Conservation of cofitness between PfGW456L13_1351 and PfGW456L13_4854 in Pseudomonas fluorescens GW456-L13

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens GW456-L13 1.0 PfGW456L13_1351 LrgA-associated membrane protein LrgB 1.0 PfGW456L13_4854 2-isopropylmalate synthase (EC 2.3.3.13) 0.39 13
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_2683 LrgA-associated membrane protein LrgB 0.98 Pf1N1B4_847 2-isopropylmalate synthase (EC 2.3.3.13) 0.34 26
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_06515 hypothetical protein 0.98 AO353_15925 2-isopropylmalate synthase low > 101
Pseudomonas simiae WCS417 0.92 PS417_24765 membrane protein 0.94 PS417_23110 2-isopropylmalate synthase 0.40 36
Pseudomonas sp. RS175 0.91 PFR28_03876 Inner membrane protein YohK 0.95 PFR28_00305 2-isopropylmalate synthase low > 88
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_15270 hypothetical protein 0.94 AO356_06550 2-isopropylmalate synthase low > 104
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS26700 LrgB family protein 0.94 PFLU_RS24765 2-isopropylmalate synthase low > 109
Pseudomonas fluorescens SBW25 0.90 PFLU_RS26700 LrgB family protein 0.94 PFLU_RS24765 2-isopropylmalate synthase low > 109
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_4989 LrgA-associated membrane protein LrgB 0.94 Pf6N2E2_3170 2-isopropylmalate synthase (EC 2.3.3.13) low > 103
Pseudomonas putida KT2440 0.87 PP_4815 putative Membrane protein 0.90 PP_1025 2-isopropylmalate synthase low > 96
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_0637 LrgB-like protein 0.89 Psyr_1257 2-isopropylmalate synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_0637 LrgB-like protein 0.89 Psyr_1257 2-isopropylmalate synthase low > 86
Pseudomonas sp. S08-1 0.73 OH686_09360 LrgA-associated membrane protein LrgB 0.77 OH686_17570 2-isopropylmalate synthase low > 80
Pseudomonas stutzeri RCH2 0.72 Psest_0505 Putative effector of murein hydrolase 0.82 Psest_1277 2-isopropylmalate synthase, yeast type low > 67
Azospirillum brasilense Sp245 0.38 AZOBR_RS12150 membrane protein 0.55 AZOBR_RS12155 2-isopropylmalate synthase low > 97
Dechlorosoma suillum PS 0.38 Dsui_0028 putative effector of murein hydrolase 0.59 Dsui_3227 2-isopropylmalate synthase low > 51
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_02851 TIGR00659 family protein 0.63 H281DRAFT_00385 2-isopropylmalate synthase — —
Paraburkholderia graminis OAS925 0.37 ABIE53_005942 putative murein hydrolase (TIGR00659 family) 0.63 ABIE53_002867 2-isopropylmalate synthase low > 113
Marinobacter adhaerens HP15 0.37 HP15_2943 LrgB family protein 0.52 HP15_2055 2-isopropylmalate synthase low > 73
Azospirillum sp. SherDot2 0.35 MPMX19_01820 Inner membrane protein YohK 0.57 MPMX19_01822 2-isopropylmalate synthase low > 112
Ralstonia solanacearum UW163 0.35 UW163_RS08115 LrgB family protein 0.64 UW163_RS17345 2-isopropylmalate synthase — —
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS05510 LrgB family protein 0.64 RALBFv3_RS21840 2-isopropylmalate synthase low > 76
Magnetospirillum magneticum AMB-1 0.34 AMB_RS06665 LrgB family protein 0.56 AMB_RS17550 2-isopropylmalate synthase low > 64
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS26565 membrane protein 0.64 BPHYT_RS13280 2-isopropylmalate synthase — —
