Conservation of cofitness between PP_1620 and PP_5229 in Pseudomonas putida KT2440

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1620 5'(3')-nucleotidase and polyphosphatase 1.0 PP_5229 conserved protein of unknown function 0.23 7
Pseudomonas fluorescens SBW25-INTG 0.86 PFLU_RS06415 5'/3'-nucleotidase SurE 0.74 PFLU_RS29275 DUF484 family protein 0.48 2
Pseudomonas fluorescens SBW25 0.86 PFLU_RS06415 5'/3'-nucleotidase SurE 0.74 PFLU_RS29275 DUF484 family protein 0.73 1
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_3112 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) 0.71 Pf1N1B4_2172 Protein of unknown function DUF484 0.41 9
Pseudomonas sp. S08-1 0.86 OH686_18170 5'/3'-nucleotidase SurE 0.69 OH686_13790 Protein of unknown function DUF484 low > 80
Pseudomonas simiae WCS417 0.86 PS417_06350 stationary phase survival protein SurE 0.71 PS417_27590 hypothetical protein 0.60 1
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_16600 stationary phase survival protein SurE 0.72 AO353_09045 hypothetical protein 0.37 8
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_4678 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) 0.72 PfGW456L13_843 Protein of unknown function DUF484 0.38 34
Pseudomonas syringae pv. syringae B728a ΔmexB 0.83 Psyr_1371 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase 0.73 Psyr_0184 Protein of unknown function DUF484 0.31 76
Pseudomonas syringae pv. syringae B728a 0.83 Psyr_1371 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase 0.73 Psyr_0184 Protein of unknown function DUF484 low > 86
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_05900 stationary phase survival protein SurE 0.74 AO356_12730 hypothetical protein 0.43 2
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_3040 5-nucleotidase SurE (EC 3.1.3.5) 0.73 Pf6N2E2_4417 Protein of unknown function DUF484 0.59 2
Pseudomonas sp. RS175 0.81 PFR28_00424 '5'-nucleotidase SurE' transl_table=11 0.70 PFR28_04377 hypothetical protein 0.72 2
Pseudomonas stutzeri RCH2 0.79 Psest_2810 5'/3'-nucleotidase SurE 0.67 Psest_3766 Uncharacterized protein conserved in bacteria 0.66 2
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS14845 stationary phase survival protein SurE 0.16 HSERO_RS21470 hypothetical protein 0.32 13
Shewanella loihica PV-4 0.51 Shew_1210 stationary-phase survival protein SurE (RefSeq) 0.17 Shew_0324 hypothetical protein (RefSeq) 0.61 8
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_02820 5'-nucleotidase SurE 0.18 CSW01_00645 DUF484 domain-containing protein low > 62
Shewanella amazonensis SB2B 0.50 Sama_1041 surE stationary phase survival protein SurE (RefSeq) 0.18 Sama_3248 hypothetical protein (RefSeq) low > 62
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_08115 surE 5'/3'-nucleotidase SurE 0.22 OKGIIK_15330 DUF484 domain-containing protein low > 52
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS06595 5'/3'-nucleotidase SurE 0.19 ABZR86_RS15020 DUF484 family protein low > 74
Rhodanobacter denitrificans MT42 0.50 LRK55_RS16375 5'/3'-nucleotidase SurE 0.22 LRK55_RS08305 DUF484 family protein 0.55 49
Marinobacter adhaerens HP15 0.50 HP15_1279 stationary-phase survival protein SurE 0.34 HP15_249 protein containing DUF484 — —
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS16650 5'/3'-nucleotidase SurE 0.23 LRK54_RS08540 DUF484 family protein low > 59
Shewanella sp. ANA-3 0.50 Shewana3_1121 surE stationary phase survival protein SurE (RefSeq) 0.16 Shewana3_0392 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.50 SO3435 surE stationary-phase survival protein SurE (NCBI ptt file) 0.16 SO4307 conserved hypothetical protein (NCBI ptt file) low > 76
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_2296 3'-nucleotidase (EC 3.1.3.6)/5'-nucleotidase (EC 3.1.3.5)/exopolyphosphatase (EC 3.6.1.11) 0.18 B158DRAFT_0245 Uncharacterized protein conserved in bacteria low > 40
Dechlorosoma suillum PS 0.48 Dsui_1968 5''/3''-nucleotidase SurE 0.20 Dsui_0650 hypothetical protein 0.77 8
Rahnella sp. WP5 0.48 EX31_RS07840 5'/3'-nucleotidase SurE 0.15 EX31_RS15160 DUF484 domain-containing protein low > 89
Serratia liquefaciens MT49 0.48 IAI46_03775 5'/3'-nucleotidase SurE 0.14 IAI46_00720 DUF484 domain-containing protein low > 86
