Conservation of cofitness between Psyr_4852 and Psyr_0704 in Pseudomonas syringae pv. syringae B728a

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4852 D-3-phosphoglycerate dehydrogenase 1.0 Psyr_0704 glutamate 5-kinase 0.90 7
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4852 D-3-phosphoglycerate dehydrogenase 1.00 Psyr_0704 glutamate 5-kinase 0.94 3
Pseudomonas orientalis W4I3 0.95 QF045_RS01430 phosphoglycerate dehydrogenase 0.93 QF045_RS25800 glutamate 5-kinase 0.96 41
Pseudomonas fluorescens SBW25 0.95 PFLU_RS28695 phosphoglycerate dehydrogenase 0.93 PFLU_RS25360 glutamate 5-kinase low > 109
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS28695 phosphoglycerate dehydrogenase 0.93 PFLU_RS25360 glutamate 5-kinase low > 109
Pseudomonas lactucae CFBP13502 0.95 GEMAOFIL_05548 D-3-phosphoglycerate dehydrogenase 0.94 GEMAOFIL_04860 Glutamate 5-kinase low > 96
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_3932 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.89 Pf6N2E2_5103 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA low > 103
Pseudomonas simiae WCS417 0.95 PS417_27040 3-phosphoglycerate dehydrogenase 0.93 PS417_23545 gamma-glutamyl kinase 0.66 37
Pseudomonas sp. SVBP6 0.95 COO64_RS12640 serA phosphoglycerate dehydrogenase 0.88 COO64_RS03090 proB glutamate 5-kinase — —
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_10300 3-phosphoglycerate dehydrogenase 0.89 AO356_15815 gamma-glutamyl kinase 0.61 53
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_08510 3-phosphoglycerate dehydrogenase 0.89 AO353_14115 gamma-glutamyl kinase 0.75 34
Pseudomonas sp. DMC3 0.94 GFF274 D-3-phosphoglycerate dehydrogenase 0.89 GFF3983 Glutamate 5-kinase — —
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_2272 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.93 Pf1N1B4_2800 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA — —
Pseudomonas sp. RS175 0.94 PFR28_04842 D-3-phosphoglycerate dehydrogenase 0.89 PFR28_03769 Glutamate 5-kinase — —
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_943 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.88 PfGW456L13_1472 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.84 17
Pseudomonas sp. BP01 0.94 JOY50_RS20615 serA phosphoglycerate dehydrogenase 0.85 JOY50_RS24725 proB glutamate 5-kinase 0.98 2
Pseudomonas putida KT2440 0.93 PP_5155 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase 0.86 PP_0691 Glutamate 5-kinase 0.35 87
Pseudomonas aeruginosa MRSN321 0.90 DY961_RS21535 serA;go_function=oxidoreductase phosphoglycerate dehydrogenase 0.87 DY961_RS23620 proB;go_function=glutamate glutamate 5-kinase low > 100
Pseudomonas sp. S08-1 0.90 OH686_11280 D-3-phosphoglycerate dehydrogenase 0.86 OH686_16305 Glutamate 5-kinase / RNA-binding C-terminal domain PUA low > 80
Pseudomonas aeruginosa PUPa3 0.90 DQ20_RS37755 serA;go_function=oxidoreductase phosphoglycerate dehydrogenase 0.87 DQ20_RS56085 proB;go_function=glutamate glutamate 5-kinase — —
Pseudomonas aeruginosa PA14 0.90 IKLFDK_23865 phosphoglycerate dehydrogenase 0.87 IKLFDK_00700 Glutamate 5-kinase — —
Pseudomonas stutzeri RCH2 0.89 Psest_3873 Phosphoglycerate dehydrogenase and related dehydrogenases 0.78 Psest_3384 glutamate 5-kinase — —
Pseudomonas segetis P6 0.89 ACVTMO_RS02840 serA phosphoglycerate dehydrogenase 0.85 ACVTMO_RS19550 proB glutamate 5-kinase — —
Variovorax sp. OAS795 0.80 ABID97_RS07235 phosphoglycerate dehydrogenase 0.56 ABID97_RS23400 glutamate 5-kinase — —
Acidovorax sp. GW101-3H11 0.79 Ac3H11_4790 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.55 Ac3H11_4771 Glutamate 5-kinase (EC 2.7.2.11) low > 79
Variovorax sp. SCN45 0.78 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.53 GFF2515 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA low > 127
