Conservation of cofitness between RR42_RS31760 and RR42_RS20055 in Cupriavidus basilensis FW507-4G11

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS31760 IclR family transcriptional regulator 1.0 RR42_RS20055 ATP-dependent DNA helicase Rep 0.34 10
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS07510 IclR family transcriptional regulator 0.63 HSERO_RS21590 ATP-dependent DNA helicase Rep low > 78
Acidovorax sp. GW101-3H11 0.37 Ac3H11_3905 Ferrichrome-iron receptor 0.40 Ac3H11_866 ATP-dependent DNA helicase Rep — —
Rhodanobacter denitrificans FW104-10B01 0.24 LRK54_RS02745 TonB-dependent siderophore receptor 0.35 LRK54_RS10795 UvrD-helicase domain-containing protein — —
Rhodanobacter denitrificans MT42 0.24 LRK55_RS02500 TonB-dependent siderophore receptor 0.35 LRK55_RS10435 UvrD-helicase domain-containing protein — —
Variovorax sp. OAS795 0.24 ABID97_RS23370 TonB-dependent siderophore receptor 0.45 ABID97_RS05510 UvrD-helicase domain-containing protein — —
Ralstonia solanacearum GMI1000 0.23 RS_RS14625 TonB-dependent siderophore receptor 0.84 RS_RS16480 ATP-dependent DNA helicase Rep low > 80
Pseudomonas simiae WCS417 0.23 PS417_00680 TonB-dependent receptor 0.37 PS417_27670 ATP-dependent DNA helicase Rep — —
Ralstonia solanacearum PSI07 0.23 RPSI07_RS10550 TonB-dependent siderophore receptor 0.83 RPSI07_RS08600 ATP-dependent DNA helicase Rep low > 81
Ralstonia solanacearum UW163 0.23 UW163_RS06950 TonB-dependent siderophore receptor 0.84 UW163_RS04975 ATP-dependent DNA helicase Rep — —
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS06675 TonB-dependent siderophore receptor 0.84 RALBFv3_RS08635 ATP-dependent DNA helicase Rep low > 76
Pseudomonas stutzeri RCH2 0.22 Psest_0380 TonB-dependent siderophore receptor 0.37 Psest_3778 ATP-dependent DNA helicase Rep — —
Lysobacter sp. OAE881 0.22 ABIE51_RS00595 TonB-dependent siderophore receptor 0.34 ABIE51_RS00370 UvrD-helicase domain-containing protein — —
Variovorax sp. SCN45 0.22 GFF5295 Ferrichrome-iron receptor 0.45 GFF5842 ATP-dependent DNA helicase Rep — —
Paraburkholderia graminis OAS925 0.21 ABIE53_001694 iron complex outermembrane receptor protein 0.76 ABIE53_000233 ATP-dependent DNA helicase Rep — —
Serratia liquefaciens MT49 0.21 IAI46_21185 ferrichrome porin FhuA 0.40 IAI46_00565 DNA helicase Rep — —
Marinobacter adhaerens HP15 0.21 HP15_3673 ferrichrome outer membrane transporter 0.39 HP15_214 DNA helicase, ATP-dependent, RepA type — —
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_1636 Ferrichrome-iron receptor 0.37 Pf6N2E2_4398 ATP-dependent DNA helicase Rep — —
Pectobacterium carotovorum WPP14 0.20 HER17_RS17620 TonB-dependent siderophore receptor 0.41 HER17_RS01120 DNA helicase Rep — —
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_04924 iron complex outermembrane recepter protein 0.77 H281DRAFT_02416 ATP-dependent DNA helicase Rep — —
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS30735 TonB-dependent siderophore receptor 0.77 QEN71_RS29185 UvrD-helicase domain-containing protein low > 153
