Conservation of cofitness between Pf6N2E2_5594 and Pf6N2E2_4474 in Pseudomonas fluorescens FW300-N2E2

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E2 1.0 Pf6N2E2_5594 Endonuclease III (EC 4.2.99.18) 1.0 Pf6N2E2_4474 FIG006231: RNA-binding protein 0.49 1
Pseudomonas fluorescens FW300-N2C3 0.99 AO356_18345 endonuclease III 0.91 AO356_12985 hypothetical protein low > 104
Pseudomonas sp. RS175 0.98 PFR28_03349 Endonuclease III 0.88 PFR28_04327 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_739 Endonuclease III (EC 4.2.99.18) 0.88 Pf1N1B4_2223 FIG006231: RNA-binding protein low > 87
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_1753 Endonuclease III (EC 4.2.99.18) 0.89 PfGW456L13_890 FIG006231: RNA-binding protein 0.45 3
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_04085 endonuclease III 0.86 AO353_08785 hypothetical protein low > 101
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS05740 endonuclease III 0.86 PFLU_RS28970 EVE domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.95 PFLU_RS05740 endonuclease III 0.86 PFLU_RS28970 EVE domain-containing protein low > 109
Pseudomonas simiae WCS417 0.95 PS417_05655 endonuclease III 0.87 PS417_27315 hypothetical protein low > 88
Pseudomonas putida KT2440 0.93 PP_1092 DNA glycosylase/apyrimidinic (AP) lyase specific for damaged pyrimidinic sites 0.82 PP_5205 conserved protein of unknown function low > 96
Pseudomonas sp. S08-1 0.92 OH686_03910 endonuclease III 0.75 OH686_11235 Protein of unknown function DUF55 low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_3888 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase 0.79 Psyr_0315 Protein of unknown function DUF589 low > 86
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_3888 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase 0.79 Psyr_0315 Protein of unknown function DUF589 low > 86
Pseudomonas stutzeri RCH2 0.89 Psest_3118 endonuclease III 0.68 Psest_0168 Uncharacterized conserved protein 0.36 12
Marinobacter adhaerens HP15 0.81 HP15_1285 endonuclease III 0.52 HP15_2975 protein belonging to uncharacterized protein family UPF0310 low > 73
Kangiella aquimarina DSM 16071 0.80 B158DRAFT_2365 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18)/endonuclease III (EC 3.2.2.-) 0.47 B158DRAFT_0526 Uncharacterized conserved protein low > 40
Shewanella oneidensis MR-1 0.74 SO2514 nth endonuclease III (NCBI ptt file) 0.51 SO1969 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.73 Sama_1836 endonuclease III (RefSeq) 0.46 Sama_1573 hypothetical protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.72 Shewana3_2174 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III (RefSeq) 0.51 Shewana3_2477 hypothetical protein (RefSeq) 0.31 17
Rhodanobacter denitrificans MT42 0.72 LRK55_RS01640 endonuclease III 0.53 LRK55_RS11390 EVE domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.72 LRK54_RS01850 endonuclease III 0.53 LRK54_RS11665 EVE domain-containing protein low > 59
Cupriavidus basilensis FW507-4G11 0.71 RR42_RS05970 endonuclease III 0.46 RR42_RS16155 RNA-binding protein 0.39 65
Dechlorosoma suillum PS 0.71 Dsui_2985 endonuclease III 0.48 Dsui_0525 hypothetical protein low > 51
Dyella japonica UNC79MFTsu3.2 0.71 ABZR86_RS08185 endonuclease III 0.52 ABZR86_RS12000 EVE domain-containing protein 0.54 5
Rhodanobacter sp. FW510-T8 0.71 OKGIIK_04675 nth endonuclease III 0.52 OKGIIK_12230 eVE EVE domain-containing protein low > 52
Ralstonia solanacearum PSI07 0.70 RPSI07_RS19265 endonuclease III 0.46 RPSI07_RS12860 EVE domain-containing protein low > 81
Xanthomonas campestris pv. campestris strain 8004 0.70 Xcc-8004.3350.1 Endonuclease III (EC 4.2.99.18) 0.49 Xcc-8004.1137.1 FIG006231: RNA-binding protein low > 74