Marinobacter adhaerens HP15 0.77 HP15_2554 D-3-phosphoglycerate dehydrogenase-like protein 0.62 HP15_508 gamma-glutamyl kinase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.75 GFF149 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.54 GFF1274 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.35 89
Shewanella sp. ANA-3 0.69 Shewana3_3416 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.37 Shewana3_0954 gamma-glutamyl kinase (RefSeq) 0.89 13
Shewanella oneidensis MR-1 0.69 SO0862 serA D-3-phosphoglycerate dehydrogenase (NCBI ptt file) 0.37 SO1121 proB glutamate 5-kinase (NCBI ptt file) 0.89 9
Shewanella amazonensis SB2B 0.69 Sama_2949 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.40 Sama_2516 gamma-glutamyl kinase (RefSeq) 0.88 20
Acinetobacter radioresistens SK82 0.69 MPMX26_02773 D-3-phosphoglycerate dehydrogenase 0.52 MPMX26_02135 Glutamate 5-kinase low > 36
Shewanella loihica PV-4 0.69 Shew_3196 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.40 Shew_2848 gamma-glutamyl kinase (RefSeq) 0.98 4
Acinetobacter baumannii LAC-4 0.68 RR41_RS01765 phosphoglycerate dehydrogenase 0.51 RR41_RS04980 glutamate 5-kinase low > 55
Klebsiella michiganensis M5al 0.68 BWI76_RS23920 D-3-phosphoglycerate dehydrogenase 0.39 BWI76_RS05840 glutamate 5-kinase 0.82 16
Alteromonas macleodii MIT1002 0.68 MIT1002_02993 D-3-phosphoglycerate dehydrogenase 0.31 MIT1002_04056 Glutamate 5-kinase low > 70
Dyella japonica UNC79MFTsu3.2 0.68 ABZR86_RS09635 phosphoglycerate dehydrogenase 0.32 ABZR86_RS08685 glutamate 5-kinase low > 74
Klebsiella pneumoniae MKP103 0.68 KDGMDA_04420 phosphoglycerate dehydrogenase 0.39 KDGMDA_14005 Glutamate 5-kinase low > 95
Enterobacter asburiae PDN3 0.67 EX28DRAFT_2965 Phosphoglycerate dehydrogenase and related dehydrogenases 0.40 EX28DRAFT_2651 glutamate 5-kinase — —
Enterobacter sp. TBS_079 0.67 MPMX20_03771 D-3-phosphoglycerate dehydrogenase 0.39 MPMX20_00927 Glutamate 5-kinase 0.89 15
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF3013 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.39 GFF4114 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA low > 78
Escherichia coli BW25113 0.67 b2913 serA D-3-phosphoglycerate dehydrogenase (NCBI) 0.40 b0242 proB gamma-glutamyl kinase (NCBI) 0.86 31
Escherichia coli ECRC99 0.67 KEDOAH_08680 serA phosphoglycerate dehydrogenase 0.40 KEDOAH_18480 proB Glutamate 5-kinase — —
Escherichia coli ECRC100 0.67 OKFHMN_19460 serA phosphoglycerate dehydrogenase 0.40 OKFHMN_09675 proB Glutamate 5-kinase 0.96 39
Escherichia coli Nissle 1917 0.67 ECOLIN_RS16210 phosphoglycerate dehydrogenase 0.40 ECOLIN_RS01825 glutamate 5-kinase 0.89 21
Escherichia coli ECRC62 0.67 BNILDI_09905 serA phosphoglycerate dehydrogenase 0.40 BNILDI_00245 proB Glutamate 5-kinase 0.92 53
Escherichia coli ECRC102 0.67 NIAGMN_17225 serA phosphoglycerate dehydrogenase 0.40 NIAGMN_07535 proB Glutamate 5-kinase 0.97 31
Escherichia coli ECOR38 0.67 HEPCGN_18760 serA phosphoglycerate dehydrogenase 0.40 HEPCGN_07780 proB Glutamate 5-kinase 0.92 38
Rhodanobacter denitrificans FW104-10B01 0.67 LRK54_RS03185 phosphoglycerate dehydrogenase 0.36 LRK54_RS02375 glutamate 5-kinase 0.68 35
Escherichia coli ECOR27 0.67 NOLOHH_11370 serA phosphoglycerate dehydrogenase 0.40 NOLOHH_02050 proB Glutamate 5-kinase 0.99 2
Escherichia coli BL21 0.67 ECD_02744 D-3-phosphoglycerate dehydrogenase 0.40 ECD_00239 gamma-glutamate kinase 0.89 27
Escherichia coli ECRC98 0.67 JDDGAC_23100 serA phosphoglycerate dehydrogenase 0.40 JDDGAC_13300 proB Glutamate 5-kinase low > 87