Variovorax sp. OAS795 0.34 ABID97_RS17375 LrgB family protein 0.59 ABID97_RS14905 2-isopropylmalate synthase low > 91
Ralstonia solanacearum GMI1000 0.33 RS_RS13370 LrgB family protein 0.62 RS_RS18695 2-isopropylmalate synthase 2 low > 80
Rhodospirillum rubrum S1H 0.33 Rru_A2427 LrgB-like protein (NCBI) 0.55 Rru_A1928 Yeast 2-isopropylmalate synthase (NCBI) low > 58
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS14495 membrane protein 0.67 HSERO_RS17185 2-isopropylmalate synthase low > 78
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS17325 membrane protein 0.62 RR42_RS21205 2-isopropylmalate synthase low > 128
Variovorax sp. SCN45 0.32 GFF436 LrgA-associated membrane protein LrgB 0.59 GFF1164 2-isopropylmalate synthase (EC 2.3.3.13) low > 127
Parabacteroides merdae CL09T00C40 0.32 HMPREF1078_RS04920 LrgB family protein 0.13 HMPREF1078_RS16665 2-isopropylmalate synthase low > 61
Escherichia coli Nissle 1917 0.31 ECOLIN_RS12540 CidB/LrgB family autolysis modulator 0.09 ECOLIN_RS00400 2-isopropylmalate synthase low > 55
Dickeya dianthicola ME23 0.31 DZA65_RS08945 CidB/LrgB family autolysis modulator 0.11 DZA65_RS19200 2-isopropylmalate synthase low > 75
Ralstonia solanacearum PSI07 0.31 RPSI07_RS11790 LrgB family protein 0.64 RPSI07_RS01320 2-isopropylmalate synthase low > 81
Dickeya dianthicola 67-19 0.31 HGI48_RS08655 CidB/LrgB family autolysis modulator 0.11 HGI48_RS18055 2-isopropylmalate synthase low > 71
Escherichia coli BL21 0.31 ECD_02071 LrgB family inner membrane protein 0.09 ECD_00076 2-isopropylmalate synthase low > 61
Escherichia coli ECRC100 0.31 OKFHMN_23575 yohK CidB/LrgB family autolysis modulator 0.09 OKFHMN_10715 2-isopropylmalate synthase low > 80
Escherichia coli ECRC99 0.31 KEDOAH_04610 yohK CidB/LrgB family autolysis modulator 0.09 KEDOAH_17440 2-isopropylmalate synthase — —
Escherichia fergusonii Becca 0.31 EFB2_01714 Inner membrane protein YohK 0.09 EFB2_03971 2-isopropylmalate synthase low > 86
Escherichia coli BW25113 0.31 b2142 yohK predicted inner membrane protein (NCBI) 0.09 b0074 leuA 2-isopropylmalate synthase (NCBI) low > 76
Escherichia coli ECRC98 0.31 JDDGAC_27530 yohK CidB/LrgB family autolysis modulator 0.09 JDDGAC_14310 2-isopropylmalate synthase low > 86
Escherichia coli ECOR27 0.31 NOLOHH_15145 yohK CidB/LrgB family autolysis modulator 0.09 NOLOHH_03060 2-isopropylmalate synthase low > 75
Escherichia coli ECRC62 0.31 BNILDI_14065 yohK CidB/LrgB family autolysis modulator 0.09 BNILDI_08550 2-isopropylmalate synthase low > 75
Escherichia coli ECRC101 0.31 MCAODC_14625 yohK CidB/LrgB family autolysis modulator 0.09 MCAODC_01230 2-isopropylmalate synthase low > 87
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS01160 LrgB family protein 0.63 ABZR87_RS22365 2-isopropylmalate synthase low > 80
Escherichia coli ECRC102 0.31 NIAGMN_21340 yohK CidB/LrgB family autolysis modulator 0.09 NIAGMN_08565 2-isopropylmalate synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_01569 Inner membrane protein YohK 0.09 OHPLBJKB_03583 2-isopropylmalate synthase low > 73
Escherichia coli ECOR38 0.31 HEPCGN_22840 yohK CidB/LrgB family autolysis modulator 0.09 HEPCGN_08695 2-isopropylmalate synthase low > 87
