Conservation of cofitness between PP_1912 and PP_5303 in Pseudomonas putida KT2440

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1912 Phosphate acyltransferase 1.0 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase 0.47 1
Pseudomonas fluorescens SBW25 0.88 PFLU_RS23065 phosphate acyltransferase PlsX 0.97 PFLU_RS29515 RidA family protein 0.73 2
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS23065 phosphate acyltransferase PlsX 0.97 PFLU_RS29515 RidA family protein 0.45 3
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_01375 phosphate acyltransferase 0.97 AO353_09285 reactive intermediate/imine deaminase 0.54 29
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_2103 Phosphate:acyl-ACP acyltransferase PlsX 0.97 PfGW456L13_779 Bona fide RidA/YjgF/TdcF/RutC subgroup 0.64 46
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_453 Phosphate:acyl-ACP acyltransferase PlsX 0.98 Pf1N1B4_2112 Bona fide RidA/YjgF/TdcF/RutC subgroup — —
Pseudomonas simiae WCS417 0.86 PS417_21450 phosphate acyltransferase 0.97 PS417_27835 endoribonuclease — —
Pseudomonas sp. RS175 0.85 PFR28_03012 Phosphate acyltransferase 0.98 PFR28_04425 2-iminobutanoate/2-iminopropanoate deaminase 0.59 1
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_20155 phosphate acyltransferase 0.97 AO356_12475 reactive intermediate/imine deaminase 0.34 72
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_1645 phosphate:acyl-[acyl carrier protein] acyltransferase 0.89 Psyr_0208 endoribonuclease L-PSP low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_1645 phosphate:acyl-[acyl carrier protein] acyltransferase 0.89 Psyr_0208 endoribonuclease L-PSP low > 86
Pseudomonas sp. S08-1 0.78 OH686_22130 fatty acid/phospholipid synthesis protein PlsX 0.93 OH686_13545 RidA/YER057c/UK114 superfamily protein low > 80
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_5950 Phosphate:acyl-ACP acyltransferase PlsX 0.97 Pf6N2E2_4360 Bona fide RidA/YjgF/TdcF/RutC subgroup 0.32 71
Pseudomonas stutzeri RCH2 0.67 Psest_1686 fatty acid/phospholipid synthesis protein PlsX 0.90 Psest_3818 endoribonuclease L-PSP, putative 0.57 5
Marinobacter adhaerens HP15 0.50 HP15_2215 fatty acid/phospholipid synthesis protein PlsX 0.71 HP15_306 YjgF-like protein — —
Shewanella loihica PV-4 0.50 Shew_1600 putative glycerol-3-phosphate acyltransferase PlsX (RefSeq) 0.73 Shew_3500 putative endoribonuclease L-PSP (RefSeq) — —
Shewanella oneidensis MR-1 0.49 SO2779 plsX fatty acid/phospholipid synthesis protein PlsX (NCBI ptt file) 0.73 SO0358 endoribonuclease L-PSP, putative (NCBI ptt file) — —
Shewanella sp. ANA-3 0.48 Shewana3_2561 putative glycerol-3-phosphate acyltransferase PlsX (RefSeq) 0.73 Shewana3_3813 putative endoribonuclease L-PSP (RefSeq) — —
Alteromonas macleodii MIT1002 0.47 MIT1002_01730 Phosphate acyltransferase 0.71 MIT1002_00109 Putative reactive intermediate deaminase TdcF low > 70
Dechlorosoma suillum PS 0.47 Dsui_2445 fatty acid/phospholipid synthesis protein PlsX 0.78 Dsui_0312 endoribonuclease L-PSP, putative — —
Paraburkholderia graminis OAS925 0.46 ABIE53_003050 glycerol-3-phosphate acyltransferase PlsX 0.27 ABIE53_004706 2-iminobutanoate/2-iminopropanoate deaminase — —
Shewanella amazonensis SB2B 0.46 Sama_1983 putative glycerol-3-phosphate acyltransferase PlsX (RefSeq) 0.79 Sama_0263 YjgF-like protein (RefSeq) — —
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS04540 phosphate acyltransferase PlsX 0.48 QEN71_RS41190 RidA family protein — —
