Conservation of cofitness between SMc03006 and SMc01022 in Sinorhizobium meliloti 1021

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc03006 chemotaxis regulator protein 1.0 SMc01022 cytochrome B transmembrane protein 0.21 16
Agrobacterium fabrum C58 0.94 Atu0516 chemotaxis receiver protein 0.42 Atu1483 cytochrome b561 low > 89
Phaeobacter inhibens DSM 17395 0.57 PGA1_262p02130 response regulator receiver 0.18 PGA1_c26050 putative cytochrome b561 low > 62
Sphingomonas koreensis DSMZ 15582 0.56 Ga0059261_1121 Response regulator receiver domain 0.19 Ga0059261_3980 Cytochrome B561 — —
Azospirillum sp. SherDot2 0.53 MPMX19_01947 Chemotaxis protein CheY 0.14 MPMX19_00292 Cytochrome b561 low > 112
Dechlorosoma suillum PS 0.52 Dsui_1707 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 0.15 Dsui_2355 cytochrome B561 low > 51
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_19555 response regulator 0.15 CSW01_15215 cytochrome b low > 62
Rhodospirillum rubrum S1H 0.49 Rru_A1398 Response regulator receiver domain protein (CheY) (NCBI) 0.22 Rru_A3682 Cytochrome B561 (NCBI) low > 58
Pseudomonas sp. S08-1 0.49 OH686_21870 Chemotaxis regulator - transmits chemoreceptor signals to flagellar motor components CheY 0.19 OH686_18890 Cytochrome b561 — —
Pseudomonas stutzeri RCH2 0.49 Psest_0659 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 0.18 Psest_0307 Cytochrome B561 — —
Shewanella oneidensis MR-1 0.48 SO2318 cheY-2 chemotaxis protein CheY (NCBI ptt file) 0.19 SO3371 hypothetical Cytochrome B561 (NCBI ptt file) low > 76
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_02885 ompR response regulator 0.19 OKGIIK_01590 cytochrome B low > 52
Rhodanobacter denitrificans MT42 0.47 LRK55_RS13375 response regulator 0.20 LRK55_RS05015 cytochrome b low > 63
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_420 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY 0.17 Pf6N2E2_4633 Cytochrome B561 low > 103
Lysobacter sp. OAE881 0.47 ABIE51_RS16910 response regulator 0.18 ABIE51_RS16125 cytochrome b low > 62
Pseudomonas sp. RS175 0.47 PFR28_02510 Chemotaxis protein CheY 0.18 PFR28_04206 Cytochrome b561 low > 88
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS13635 response regulator 0.20 LRK54_RS05235 cytochrome b low > 59
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.2861.1 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY 0.21 Xcc-8004.1605.1 Cytochrome B561 low > 74
Shewanella loihica PV-4 0.47 Shew_0114 response regulator receiver protein (RefSeq) 0.17 Shew_1120 cytochrome B561 (RefSeq) low > 60
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_0788 Response regulator receiver 0.17 Psyr_0456 Cytochrome B561, bacterial low > 86
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_0788 Response regulator receiver 0.17 Psyr_0456 Cytochrome B561, bacterial low > 86
Rhodopseudomonas palustris CGA009 0.46 TX73_000735 response regulator 0.21 TX73_002630 cytochrome b low > 86
Shewanella amazonensis SB2B 0.46 Sama_3494 response regulator receiver protein (RefSeq) 0.16 Sama_0949 cytochrome b561 (RefSeq) low > 62
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS22235 response regulator 0.19 ABZR86_RS19080 cytochrome b low > 74
Shewanella sp. ANA-3 0.45 Shewana3_2219 response regulator receiver protein (RefSeq) 0.18 Shewana3_1178 cytochrome B561 (RefSeq) low > 73
Bosea sp. OAE506 0.44 ABIE41_RS01705 response regulator 0.14 ABIE41_RS11040 cytochrome b/b6 domain-containing protein — —
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_05741 two-component system, chemotaxis family, response regulator CheY 0.20 H281DRAFT_01400 cytochrome b561 low > 103
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS19005 chemotaxis protein CheY 0.20 BPHYT_RS03445 cytochrome B561 low > 109
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS29015 response regulator 0.16 QEN71_RS26675 cytochrome b low > 153
Paraburkholderia graminis OAS925 0.42 ABIE53_000126 two-component system chemotaxis response regulator CheY 0.21 ABIE53_000824 cytochrome b561 low > 113
Ralstonia solanacearum GMI1000 0.40 RS_RS23925 response regulator 0.20 RS_RS13605 cytochrome b low > 80
Ralstonia solanacearum PSI07 0.40 RPSI07_RS06260 response regulator 0.21 RPSI07_RS11585 cytochrome b — —
