_015860 only; 0 genomes with orthologs for TX73_000095 only