Conservation of cofitness between QEN71_RS23895 and QEN71_RS02715 in Paraburkholderia sabiae LMG 24235

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS23895 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 1.0 QEN71_RS02715 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.62 1
Paraburkholderia graminis OAS925 0.90 ABIE53_001640 23S rRNA (adenine2030-N6)-methyltransferase 0.86 ABIE53_003371 tRNA A37 threonylcarbamoyladenosine dehydratase low > 113
Burkholderia phytofirmans PsJN 0.90 BPHYT_RS06880 competence protein ComJ 0.87 BPHYT_RS15990 heme biosynthesis protein HemY low > 109
Ralstonia solanacearum GMI1000 0.67 RS_RS16875 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.54 RS_RS03895 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 80
Ralstonia solanacearum UW163 0.67 UW163_RS04530 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.50 UW163_RS00465 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA — —
Ralstonia solanacearum IBSBF1503 0.67 RALBFv3_RS09065 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.50 RALBFv3_RS13100 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 76
Ralstonia solanacearum PSI07 0.66 RPSI07_RS08205 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.50 RPSI07_RS20115 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 81
Ralstonia sp. UNC404CL21Col 0.66 ABZR87_RS04360 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.50 ABZR87_RS09175 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 80
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS09005 competence protein ComJ 0.48 RR42_RS15305 heme biosynthesis protein HemY low > 128
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS10595 competence protein ComJ 0.51 HSERO_RS06230 heme biosynthesis protein HemY low > 78
Castellaniella sp019104865 MT123 0.49 ABCV34_RS03075 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.37 ABCV34_RS00665 tRNA threonylcarbamoyladenosine dehydratase — —
Escherichia fergusonii Becca 0.44 EFB2_00316 Ribosomal RNA large subunit methyltransferase J 0.49 EFB2_01105 tRNA threonylcarbamoyladenosine dehydratase low > 86
Escherichia coli BL21 0.44 ECD_03348 23S rRNA m(6)A2030 methyltransferase, SAM-dependent 0.49 ECD_02663 tRNA threonylcarbamoyladenosine dehydratase; sulfur acceptor for CsdA low > 61
Enterobacter sp. TBS_079 0.44 MPMX20_04398 Ribosomal RNA large subunit methyltransferase J 0.45 MPMX20_03675 tRNA threonylcarbamoyladenosine dehydratase low > 85
Escherichia coli ECRC62 0.44 BNILDI_03215 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.49 BNILDI_10480 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 75
Escherichia coli ECRC101 0.44 MCAODC_06925 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.48 MCAODC_10620 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 87
Escherichia coli ECOR27 0.44 NOLOHH_08345 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.49 NOLOHH_11975 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 75
Escherichia coli ECRC102 0.44 NIAGMN_14175 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.48 NIAGMN_17865 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA — —
Escherichia coli ECRC100 0.44 OKFHMN_16410 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.48 OKFHMN_20095 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 80
Escherichia coli Nissle 1917 0.44 ECOLIN_RS19990 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.49 ECOLIN_RS15670 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 55
Escherichia coli ECRC99 0.44 KEDOAH_11735 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.48 KEDOAH_08035 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF1683 Protein involved in catabolism of external DNA 0.34 GFF4538 Probable HesA/MoeB/ThiF family protein low > 90
Enterobacter asburiae PDN3 0.43 EX28DRAFT_4062 Protein involved in catabolism of external DNA 0.45 EX28DRAFT_2888 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 low > 76
Escherichia coli ECOR38 0.43 HEPCGN_15320 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.49 HEPCGN_19350 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 87
Variovorax sp. SCN45 0.43 GFF2057 23S rRNA (adenine(2030)-N(6))-methyltransferase (EC 2.1.1.266) 0.34 GFF289 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 low > 127
Klebsiella michiganensis M5al 0.43 BWI76_RS26680 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.48 BWI76_RS22975 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 92
Escherichia coli ECRC98 0.43 JDDGAC_20040 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.48 JDDGAC_23760 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF515 Protein involved in catabolism of external DNA 0.49 GFF4870 CsdL (EC-YgdL) protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_00204 Ribosomal RNA large subunit methyltransferase J 0.49 OHPLBJKB_00919 tRNA threonylcarbamoyladenosine dehydratase low > 73
Escherichia coli BW25113 0.43 b3499 yhiR predicted DNA (exogenous) processing protein (NCBI) 0.49 b2812 ygdL hypothetical protein (NCBI) low > 76
Pectobacterium carotovorum WPP14 0.43 HER17_RS21245 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.47 HER17_RS16435 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 75
Serratia liquefaciens MT49 0.42 IAI46_24235 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.47 IAI46_20360 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 86
Rahnella sp. WP5 0.42 EX31_RS05170 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.48 EX31_RS13130 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 89
Pantoea sp. MT58 0.42 IAI47_01340 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.49 IAI47_04005 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 76