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS12695 TonB-dependent siderophore receptor 0.37 PFLU_RS29345 DNA helicase Rep — —
Pseudomonas fluorescens SBW25 0.20 PFLU_RS12695 TonB-dependent siderophore receptor 0.37 PFLU_RS29345 DNA helicase Rep — —
Pseudomonas sp. RS175 0.20 PFR28_04773 Ferrichrome outer membrane transporter/phage receptor 0.37 PFR28_04392 ATP-dependent DNA helicase Rep — —
Dickeya dadantii 3937 0.20 DDA3937_RS14700 TonB-dependent siderophore receptor 0.41 DDA3937_RS20105 DNA helicase Rep — —
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS20275 TonB-denpendent receptor 0.77 BPHYT_RS19305 ATP-dependent DNA helicase Rep low > 109
Dickeya dianthicola ME23 0.20 DZA65_RS15585 TonB-dependent siderophore receptor 0.40 DZA65_RS21290 DNA helicase Rep — —
Pseudomonas sp. S08-1 0.20 OH686_01055 Ferrichrome-iron receptor 0.36 OH686_13715 ATP-dependent DNA helicase Rep — —
Pseudomonas fluorescens FW300-N2C3 0.19 AO356_14070 TonB-dependent receptor 0.37 AO356_12655 ATP-dependent DNA helicase Rep — —
Pseudomonas fluorescens FW300-N1B4 0.19 Pf1N1B4_1813 Ferrichrome-iron receptor 0.37 Pf1N1B4_2151 ATP-dependent DNA helicase Rep — —
Dickeya dianthicola 67-19 0.19 HGI48_RS14640 TonB-dependent siderophore receptor 0.40 HGI48_RS20245 DNA helicase Rep — —
Klebsiella michiganensis M5al 0.19 BWI76_RS05125 ferrichrome porin FhuA 0.39 BWI76_RS01020 DNA helicase Rep — —
Pseudomonas putida KT2440 0.19 PP_3155 putative Outer membrane ferric siderophore receptor 0.38 PP_5264 helicase a single-stranded DNA dependent ATPase — —
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_3124 TonB-dependent siderophore receptor 0.38 Psyr_0075 ATP-dependent DNA helicase Rep — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_3124 TonB-dependent siderophore receptor 0.38 Psyr_0075 ATP-dependent DNA helicase Rep — —
Dechlorosoma suillum PS 0.19 Dsui_2950 TonB-dependent siderophore receptor 0.54 Dsui_0933 DNA/RNA helicase, superfamily I — —
Enterobacter sp. TBS_079 0.18 MPMX20_00608 Ferrichrome outer membrane transporter/phage receptor 0.39 MPMX20_04494 ATP-dependent DNA helicase Rep — —
Pseudomonas fluorescens FW300-N2E3 0.18 AO353_05095 TonB-dependent receptor 0.37 AO353_09120 ATP-dependent DNA helicase Rep — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF4258 Ferrichrome-iron receptor 0.39 GFF2894 ATP-dependent DNA helicase Rep — —
Pantoea sp. MT58 0.18 IAI47_15610 ferrichrome porin FhuA 0.40 IAI47_18545 DNA helicase Rep — —
Ralstonia sp. UNC404CL21Col 0.18 ABZR87_RS12840 TonB-dependent siderophore receptor 0.85 ABZR87_RS03915 UvrD-helicase domain-containing protein low > 80
Rahnella sp. WP5 0.18 EX31_RS03225 ferrichrome porin FhuA 0.39 EX31_RS15030 DNA helicase Rep — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.17 OHPLBJKB_03512 Ferrichrome outer membrane transporter/phage receptor 0.39 OHPLBJKB_04276 ATP-dependent DNA helicase Rep low > 73
Shewanella amazonensis SB2B 0.17 Sama_2875 outer membrane protein (RefSeq) 0.39 Sama_3266 ATP-dependent DNA helicase Rep (RefSeq) — —