Escherichia coli ECRC101 0.67 MCAODC_09980 serA phosphoglycerate dehydrogenase 0.40 MCAODC_00195 proB Glutamate 5-kinase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_00803 D-3-phosphoglycerate dehydrogenase 0.40 OHPLBJKB_03398 Glutamate 5-kinase low > 74
Escherichia fergusonii Becca 0.67 EFB2_00990 D-3-phosphoglycerate dehydrogenase 0.40 EFB2_03778 Glutamate 5-kinase low > 86
Serratia liquefaciens MT49 0.67 IAI46_20900 phosphoglycerate dehydrogenase 0.38 IAI46_04430 glutamate 5-kinase 0.72 42
Erwinia tracheiphila HP pepo 2.2 0.67 IJEDHG_03320 D-3-phosphoglycerate dehydrogenase 0.38 IJEDHG_15490 proB Glutamate 5-kinase 0.81 31
Erwinia amylovora T8 0.67 OLJFJH_08735 phosphoglycerate dehydrogenase 0.38 OLJFJH_18410 Glutamate 5-kinase — —
Rhodanobacter denitrificans MT42 0.67 LRK55_RS02935 phosphoglycerate dehydrogenase 0.36 LRK55_RS02130 glutamate 5-kinase low > 63
Erwinia tracheiphila SCR3 0.67 LU632_RS05855 serA phosphoglycerate dehydrogenase 0.38 LU632_RS01185 proB glutamate 5-kinase 0.77 7
Rhodanobacter sp000427505 FW510-R12 0.66 LRK53_RS06795 phosphoglycerate dehydrogenase 0.32 LRK53_RS07570 glutamate 5-kinase 0.55 33
Rhodanobacter sp. FW510-T8 0.66 OKGIIK_10055 serA phosphoglycerate dehydrogenase 0.34 OKGIIK_09420 proB glutamate 5-kinase 0.77 45
Rahnella sp. WP5 0.66 EX31_RS21470 phosphoglycerate dehydrogenase 0.39 EX31_RS20980 glutamate 5-kinase 0.85 9
Pantoea sp. MT58 0.66 IAI47_03725 phosphoglycerate dehydrogenase 0.40 IAI47_15120 glutamate 5-kinase 0.87 35
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS15975 phosphoglycerate dehydrogenase 0.41 PagCFBP13505_RS10040 glutamate 5-kinase low > 74
Dickeya dianthicola ME23 0.65 DZA65_RS19540 phosphoglycerate dehydrogenase 0.36 DZA65_RS17695 glutamate 5-kinase low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS18400 phosphoglycerate dehydrogenase 0.36 HGI48_RS16605 glutamate 5-kinase low > 71
Dickeya dadantii 3937 0.65 DDA3937_RS18480 phosphoglycerate dehydrogenase 0.36 DDA3937_RS16535 glutamate 5-kinase low > 74
Pectobacterium carotovorum WPP14 0.65 HER17_RS02725 phosphoglycerate dehydrogenase 0.37 HER17_RS04700 glutamate 5-kinase 0.88 31
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.2931.1 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.31 Xcc-8004.2326.1 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.65 70
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_12555 phosphoglycerate dehydrogenase 0.37 CSW01_11575 glutamate 5-kinase low > 62
Lysobacter sp. OAE881 0.62 ABIE51_RS13245 phosphoglycerate dehydrogenase 0.30 ABIE51_RS13370 glutamate 5-kinase low > 62
Azospirillum sp. SherDot2 0.60 MPMX19_00753 D-3-phosphoglycerate dehydrogenase 0.41 MPMX19_01933 Glutamate 5-kinase — —
Rhizobium sp. OAE497 0.59 ABIE40_RS30040 phosphoglycerate dehydrogenase 0.39 ABIE40_RS18920 glutamate 5-kinase low > 107
Azospirillum brasilense Sp245 0.59 AZOBR_RS10940 3-phosphoglycerate dehydrogenase 0.39 AZOBR_RS04095 glutamate 5-kinase — —
Rhodospirillum rubrum S1H 0.58 Rru_A2456 Phosphoglycerate dehydrogenase (NCBI) 0.38 Rru_A1239 Glutamate 5-kinase, ProB-related (NCBI) — —
Xanthobacter sp. DMC5 0.56 GFF4356 D-3-phosphoglycerate dehydrogenase 0.40 GFF3944 Glutamate 5-kinase — —
Bosea sp. OAE506 0.55 ABIE41_RS08410 phosphoglycerate dehydrogenase 0.37 ABIE41_RS07585 glutamate 5-kinase — —
Castellaniella sp019104865 MT123 0.50 ABCV34_RS15150 phosphoglycerate dehydrogenase 0.58 ABCV34_RS10800 glutamate 5-kinase low > 48
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS27010 D-3-phosphoglycerate dehydrogenase 0.57 RR42_RS17940 gamma-glutamyl kinase low > 128
Bifidobacterium breve UCC2003 0.44 BBR_RS16970 phosphoglycerate dehydrogenase 0.32 BBR_RS19445 glutamate 5-kinase low > 34

Not shown: 1 genomes with orthologs for Psyr_4852 only; 38 genomes with orthologs for Psyr_0704 only