Dickeya dianthicola 67-19 0.42 HGI48_RS00055 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.46 HGI48_RS05035 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 71
Variovorax sp. OAS795 0.42 ABID97_RS25005 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.39 ABID97_RS16680 tRNA threonylcarbamoyladenosine dehydratase low > 91
Dickeya dianthicola ME23 0.41 DZA65_RS00045 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.46 DZA65_RS05375 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 75
Dickeya dadantii 3937 0.41 DDA3937_RS21255 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.46 DDA3937_RS05030 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 74
Erwinia tracheiphila SCR3 0.40 LU632_RS19485 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.46 LU632_RS06230 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 74
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_01005 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.46 CSW01_11750 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 62
Acidovorax sp. GW101-3H11 0.40 Ac3H11_3047 Protein involved in catabolism of external DNA 0.39 Ac3H11_2482 Probable HesA/MoeB/ThiF family protein low > 79
Shewanella loihica PV-4 0.39 Shew_3648 hypothetical protein (RefSeq) 0.42 Shew_3251 UBA/THIF-type NAD/FAD binding protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.39 Sama_3563 hypothetical protein (RefSeq) 0.48 Sama_0546 HesA/MoeB/ThiF family protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.39 Shewana3_4038 hypothetical protein (RefSeq) 0.42 Shewana3_0735 UBA/THIF-type NAD/FAD binding protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.39 SO4659 conserved hypothetical protein (NCBI ptt file) 0.42 SO3895 HesA/MoeB/ThiF family protein (NCBI ptt file) low > 76
Pseudomonas sp. S08-1 0.38 OH686_09780 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.38 OH686_06545 HesA/MoeB/ThiF family protein low > 80
Pseudomonas putida KT2440 0.37 PP_4945 23S rRNA m(6)A2030 methyltransferase 0.37 PP_1527 tRNA threonylcarbamoyladenosine dehydratase (t(6)A37 dehydratase) low > 96
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_3679 Protein involved in catabolism of external DNA 0.38 Pf6N2E2_3081 HesA/MoeB/ThiF family protein related to EC-YgdL low > 103
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_08990 lactate dehydrogenase 0.37 AO356_06085 thiamine biosynthesis protein ThiF low > 104
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_4772 Protein of unknown function DUF519 0.37 Psyr_1333 UBA/THIF-type NAD/FAD binding fold protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_4772 Protein of unknown function DUF519 0.37 Psyr_1333 UBA/THIF-type NAD/FAD binding fold protein low > 86
Pseudomonas simiae WCS417 0.35 PS417_02200 lactate dehydrogenase 0.37 PS417_06165 thiamine biosynthesis protein ThiF — —
Pseudomonas fluorescens SBW25 0.35 PFLU_RS02255 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.38 PFLU_RS06230 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 109
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_12840 lactate dehydrogenase 0.38 AO353_16420 thiamine biosynthesis protein ThiF low > 101
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS02255 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.38 PFLU_RS06230 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 109
Pseudomonas stutzeri RCH2 0.35 Psest_0408 Protein involved in catabolism of external DNA 0.38 Psest_1619 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 low > 67
Pseudomonas sp. RS175 0.35 PFR28_05056 Ribosomal RNA large subunit methyltransferase J 0.37 PFR28_00387 tRNA threonylcarbamoyladenosine dehydratase low > 88
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_1481 Protein involved in catabolism of external DNA 0.37 Pf1N1B4_3074 HesA/MoeB/ThiF family protein related to EC-YgdL low > 87
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_219 Protein involved in catabolism of external DNA 0.37 PfGW456L13_4719 HesA/MoeB/ThiF family protein related to EC-YgdL low > 87
Alteromonas macleodii MIT1002 0.34 MIT1002_02015 Ribosomal RNA large subunit methyltransferase J 0.41 MIT1002_01936 Molybdopterin-synthase adenylyltransferase low > 70
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_04560 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.38 OKGIIK_03630 tcdA tRNA A37 threonylcarbamoyladenosine dehydratase low > 52
Rhodanobacter denitrificans MT42 0.32 LRK55_RS01780 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.41 LRK55_RS14520 tRNA threonylcarbamoyladenosine dehydratase low > 63
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS02005 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.41 LRK54_RS14805 tRNA threonylcarbamoyladenosine dehydratase low > 59
Lysobacter sp. OAE881 0.31 ABIE51_RS14285 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.40 ABIE51_RS12585 tRNA threonylcarbamoyladenosine dehydratase low > 62
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS21180 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.42 ABZR86_RS00565 ThiF family adenylyltransferase low > 74
Acinetobacter radioresistens SK82 0.31 MPMX26_02660 Ribosomal RNA large subunit methyltransferase J 0.39 MPMX26_00481 tRNA threonylcarbamoyladenosine dehydratase low > 36
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.1778.1 Protein involved in catabolism of external DNA 0.34 Xcc-8004.3494.1 Molybdopterin biosynthesis protein MoeB low > 74
Marinobacter adhaerens HP15 0.25 HP15_2563 protein containing DUF519 0.48 HP15_266 UBA/THIF-type NAD/FAD binding protein low > 73

Not shown: 15 genomes with orthologs for QEN71_RS23895 only; 6 genomes with orthologs for QEN71_RS02715 only