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS17955 response regulator 0.21 ABZR87_RS01310 cytochrome b — —
Variovorax sp. OAS795 0.37 ABID97_RS24705 response regulator 0.13 ABID97_RS04800 cytochrome b/b6 domain-containing protein low > 91
Variovorax sp. SCN45 0.36 GFF2151 twitching motility protein PilG 0.15 GFF6284 Cytochrome b561 low > 127
Ralstonia solanacearum UW163 0.36 UW163_RS21765 response regulator 0.21 UW163_RS07910 cytochrome b — —
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS17385 response regulator 0.21 RALBFv3_RS05715 cytochrome b low > 76
Pseudomonas putida KT2440 0.36 PP_4992 Protein PilG 0.18 PP_4982 putative cytochrome b561, iron-regulated — —
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_1022 twitching motility protein PilG 0.15 PfGW456L13_2584 Cytochrome B561, bacterial precursor low > 87
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_3627 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY 0.17 Pf1N1B4_2380 Cytochrome B561 low > 87
Pseudomonas simiae WCS417 0.35 PS417_19690 histidine kinase 0.17 PS417_26535 cytochrome B561 low > 88
Castellaniella sp019104865 MT123 0.35 ABCV34_RS05810 chemotaxis response regulator CheY 0.16 ABCV34_RS06055 cytochrome b low > 48
Serratia liquefaciens MT49 0.35 IAI46_16010 chemotaxis response regulator CheY 0.15 IAI46_09695 cytochrome b low > 86
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_08105 pilus assembly protein PilG 0.22 AO353_29080 cytochrome B low > 101
Pectobacterium carotovorum WPP14 0.35 HER17_RS08125 chemotaxis response regulator CheY 0.13 HER17_RS08580 cytochrome b low > 75
Dickeya dianthicola ME23 0.35 DZA65_RS14050 chemotaxis protein CheY 0.14 DZA65_RS13725 cytochrome b low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF1663 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY 0.12 GFF3336 Cytochrome B561 low > 78
Pantoea sp. MT58 0.34 IAI47_08335 chemotaxis response regulator CheY 0.14 IAI47_12240 cytochrome b low > 76
Escherichia coli ECRC102 0.34 NIAGMN_01905 cheY chemotaxis regulatory protein CheY 0.18 NIAGMN_24075 yceJ Cytochrome b561-like protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_01846 Chemotaxis protein CheY 0.18 OHPLBJKB_02608 Cytochrome b561 low > 73
Escherichia coli BL21 0.34 ECD_01853 chemotaxis regulator transmitting signal to flagellar motor component 0.18 ECD_01053 putative cytochrome b561 — —
Escherichia coli ECRC101 0.34 MCAODC_19250 cheY chemotaxis regulatory protein CheY 0.18 MCAODC_23115 yceJ Cytochrome b561-like protein — —
Escherichia coli ECRC101 0.34 OKFHMN_26155 cheY chemotaxis regulatory protein CheY 0.18 OKFHMN_03755 yceJ Cytochrome b561-like protein — —
Escherichia coli ECRC98 0.34 JDDGAC_00730 cheY chemotaxis regulatory protein CheY 0.18 JDDGAC_07415 yceJ Cytochrome b561-like protein — —
Escherichia coli ECRC99 0.34 KEDOAH_01950 cheY chemotaxis regulatory protein CheY 0.18 KEDOAH_24000 yceJ Cytochrome b561-like protein — —
Escherichia coli ECOR27 0.34 NOLOHH_16595 cheY chemotaxis regulatory protein CheY 0.18 NOLOHH_21285 yceJ Cytochrome b561-like protein — —
Escherichia coli ECRC62 0.34 BNILDI_15385 cheY chemotaxis regulatory protein CheY 0.18 BNILDI_19445 yceJ Cytochrome b561-like protein — —
Escherichia coli BW25113 0.34 b1882 cheY chemotaxis regulator transmitting signal to flagellar motor component (NCBI) 0.18 b1057 yceJ predicted cytochrome b561 (NCBI) low > 76
Kangiella aquimarina DSM 16071 0.34 B158DRAFT_0188 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.15 B158DRAFT_0324 Cytochrome B561 low > 40
Rahnella sp. WP5 0.34 EX31_RS11355 chemotaxis protein CheY 0.13 EX31_RS00195 hydrogenase low > 89
Escherichia fergusonii Becca 0.34 EFB2_02061 Chemotaxis protein CheY 0.18 EFB2_02917 Cytochrome b561 low > 86
Escherichia coli Nissle 1917 0.34 ECOLIN_RS10750 chemotaxis response regulator CheY 0.18 ECOLIN_RS06135 cytochrome b — —
Escherichia coli ECOR38 0.34 HEPCGN_04575 cheY chemotaxis regulatory protein CheY 0.16 HEPCGN_23735 yceJ Cytochrome b561-like protein low > 85
Enterobacter sp. TBS_079 0.33 MPMX20_02786 Chemotaxis protein CheY 0.17 MPMX20_01737 Cytochrome b561 low > 85

Not shown: 12 genomes with orthologs for SMc03006 only; 8 genomes with orthologs for SMc01022 only