Lysobacter sp. OAE881 0.47 ABIE51_RS06485 5'/3'-nucleotidase SurE 0.20 ABIE51_RS03030 DUF484 family protein low > 62
Klebsiella michiganensis M5al 0.47 BWI76_RS22660 5'/3'-nucleotidase SurE 0.13 BWI76_RS01205 DUF484 family protein 0.30 7
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_00840 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase 0.14 H281DRAFT_02201 hypothetical protein 0.65 3
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS10860 5'/3'-nucleotidase SurE 0.17 ABZR87_RS05060 DUF484 family protein — —
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS09100 stationary phase survival protein SurE 0.13 BPHYT_RS01660 hypothetical protein low > 109
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS22255 5'/3'-nucleotidase SurE 0.14 QEN71_RS00360 DUF484 family protein 0.81 126
Paraburkholderia graminis OAS925 0.47 ABIE53_002054 5'-nucleotidase 0.14 ABIE53_000427 uncharacterized protein YigA (DUF484 family) 0.55 38
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.3131.1 hypothetical protein 0.19 Xcc-8004.846.1 Protein of unknown function DUF484 0.51 10
Enterobacter sp. TBS_079 0.46 MPMX20_03630 5'/3'-nucleotidase SurE 0.16 MPMX20_04466 hypothetical protein 0.33 14
Escherichia coli ECRC101 0.46 OKFHMN_20480 surE 5'/3'-nucleotidase SurE 0.13 OKFHMN_14425 yigA Uncharacterized protein YigA — —
Escherichia coli ECRC62 0.46 BNILDI_10845 surE 5'/3'-nucleotidase SurE 0.13 BNILDI_04980 yigA Uncharacterized protein YigA — —
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS13200 stationary phase survival protein SurE 0.16 RR42_RS00610 hypothetical protein low > 128
Escherichia coli ECRC101 0.46 MCAODC_11005 surE 5'/3'-nucleotidase SurE 0.13 MCAODC_04930 yigA Uncharacterized protein YigA — —
Escherichia coli ECRC99 0.46 KEDOAH_07660 surE 5'/3'-nucleotidase SurE 0.13 KEDOAH_13725 yigA Uncharacterized protein YigA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00989 '5'/3'-nucleotidase SurE' transl_table=11 0.13 OHPLBJKB_04240 hypothetical protein low > 73
Escherichia coli BL21 0.46 ECD_02594 broad specificity 5'(3')-nucleotidase and polyphosphatase 0.13 ECD_03686 DUF484 family protein low > 60
Escherichia coli ECRC102 0.46 NIAGMN_18250 surE 5'/3'-nucleotidase SurE 0.13 NIAGMN_12180 yigA Uncharacterized protein YigA — —
Escherichia coli ECOR27 0.46 NOLOHH_12295 surE 5'/3'-nucleotidase SurE 0.13 NOLOHH_06555 yigA Uncharacterized protein YigA low > 57
Escherichia fergusonii Becca 0.46 EFB2_01166 5'/3'-nucleotidase SurE 0.14 EFB2_04827 hypothetical protein low > 86
Escherichia coli ECRC98 0.46 JDDGAC_24145 surE 5'/3'-nucleotidase SurE 0.13 JDDGAC_18050 yigA Uncharacterized protein YigA — —
Escherichia coli Nissle 1917 0.46 ECOLIN_RS15345 5'/3'-nucleotidase SurE 0.14 ECOLIN_RS21870 DUF484 domain-containing protein low > 52
Escherichia coli BW25113 0.46 b2744 surE acid phosphatase (NCBI) 0.13 b3810 yigA hypothetical protein (NCBI) low > 76
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2840 3'-nucleotidase (EC 3.1.3.6)/5'-nucleotidase (EC 3.1.3.5)/exopolyphosphatase (EC 3.6.1.11) 0.15 EX28DRAFT_4479 Uncharacterized protein conserved in bacteria low > 76
Escherichia coli ECOR38 0.46 HEPCGN_19660 surE 5'/3'-nucleotidase SurE 0.13 HEPCGN_13130 yigA Uncharacterized protein YigA low > 85
Erwinia tracheiphila SCR3 0.45 LU632_RS06465 surE 5'/3'-nucleotidase SurE 0.15 LU632_RS24140 DUF484 domain-containing protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF4792 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) 0.16 GFF238 Protein of unknown function DUF484 low > 78
Pantoea sp. MT58 0.45 IAI47_04220 5'/3'-nucleotidase SurE 0.17 IAI47_18405 DUF484 domain-containing protein low > 76
Castellaniella sp019104865 MT123 0.44 ABCV34_RS03030 5'/3'-nucleotidase SurE 0.12 ABCV34_RS13460 DUF484 family protein low > 48
Magnetospirillum magneticum AMB-1 0.33 AMB_RS12675 5'-nucleotidase SurE 0.12 AMB_RS21495 DUF484 domain-containing protein — —
Azospirillum brasilense Sp245 0.32 AZOBR_RS15460 5'-nucleotidase 0.12 AZOBR_RS03970 hypothetical protein low > 97

Not shown: 37 genomes with orthologs for PP_1620 only; 5 genomes with orthologs for PP_5229 only