Conservation of cofitness between QEN71_RS02745 and QEN71_RS02125 in Paraburkholderia sabiae LMG 24235

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS02745 tRNA epoxyqueuosine(34) reductase QueG 1.0 QEN71_RS02125 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.52 16
Paraburkholderia graminis OAS925 0.76 ABIE53_003363 epoxyqueuosine reductase 0.84 ABIE53_000799 4-hydroxythreonine-4-phosphate dehydrogenase 0.42 17
Paraburkholderia bryophila 376MFSha3.1 0.75 H281DRAFT_04128 epoxyqueuosine reductase 0.84 H281DRAFT_04639 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) low > 103
Burkholderia phytofirmans PsJN 0.75 BPHYT_RS15960 iron-sulfur cluster binding protein 0.85 BPHYT_RS03300 4-hydroxythreonine-4-phosphate dehydrogenase — —
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS04220 epoxyqueuosine reductase 0.56 HSERO_RS03535 4-hydroxythreonine-4-phosphate dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS05120 tRNA epoxyqueuosine(34) reductase QueG 0.58 RALBFv3_RS11750 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Ralstonia solanacearum UW163 0.54 UW163_RS08505 tRNA epoxyqueuosine(34) reductase QueG 0.58 UW163_RS01835 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Ralstonia solanacearum PSI07 0.54 RPSI07_RS12175 tRNA epoxyqueuosine(34) reductase QueG 0.58 RPSI07_RS21465 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Ralstonia solanacearum GMI1000 0.54 RS_RS12740 tRNA epoxyqueuosine(34) reductase QueG 0.58 RS_RS02575 4-hydroxythreonine-4-phosphate dehydrogenase — —
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS03405 epoxyqueuosine reductase 0.56 RR42_RS02780 4-hydroxythreonine-4-phosphate dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS00775 tRNA epoxyqueuosine(34) reductase QueG 0.59 ABZR87_RS07705 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 80
Pseudomonas sp. S08-1 0.48 OH686_09500 epoxyqueuosine reductase 0.48 OH686_15045 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_0566 4Fe-4S cluster binding protein 0.45 Psyr_4626 4-hydroxythreonine-4-phosphate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_0566 4Fe-4S cluster binding protein 0.45 Psyr_4626 4-hydroxythreonine-4-phosphate dehydrogenase — —
Pseudomonas fluorescens SBW25 0.47 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG 0.46 PFLU_RS27460 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Pseudomonas simiae WCS417 0.47 PS417_02460 epoxyqueuosine reductase 0.46 PS417_25805 4-hydroxythreonine-4-phosphate dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG 0.46 PFLU_RS27460 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS00835 tRNA epoxyqueuosine(34) reductase QueG 0.44 ABZR86_RS11265 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_13115 epoxyqueuosine reductase 0.46 AO353_07310 4-hydroxythreonine-4-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_1418 Epoxyqueuosine (oQ) reductase QueG 0.45 Pf1N1B4_2529 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) — —
Pseudomonas sp. RS175 0.47 PFR28_05115 Epoxyqueuosine reductase 0.46 PFR28_04063 4-hydroxythreonine-4-phosphate dehydrogenase — —
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_160 Epoxyqueuosine (oQ) reductase QueG 0.45 PfGW456L13_1201 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) — —
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_03900 queG tRNA epoxyqueuosine(34) reductase QueG 0.40 OKGIIK_11620 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_08685 epoxyqueuosine reductase 0.45 AO356_14340 4-hydroxythreonine-4-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_3620 Epoxyqueuosine (oQ) reductase QueG 0.45 Pf6N2E2_4806 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) — —
Pseudomonas stutzeri RCH2 0.46 Psest_0677 iron-sulfur cluster binding protein, putative 0.47 Psest_3667 4-hydroxythreonine-4-phosphate dehydrogenase — —
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS15130 tRNA epoxyqueuosine(34) reductase QueG 0.43 LRK54_RS12310 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Marinobacter adhaerens HP15 0.45 HP15_2505 iron-sulfur cluster binding protein 0.47 HP15_3279 4-hydroxythreonine-4-phosphate dehydrogenase — —
Rhodanobacter denitrificans MT42 0.45 LRK55_RS14845 tRNA epoxyqueuosine(34) reductase QueG 0.43 LRK55_RS12045 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Lysobacter sp. OAE881 0.44 ABIE51_RS08045 tRNA epoxyqueuosine(34) reductase QueG 0.37 ABIE51_RS05390 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Escherichia coli ECRC62 0.44 BNILDI_06940 queG tRNA epoxyqueuosine(34) reductase QueG 0.47 BNILDI_08430 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_03876 Epoxyqueuosine reductase 0.47 OHPLBJKB_03604 4-hydroxythreonine-4-phosphate dehydrogenase low > 73
Klebsiella michiganensis M5al 0.44 BWI76_RS02505 tRNA epoxyqueuosine(34) reductase QueG 0.47 BWI76_RS04525 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 92
Escherichia coli BL21 0.44 ECD_04033 epoxyqueuosine reductase, cobalamine-stimulated; queosine biosynthesis 0.48 ECD_00056 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent low > 61