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS14440 phosphate acyltransferase 0.29 BPHYT_RS29300 endoribonuclease L-PSP — —
Ralstonia solanacearum UW163 0.45 UW163_RS11880 phosphate acyltransferase PlsX 0.37 UW163_RS22060 endoribonuclease L-PSP — —
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS14415 phosphate acyltransferase PlsX 0.37 RALBFv3_RS20925 endoribonuclease L-PSP — —
Pectobacterium carotovorum WPP14 0.45 HER17_RS08635 phosphate acyltransferase PlsX 0.43 HER17_RS19520 2-iminobutanoate/2-iminopropanoate deaminase low > 75
Dickeya dianthicola ME23 0.45 DZA65_RS13670 phosphate acyltransferase PlsX 0.41 DZA65_RS01960 2-iminobutanoate/2-iminopropanoate deaminase low > 75
Dickeya dianthicola 67-19 0.45 HGI48_RS13200 phosphate acyltransferase PlsX 0.41 HGI48_RS01890 2-iminobutanoate/2-iminopropanoate deaminase — —
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_04348 phosphate:acyl-[acyl carrier protein] acyltransferase 0.36 H281DRAFT_01079 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family — —
Dickeya dadantii 3937 0.45 DDA3937_RS13135 phosphate acyltransferase PlsX 0.42 DDA3937_RS01915 2-iminobutanoate/2-iminopropanoate deaminase low > 74
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS10130 phosphate acyltransferase PlsX 0.29 ABZR87_RS05790 RidA family protein — —
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_10110 phosphate acyltransferase 0.43 CSW01_12735 RidA family protein — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF3332 Phosphate:acyl-ACP acyltransferase PlsX 0.27 GFF3622 Bona fide RidA/YjgF/TdcF/RutC subgroup — —
Enterobacter asburiae PDN3 0.44 EX28DRAFT_1839 phosphate:acyl-[acyl carrier protein] acyltransferase 0.39 EX28DRAFT_3444 reactive intermediate/imine deaminase low > 76
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_1756 phosphate:acyl-[acyl carrier protein] acyltransferase 0.77 B158DRAFT_0573 endoribonuclease L-PSP, putative — —
Enterobacter sp. TBS_079 0.44 MPMX20_01770 Phosphate acyltransferase 0.40 MPMX20_00542 2-iminobutanoate/2-iminopropanoate deaminase low > 85
Klebsiella michiganensis M5al 0.43 BWI76_RS11075 phosphate acyltransferase 0.42 BWI76_RS02985 reactive intermediate/imine deaminase — —
Escherichia coli BL21 0.43 ECD_01086 putative phosphate acyltransferase 0.42 ECD_02980 putative reactive intermediate deaminase — —
Escherichia coli Nissle 1917 0.43 ECOLIN_RS06300 phosphate acyltransferase PlsX 0.42 ECOLIN_RS17920 enamine/imine deaminase low > 52
Serratia liquefaciens MT49 0.43 IAI46_09775 phosphate acyltransferase PlsX 0.39 IAI46_02265 2-iminobutanoate/2-iminopropanoate deaminase 0.57 38
Variovorax sp. SCN45 0.43 GFF3856 Phosphate:acyl-ACP acyltransferase PlsX (EC 2.3.1.n2) 0.32 GFF3442 RidA/YER057c/UK114 superfamily protein — —
Pantoea sp. MT58 0.43 IAI47_12085 phosphate acyltransferase PlsX 0.41 IAI47_16870 2-iminobutanoate/2-iminopropanoate deaminase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF3372 Phosphate:acyl-ACP acyltransferase PlsX 0.43 GFF928 Endoribonuclease L-PSP low > 78
Escherichia coli BW25113 0.43 b1090 plsX glycerolphosphate auxotrophy in plsB background (VIMSS) 0.42 b3113 yhaR orf, hypothetical protein (VIMSS) low > 76
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS14115 phosphate acyltransferase 0.33 RR42_RS16710 endoribonuclease L-PSP — —
Rahnella sp. WP5 0.43 EX31_RS24420 phosphate acyltransferase PlsX 0.43 EX31_RS12775 2-iminobutanoate/2-iminopropanoate deaminase low > 89