Ralstonia sp. UNC404CL21Col 0.70 ABZR87_RS09915 endonuclease III 0.47 ABZR87_RS00115 EVE domain-containing protein low > 80
Ralstonia solanacearum GMI1000 0.70 RS_RS04975 endonuclease III 0.47 RS_RS12065 EVE domain-containing protein low > 80
Ralstonia solanacearum UW163 0.70 UW163_RS11660 endonuclease III 0.46 UW163_RS09155 EVE domain-containing protein — —
Ralstonia solanacearum IBSBF1503 0.70 RALBFv3_RS14195 endonuclease III 0.46 RALBFv3_RS04515 EVE domain-containing protein low > 76
Paraburkholderia sabiae LMG 24235 0.69 QEN71_RS24560 endonuclease III 0.45 QEN71_RS25165 EVE domain-containing protein low > 153
Variovorax sp. SCN45 0.69 GFF418 Endonuclease III (EC 4.2.99.18) 0.42 GFF3613 Protein of unknown function DUF55 0.39 113
Paraburkholderia graminis OAS925 0.68 ABIE53_001423 endonuclease-3 0.45 ABIE53_001243 putative RNA-binding protein with PUA-like domain low > 113
Acidovorax sp. GW101-3H11 0.68 Ac3H11_1010 Endonuclease III (EC 4.2.99.18) 0.42 Ac3H11_2176 FIG006231: RNA-binding protein low > 79
Paraburkholderia bryophila 376MFSha3.1 0.68 H281DRAFT_00293 DNA-(apurinic or apyrimidinic site) lyase /endonuclease III 0.45 H281DRAFT_00131 Predicted RNA-binding protein, contains PUA-like domain low > 103
Variovorax sp. OAS795 0.67 ABID97_RS17315 endonuclease III 0.43 ABID97_RS00760 EVE domain-containing protein 0.43 18
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS06080 endonuclease IV 0.45 BPHYT_RS04835 hypothetical protein low > 109
Lysobacter sp. OAE881 0.67 ABIE51_RS07560 endonuclease III 0.45 ABIE51_RS17360 EVE domain-containing protein low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.67 GFF4003 Endonuclease III (EC 4.2.99.18) 0.42 GFF4019 FIG006231: RNA-binding protein low > 90
Azospirillum sp. SherDot2 0.63 MPMX19_02500 Endonuclease III 0.31 MPMX19_02040 hypothetical protein low > 112
Azospirillum brasilense Sp245 0.62 AZOBR_RS01565 endonuclease III 0.27 AZOBR_RS00280 ubiquinol-cytochrome C reductase 0.61 12
Bosea sp. OAE506 0.59 ABIE41_RS03410 endonuclease III 0.24 ABIE41_RS05665 EVE domain-containing protein low > 77
Sphingomonas koreensis DSMZ 15582 0.59 Ga0059261_2546 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18)/endonuclease III (EC 3.2.2.-) 0.31 Ga0059261_3162 Uncharacterized conserved protein low > 68
Magnetospirillum magneticum AMB-1 0.58 AMB_RS21105 endonuclease III 0.31 AMB_RS21130 EVE domain-containing protein low > 64
Rhodospirillum rubrum S1H 0.58 Rru_A0153 Endonuclease III/Nth (NCBI) 0.29 Rru_A3573 Protein of unknown function DUF589 (NCBI) — —
Dinoroseobacter shibae DFL-12 0.57 Dshi_3023 endonuclease III (RefSeq) 0.31 Dshi_3412 protein of unknown function DUF55 (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.56 PGA1_c29040 endonuclease III 0.36 PGA1_c35460 Uncharacterized conserved protein low > 62
Pontibacter actiniarum KMM 6156, DSM 19842 0.45 CA264_14955 endonuclease III 0.35 CA264_20480 ubiquinol-cytochrome C reductase 0.51 10
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS16725 endonuclease III 0.34 ABZR88_RS00920 EVE domain-containing protein low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS00605 endonuclease III 0.34 CA265_RS14075 ubiquinol-cytochrome C reductase low > 88
Synechococcus elongatus PCC 7942 0.32 Synpcc7942_0447 nth DNA-(apurinic or apyrimidinic site) lyase / endonuclease III 0.42 Synpcc7942_0953 hypothetical protein low > 38
Alteromonas macleodii MIT1002 0.32 MIT1002_01251 Endonuclease III 0.49 MIT1002_01794 EVE domain protein low > 70

Not shown: 43 genomes with orthologs for Pf6N2E2_5594 only; 6 genomes with orthologs for Pf6N2E2_4474 only