Conservation of cofitness between RR42_RS15875 and RR42_RS02870 in Cupriavidus basilensis FW507-4G11

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS15875 hypothetical protein 1.0 RR42_RS02870 RNA helicase 0.52 1
Ralstonia solanacearum IBSBF1503 0.89 RALBFv3_RS12610 DUF179 domain-containing protein 0.61 RALBFv3_RS11875 RNA helicase low > 76
Ralstonia solanacearum UW163 0.89 UW163_RS00955 DUF179 domain-containing protein 0.61 UW163_RS01715 RNA helicase — —
Ralstonia solanacearum PSI07 0.88 RPSI07_RS20650 YqgE/AlgH family protein 0.61 RPSI07_RS21325 RNA helicase low > 81
Ralstonia solanacearum GMI1000 0.87 RS_RS03395 YqgE/AlgH family protein 0.61 RS_RS02695 RNA helicase — —
Ralstonia sp. UNC404CL21Col 0.85 ABZR87_RS08610 YqgE/AlgH family protein 0.61 ABZR87_RS07850 DEAD/DEAH box helicase low > 80
Paraburkholderia graminis OAS925 0.79 ABIE53_001128 putative transcriptional regulator 0.57 ABIE53_003462 ATP-dependent RNA helicase RhlE low > 113
Paraburkholderia bryophila 376MFSha3.1 0.78 H281DRAFT_04814 putative transcriptional regulator 0.56 H281DRAFT_04222 ATP-dependent RNA helicase RhlE low > 103
Burkholderia phytofirmans PsJN 0.78 BPHYT_RS04220 hypothetical protein 0.57 BPHYT_RS16445 RNA helicase low > 109
Paraburkholderia sabiae LMG 24235 0.77 QEN71_RS25795 YqgE/AlgH family protein 0.57 QEN71_RS02265 DEAD/DEAH box helicase low > 153
Variovorax sp. OAS795 0.63 ABID97_RS24675 YqgE/AlgH family protein 0.47 ABID97_RS21170 DEAD/DEAH box helicase low > 91
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS02315 transcriptional regulator 0.53 HSERO_RS08565 RNA helicase low > 78
Dechlorosoma suillum PS 0.60 Dsui_0593 putative transcriptional regulator 0.49 Dsui_3174 DNA/RNA helicase, superfamily II low > 51
Castellaniella sp019104865 MT123 0.55 ABCV34_RS10730 YqgE/AlgH family protein 0.48 ABCV34_RS12515 DEAD/DEAH box helicase low > 48
Alteromonas macleodii MIT1002 0.48 MIT1002_03056 hypothetical protein 0.43 MIT1002_03342 ATP-dependent RNA helicase RhlE low > 70
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_08120 hypothetical protein 0.43 AO353_08030 DEAD/DEAH box helicase low > 101
Pseudomonas fluorescens SBW25 0.47 PFLU_RS28330 YqgE/AlgH family protein 0.43 PFLU_RS28180 DEAD/DEAH box helicase low > 109
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_2350 UPF0301 protein YqgE 0.44 Pf1N1B4_2382 ATP-dependent RNA helicase RhlE low > 87
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS28330 YqgE/AlgH family protein 0.43 PFLU_RS28180 DEAD/DEAH box helicase low > 109
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_1019 UPF0301 protein YqgE 0.45 PfGW456L13_1048 ATP-dependent RNA helicase RhlE low > 87
Pseudomonas simiae WCS417 0.46 PS417_26685 hypothetical protein 0.43 PS417_26525 DEAD/DEAH box helicase low > 88
Phaeobacter inhibens DSM 17395 0.46 PGA1_c03130 Putative transcriptional regulator 0.31 PGA1_c10590 putative ATP-dependent RNA helicase RhlE low > 62
Pseudomonas sp. RS175 0.45 PFR28_04234 hypothetical protein 0.44 PFR28_04204 ATP-dependent RNA helicase RhlE low > 88
Pectobacterium carotovorum WPP14 0.45 HER17_RS02630 YqgE/AlgH family protein 0.51 HER17_RS13325 ATP-dependent RNA helicase RhlE low > 75
Shewanella sp. ANA-3 0.45 Shewana3_1200 hypothetical protein (RefSeq) 0.47 Shewana3_0810 DEAD/DEAH box helicase domain-containing protein (RefSeq) low > 73
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS04210 YqgE/AlgH family protein 0.39 LRK54_RS02640 DEAD/DEAH box helicase low > 59
Rhodanobacter denitrificans MT42 0.45 LRK55_RS03980 YqgE/AlgH family protein 0.39 LRK55_RS02395 DEAD/DEAH box helicase — —
Dickeya dianthicola 67-19 0.45 HGI48_RS18500 YqgE/AlgH family protein 0.51 HGI48_RS08785 ATP-dependent RNA helicase RhlE low > 71
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_13465 hypothetical protein 0.43 AO356_13590 DEAD/DEAH box helicase low > 104