Escherichia coli ECRC62 0.42 BNILDI_19280 plsX phosphate acyltransferase PlsX 0.42 BNILDI_01325 tdcF enamine/imine deaminase — —
Escherichia coli ECRC98 0.42 JDDGAC_07250 plsX phosphate acyltransferase PlsX 0.42 JDDGAC_22055 tdcF enamine/imine deaminase — —
Escherichia coli ECOR27 0.42 NOLOHH_21120 plsX phosphate acyltransferase PlsX 0.42 NOLOHH_10200 tdcF enamine/imine deaminase low > 57
Escherichia coli ECRC101 0.42 OKFHMN_03590 plsX phosphate acyltransferase PlsX 0.42 OKFHMN_18420 tdcF enamine/imine deaminase — —
Escherichia coli ECRC101 0.42 MCAODC_22950 plsX phosphate acyltransferase PlsX 0.42 MCAODC_08935 tdcF enamine/imine deaminase — —
Escherichia coli ECRC102 0.42 NIAGMN_24240 plsX phosphate acyltransferase PlsX 0.42 NIAGMN_16185 tdcF enamine/imine deaminase — —
Escherichia coli ECRC99 0.42 KEDOAH_24165 plsX phosphate acyltransferase PlsX 0.42 KEDOAH_09725 tdcF enamine/imine deaminase — —
Escherichia fergusonii Becca 0.42 EFB2_02885 Phosphate acyltransferase 0.42 EFB2_00701 Putative reactive intermediate deaminase TdcF low > 86
Escherichia coli ECOR38 0.42 HEPCGN_23890 plsX phosphate acyltransferase PlsX 0.42 HEPCGN_17255 tdcF enamine/imine deaminase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_02576 Phosphate acyltransferase 0.42 OHPLBJKB_00587 Putative reactive intermediate deaminase TdcF low > 73
Erwinia tracheiphila SCR3 0.41 LU632_RS14835 plsX phosphate acyltransferase PlsX 0.40 LU632_RS20960 ridA 2-iminobutanoate/2-iminopropanoate deaminase low > 74
Azospirillum sp. SherDot2 0.38 MPMX19_00741 Phosphate acyltransferase 0.31 MPMX19_04018 2-aminomuconate deaminase — —
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_01431 fatty acid/phospholipid synthesis protein plsX 0.30 CCNA_02886 RutC-family pyrimidine utilization protein C — —
Caulobacter crescentus NA1000 0.38 CCNA_01431 fatty acid/phospholipid synthesis protein plsX 0.30 CCNA_02886 RutC-family pyrimidine utilization protein C — —
Azospirillum brasilense Sp245 0.38 AZOBR_RS10085 phosphate acyltransferase 0.44 AZOBR_RS32435 dfrA — —
Desulfovibrio vulgaris Hildenborough JW710 0.37 DVU1208 plsX fatty acid/phospholipid synthesis protein PlsX (TIGR) 0.48 DVU2647 endoribonuclease, L-PSP family (TIGR) — —
Dinoroseobacter shibae DFL-12 0.36 Dshi_1719 fatty acid/phospholipid synthesis protein PlsX (RefSeq) 0.30 Dshi_0720 Endoribonuclease L-PSP (RefSeq) — —
Desulfovibrio vulgaris Miyazaki F 0.36 DvMF_3102 putative glycerol-3-phosphate acyltransferase PlsX (RefSeq) 0.34 DvMF_1512 endoribonuclease L-PSP (RefSeq) — —
Bosea sp. OAE506 0.32 ABIE41_RS19695 phosphate acyltransferase PlsX 0.22 ABIE41_RS11850 RidA family protein — —
Fusobacterium nucleatum SB010 0.31 HUW76_02225 phosphate acyltransferase PlsX 0.45 HUW76_10065 RidA family protein — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.29 ABZR88_RS00155 phosphate acyltransferase PlsX 0.41 ABZR88_RS17245 RidA family protein — —
Synechococcus elongatus PCC 7942 0.28 Synpcc7942_1454 plsX fatty acid/phospholipid synthesis protein 0.45 Synpcc7942_0972 YjgF-like protein — —
Pedobacter sp. GW460-11-11-14-LB5 0.27 CA265_RS18350 phosphate acyltransferase PlsX 0.45 CA265_RS22825 reactive intermediate/imine deaminase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_03825 phosphate acyltransferase PlsX 0.43 CA264_17590 RidA family protein — —

Not shown: 14 genomes with orthologs for PP_1912 only; 16 genomes with orthologs for PP_5303 only