Pseudomonas fluorescens GW456-L13 0.17 PfGW456L13_1133 Ferrichrome-iron receptor @ Ferric siderophore receptor, TonB dependent 0.37 PfGW456L13_819 ATP-dependent DNA helicase Rep — —
Shewanella sp. ANA-3 0.17 Shewana3_0983 TonB-dependent siderophore receptor (RefSeq) 0.40 Shewana3_0374 ATP-dependent DNA helicase Rep (RefSeq) — —
Xanthomonas campestris pv. campestris strain 8004 0.17 Xcc-8004.5299.1 Ferrichrome-iron receptor 0.33 Xcc-8004.5266.1 ATP-dependent DNA helicase Rep — —
Enterobacter asburiae PDN3 0.17 EX28DRAFT_3739 TonB-dependent siderophore receptor 0.39 EX28DRAFT_4449 ATP-dependent DNA helicase Rep (EC 3.6.1.-) — —
Escherichia coli ECOR38 0.17 HEPCGN_08270 fhuA ferrichrome porin FhuA 0.39 HEPCGN_13320 rep DNA helicase Rep low > 87
Shewanella oneidensis MR-1 0.17 SO1156 TonB-dependent receptor (NCBI ptt file) 0.39 SO4325 rep ATP-dependent DNA helicase Rep (NCBI ptt file) — —
Vibrio cholerae E7946 ATCC 55056 0.17 CSW01_01065 TonB-dependent siderophore receptor 0.40 CSW01_00865 DNA helicase Rep — —
Escherichia coli BL21 0.17 ECD_00149 ferrichrome outer membrane transporter 0.39 ECD_03656 DNA helicase and single-stranded DNA-dependent ATPase — —
Escherichia coli Nissle 1917 0.16 ECOLIN_RS00840 ferrichrome porin FhuA 0.39 ECOLIN_RS21690 DNA helicase Rep low > 55
Escherichia fergusonii Becca 0.16 EFB2_03894 Ferrichrome outer membrane transporter/phage receptor 0.39 EFB2_04860 ATP-dependent DNA helicase Rep — —
Escherichia coli ECRC102 0.16 NIAGMN_08170 fhuA ferrichrome porin FhuA 0.39 NIAGMN_12365 rep DNA helicase Rep — —
Escherichia coli ECRC98 0.16 JDDGAC_13915 fhuA ferrichrome porin FhuA 0.39 JDDGAC_18230 rep DNA helicase Rep — —
Escherichia coli ECRC99 0.16 KEDOAH_17835 fhuA ferrichrome porin FhuA 0.39 KEDOAH_13540 rep DNA helicase Rep — —
Escherichia coli ECRC100 0.16 OKFHMN_10320 fhuA ferrichrome porin FhuA 0.39 OKFHMN_14610 rep DNA helicase Rep — —
Escherichia coli ECRC101 0.16 MCAODC_00835 fhuA ferrichrome porin FhuA 0.39 MCAODC_05115 rep DNA helicase Rep — —
Escherichia coli ECOR27 0.16 NOLOHH_02665 fhuA ferrichrome porin FhuA 0.39 NOLOHH_06745 rep DNA helicase Rep — —
Escherichia coli BW25113 0.16 b0150 fhuA ferrichrome outer membrane transporter (NCBI) 0.39 b3778 rep DNA helicase and single-stranded DNA-dependent ATPase (NCBI) low > 76
Escherichia coli ECRC62 0.16 BNILDI_09005 fhuA ferrichrome porin FhuA 0.39 BNILDI_04780 rep DNA helicase Rep low > 75
Hydrogenophaga sp. GW460-11-11-14-LB1 0.15 GFF5752 Ferrichrome-iron receptor 0.44 GFF1778 ATP-dependent DNA helicase Rep low > 90
Acinetobacter radioresistens SK82 0.15 MPMX26_01925 Metal-pseudopaline receptor CntO 0.38 MPMX26_02416 ATP-dependent DNA helicase Rep — —
Alteromonas macleodii MIT1002 0.14 MIT1002_01786 Ferric hydroxamate uptake 0.39 MIT1002_00071 ATP-dependent DNA helicase rep — —
Dyella japonica UNC79MFTsu3.2 0.13 ABZR86_RS04635 TonB-dependent receptor 0.36 ABZR86_RS16790 UvrD-helicase domain-containing protein — —

Not shown: 14 genomes with orthologs for RR42_RS31760 only; 5 genomes with orthologs for RR42_RS20055 only