Pectobacterium carotovorum WPP14 0.30 HER17_RS13480 CidB/LrgB family autolysis modulator 0.10 HER17_RS03085 2-isopropylmalate synthase 0.79 24
Dinoroseobacter shibae DFL-12 0.30 Dshi_0156 LrgB family protein (RefSeq) 0.09 Dshi_0596 2-isopropylmalate synthase (RefSeq) low > 64
Klebsiella michiganensis M5al 0.30 BWI76_RS19605 CidB/LrgB family autolysis modulator 0.53 BWI76_RS22105 2-isopropylmalate synthase low > 92
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS08495 LrgB family protein 0.11 HMPREF1058_RS14545 2-isopropylmalate synthase low > 67
Bacteroides thetaiotaomicron VPI-5482 0.30 BT3690 putative membrane protein (NCBI ptt file) 0.10 BT1861 2-isopropylmalate synthase (EC 2.3.3.13) (from data) low > 81
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS02720 LrgB family protein 0.11 ABI39_RS10195 2-isopropylmalate synthase low > 72
Enterobacter sp. TBS_079 0.30 MPMX20_03114 Inner membrane protein YohK 0.55 MPMX20_03565 2-isopropylmalate synthase low > 85
Dickeya dadantii 3937 0.30 DDA3937_RS08490 CidB/LrgB family autolysis modulator 0.50 DDA3937_RS02895 2-isopropylmalate synthase low > 74
Pantoea sp. MT58 0.29 IAI47_06765 CidB/LrgB family autolysis modulator 0.52 IAI47_10235 2-isopropylmalate synthase low > 76
Rahnella sp. WP5 0.29 EX31_RS11260 CidB/LrgB family autolysis modulator 0.56 EX31_RS24130 2-isopropylmalate synthase low > 89
Bacteroides stercoris CC31F 0.29 HMPREF1181_RS03185 LrgB family protein 0.11 HMPREF1181_RS14150 2-isopropylmalate synthase low > 56
Enterobacter asburiae PDN3 0.29 EX28DRAFT_0413 TIGR00659 family protein 0.56 EX28DRAFT_2770 2-isopropylmalate synthase, yeast type low > 76
Erwinia tracheiphila SCR3 0.29 LU632_RS08560 CidB/LrgB family autolysis modulator 0.10 LU632_RS02880 leuA 2-isopropylmalate synthase low > 74
Bosea sp. OAE506 0.29 ABIE41_RS15710 LrgB family protein 0.10 ABIE41_RS13000 2-isopropylmalate synthase low > 77
Bacteroides ovatus ATCC 8483 0.29 BACOVA_03497 putative TIGR00659 family protein 0.10 BACOVA_04604 2-isopropylmalate synthase low > 94
Serratia liquefaciens MT49 0.28 IAI46_07945 CidB/LrgB family autolysis modulator 0.57 IAI46_09630 2-isopropylmalate synthase low > 86
Rhodopseudomonas palustris CGA009 0.26 TX73_002825 LrgB family protein 0.56 TX73_024250 2-isopropylmalate synthase 0.46 69
Vibrio cholerae E7946 ATCC 55056 0.25 CSW01_06230 LrgB family protein 0.10 CSW01_12595 2-isopropylmalate synthase low > 62
Acinetobacter radioresistens SK82 0.20 MPMX26_00599 Holin-like protein CidB 0.59 MPMX26_00404 2-isopropylmalate synthase low > 36
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF4840 LrgA-associated membrane protein LrgB 0.61 GFF4280 2-isopropylmalate synthase (EC 2.3.3.13) low > 90
Shewanella loihica PV-4 0.19 Shew_0830 LrgB family protein (RefSeq) 0.09 Shew_3472 2-isopropylmalate synthase (RefSeq) low > 60
Paraburkholderia sabiae LMG 24235 0.18 QEN71_RS28735 LrgB family protein 0.56 QEN71_RS01640 2-isopropylmalate synthase low > 153
Shewanella oneidensis MR-1 0.13 SO1048 membrane protein, putative (NCBI ptt file) 0.09 SO4236 leuA 2-isopropylmalate synthase (NCBI ptt file) low > 76

Not shown: 2 genomes with orthologs for PfGW456L13_1351 only; 26 genomes with orthologs for PfGW456L13_4854 only