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_11085 algH YqgE/AlgH family protein 0.39 OKGIIK_09690 srmB RNA helicase low > 52
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0485 Protein of unknown function DUF179 0.44 Psyr_0458 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0485 Protein of unknown function DUF179 0.44 Psyr_0458 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal low > 86
Dickeya dianthicola ME23 0.45 DZA65_RS19635 YqgE/AlgH family protein 0.50 DZA65_RS09075 ATP-dependent RNA helicase RhlE low > 75
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.1720.1 UPF0301 protein YqgE 0.41 Xcc-8004.4527.1 ATP-dependent RNA helicase RhlE low > 74
Dickeya dadantii 3937 0.45 DDA3937_RS18565 YqgE/AlgH family protein 0.51 DDA3937_RS08645 ATP-dependent RNA helicase RhlE low > 74
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_4609 UPF0301 protein YqgE 0.43 Pf6N2E2_4635 ATP-dependent RNA helicase RhlE low > 103
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS10380 YqgE/AlgH family protein 0.39 ABZR86_RS08975 DEAD/DEAH box helicase — —
Azospirillum sp. SherDot2 0.44 MPMX19_01077 hypothetical protein 0.36 MPMX19_02097 ATP-dependent RNA helicase RhlE low > 112
Shewanella amazonensis SB2B 0.44 Sama_2472 putative transcriptional regulator (RefSeq) 0.45 Sama_2687 DEAD-box ATP dependent DNA helicase (RefSeq) low > 62
Lysobacter sp. OAE881 0.44 ABIE51_RS16025 YqgE/AlgH family protein 0.38 ABIE51_RS06650 DEAD/DEAH box helicase low > 62
Rahnella sp. WP5 0.44 EX31_RS02670 YqgE/AlgH family protein 0.51 EX31_RS23775 ATP-dependent RNA helicase RhlE low > 89
Serratia liquefaciens MT49 0.44 IAI46_21395 YqgE/AlgH family protein 0.52 IAI46_06620 ATP-dependent RNA helicase RhlE low > 86
Klebsiella michiganensis M5al 0.43 BWI76_RS24080 DUF179 domain-containing protein 0.50 BWI76_RS08915 ATP-dependent RNA helicase RhlE low > 92
Shewanella loihica PV-4 0.43 Shew_1144 hypothetical protein (RefSeq) 0.47 Shew_0604 DEAD/DEAH box helicase domain-containing protein (RefSeq) 0.32 38
Pantoea sp. MT58 0.43 IAI47_03610 YqgE/AlgH family protein 0.51 IAI47_13435 ATP-dependent RNA helicase RhlE low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF3050 UPF0301 protein YqgE 0.49 GFF696 ATP-dependent RNA helicase RhlE low > 78
Erwinia tracheiphila SCR3 0.42 LU632_RS05475 YqgE/AlgH family protein 0.51 LU632_RS09215 rhlE ATP-dependent RNA helicase RhlE low > 74
Agrobacterium fabrum C58 0.42 Atu0781 hypothetical protein 0.33 Atu2333 ATP-dependent RNA helicase low > 89
Magnetospirillum magneticum AMB-1 0.41 AMB_RS04505 YqgE/AlgH family protein 0.38 AMB_RS07215 ATP-dependent helicase low > 64
Enterobacter asburiae PDN3 0.41 EX28DRAFT_2986 Putative transcriptional regulator 0.50 EX28DRAFT_2194 Superfamily II DNA and RNA helicases low > 76
Enterobacter sp. TBS_079 0.41 MPMX20_03806 hypothetical protein 0.50 MPMX20_01425 ATP-dependent RNA helicase RhlE low > 85
Bosea sp. OAE506 0.41 ABIE41_RS23005 YqgE/AlgH family protein 0.35 ABIE41_RS22380 DEAD/DEAH box helicase low > 77
Sinorhizobium meliloti 1021 0.38 SMc00019 hypothetical protein 0.33 SM_b20880 ATP-dependent RNA helicase low > 103
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_03506 putative transcriptional regulator 0.35 CCNA_00878 ATP-dependent RNA helicase low > 67
Caulobacter crescentus NA1000 0.37 CCNA_03506 putative transcriptional regulator 0.35 CCNA_00878 ATP-dependent RNA helicase low > 66
Phocaeicola vulgatus CL09T03C04 0.20 HMPREF1058_RS18575 YqgE/AlgH family protein 0.36 HMPREF1058_RS02855 DEAD/DEAH box helicase low > 67
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS14885 YqgE/AlgH family protein 0.36 ABI39_RS02170 DEAD/DEAH box helicase low > 72

Not shown: 40 genomes with orthologs for RR42_RS15875 only; 0 genomes with orthologs for RR42_RS02870 only