Escherichia coli ECOR27 0.44 NOLOHH_04550 queG tRNA epoxyqueuosine(34) reductase QueG 0.47 NOLOHH_03175 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 75
Escherichia coli BW25113 0.44 b4166 yjeS predicted Fe-S electron transport protein (NCBI) 0.48 b0052 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase (NCBI) 0.30 19
Pseudomonas putida KT2440 0.44 PP_4900 epoxyqueuosine reductase 0.47 PP_0402 4-hydroxythreonine-4-phosphate dehydrogenase — —
Escherichia coli ECOR38 0.43 HEPCGN_10515 queG tRNA epoxyqueuosine(34) reductase QueG 0.47 HEPCGN_08820 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 87
Escherichia coli ECRC98 0.43 JDDGAC_15925 queG tRNA epoxyqueuosine(34) reductase QueG 0.47 JDDGAC_14425 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 86
Escherichia coli ECRC102 0.43 NIAGMN_10135 queG tRNA epoxyqueuosine(34) reductase QueG 0.47 NIAGMN_08680 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Escherichia coli Nissle 1917 0.43 ECOLIN_RS24200 tRNA epoxyqueuosine(34) reductase QueG 0.47 ECOLIN_RS00290 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 55
Escherichia coli ECRC99 0.43 KEDOAH_15870 queG tRNA epoxyqueuosine(34) reductase QueG 0.47 KEDOAH_17325 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Escherichia coli ECRC100 0.43 OKFHMN_12285 queG tRNA epoxyqueuosine(34) reductase QueG 0.47 OKFHMN_10830 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 80
Alteromonas macleodii MIT1002 0.43 MIT1002_03794 Epoxyqueuosine reductase 0.45 MIT1002_00782 4-hydroxythreonine-4-phosphate dehydrogenase — —
Escherichia coli ECRC101 0.43 MCAODC_02800 queG tRNA epoxyqueuosine(34) reductase QueG 0.47 MCAODC_01345 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.68 14
Escherichia fergusonii Becca 0.43 EFB2_04369 Epoxyqueuosine reductase 0.47 EFB2_03991 4-hydroxythreonine-4-phosphate dehydrogenase low > 86
Enterobacter asburiae PDN3 0.43 EX28DRAFT_3363 epoxyqueuosine reductase 0.48 EX28DRAFT_3646 4-hydroxythreonine-4-phosphate dehydrogenase low > 76
Dechlorosoma suillum PS 0.43 Dsui_3502 iron-sulfur cluster binding protein, putative 0.52 Dsui_1585 4-hydroxythreonine-4-phosphate dehydrogenase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF819 Epoxyqueuosine (oQ) reductase QueG 0.48 GFF189 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) low > 78
Serratia liquefaciens MT49 0.43 IAI46_01595 tRNA epoxyqueuosine(34) reductase QueG 0.47 IAI46_03250 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 86
Enterobacter sp. TBS_079 0.43 MPMX20_00447 Epoxyqueuosine reductase 0.47 MPMX20_00748 4-hydroxythreonine-4-phosphate dehydrogenase low > 85
Dickeya dadantii 3937 0.43 DDA3937_RS18645 tRNA epoxyqueuosine(34) reductase QueG 0.45 DDA3937_RS18260 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 74
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_01810 tRNA epoxyqueuosine(34) reductase QueG 0.45 CSW01_02330 4-hydroxythreonine-4-phosphate dehydrogenase — —
Dickeya dianthicola 67-19 0.42 HGI48_RS18575 tRNA epoxyqueuosine(34) reductase QueG 0.45 HGI48_RS18195 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 71
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.2252.1 Epoxyqueuosine (oQ) reductase QueG 0.35 Xcc-8004.4270.1 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) low > 74
Dickeya dianthicola ME23 0.42 DZA65_RS19710 tRNA epoxyqueuosine(34) reductase QueG 0.45 DZA65_RS19335 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 75
Pectobacterium carotovorum WPP14 0.42 HER17_RS02555 tRNA epoxyqueuosine(34) reductase QueG 0.45 HER17_RS02965 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 75
Shewanella oneidensis MR-1 0.42 SO3861 iron-sulfur cluster-binding protein (NCBI ptt file) 0.44 SO3638 pdxA pyridoxal phosphate biosynthetic protein PdxA (NCBI ptt file) — —
Shewanella sp. ANA-3 0.41 Shewana3_0745 putative iron-sulfur cluster binding protein (RefSeq) 0.45 Shewana3_3208 4-hydroxythreonine-4-phosphate dehydrogenase (RefSeq) — —
Pantoea sp. MT58 0.41 IAI47_02560 tRNA epoxyqueuosine(34) reductase QueG 0.45 IAI47_16080 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 76
Shewanella loihica PV-4 0.41 Shew_2979 putative iron-sulfur cluster binding protein (RefSeq) 0.46 Shew_0880 4-hydroxythreonine-4-phosphate dehydrogenase (RefSeq) — —
Rahnella sp. WP5 0.41 EX31_RS08850 tRNA epoxyqueuosine(34) reductase QueG 0.50 EX31_RS03775 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 89
Shewanella amazonensis SB2B 0.39 Sama_2625 iron-sulfur cluster-binding protein (RefSeq) 0.45 Sama_2818 4-hydroxythreonine-4-phosphate dehydrogenase (RefSeq) — —
Acinetobacter radioresistens SK82 0.37 MPMX26_01783 Epoxyqueuosine reductase 0.45 MPMX26_00595 4-hydroxythreonine-4-phosphate dehydrogenase — —
Kangiella aquimarina DSM 16071 0.35 B158DRAFT_0486 iron-sulfur cluster binding protein, putative 0.41 B158DRAFT_0789 4-hydroxythreonine-4-phosphate dehydrogenase — —

Not shown: 15 genomes with orthologs for QEN71_RS02745 only; 1 genomes with orthologs for QEN71_RS02125 only