| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_2903 | | peptidyl-prolyl cis-trans isomerase B (rotamase B) | 1.0 | PP_5084 | | penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase | 0.32 | 8 |
| Pseudomonas sp. RS175 | 0.81 | PFR28_02745 | | Peptidyl-prolyl cis-trans isomerase cyp18 | 0.83 | PFR28_05006 | | Penicillin-binding protein 1A | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.80 | Pf6N2E2_151 | | Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) | 0.80 | Pf6N2E2_3761 | | Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.79 | AO356_01015 | | peptidylprolyl isomerase | 0.84 | AO356_09420 | | peptidase | low | > 104 |
| Pseudomonas syringae pv. syringae B728a | 0.79 | Psyr_1733 | | Peptidyl-prolyl cis-trans isomerase, cyclophilin type | 0.82 | Psyr_0402 | | Peptidoglycan glycosyltransferase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.79 | Psyr_1733 | | Peptidyl-prolyl cis-trans isomerase, cyclophilin type | 0.82 | Psyr_0402 | | Peptidoglycan glycosyltransferase | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.77 | Pf1N1B4_4004 | | Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) | 0.83 | Pf1N1B4_1544 | | Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.77 | PfGW456L13_2608 | | Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) | 0.79 | PfGW456L13_282 | | Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.76 | AO353_27825 | | peptidylprolyl isomerase | 0.84 | AO353_12470 | | peptidase | low | > 101 |
| Pseudomonas fluorescens SBW25 | 0.76 | PFLU_RS18885 | | peptidyl-prolyl cis-trans isomerase | 0.82 | PFLU_RS02000 | | penicillin-binding protein 1A | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.76 | PFLU_RS18885 | | peptidyl-prolyl cis-trans isomerase | 0.82 | PFLU_RS02000 | | penicillin-binding protein 1A | low | > 109 |
| Pseudomonas simiae WCS417 | 0.75 | PS417_16900 | | peptidylprolyl isomerase | 0.82 | PS417_01955 | | peptidase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.73 | ABZR87_RS10630 | | peptidylprolyl isomerase | 0.34 | ABZR87_RS02625 | | penicillin-binding protein 1A | — | — |
| Ralstonia solanacearum UW163 | 0.72 | UW163_RS12455 | | cyclophilin | 0.33 | UW163_RS06645 | | penicillin-binding protein 1A | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.72 | RALBFv3_RS14985 | | cyclophilin | 0.33 | RALBFv3_RS06970 | | penicillin-binding protein 1A | — | — |
| Ralstonia solanacearum GMI1000 | 0.71 | RS_RS05800 | | cyclophilin | 0.33 | RS_RS14915 | | penicillin-binding protein 1A | — | — |
| Ralstonia solanacearum PSI07 | 0.71 | RPSI07_RS18390 | | cyclophilin | 0.33 | RPSI07_RS10265 | | penicillin-binding protein 1A | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.71 | QEN71_RS06115 | | peptidylprolyl isomerase | 0.36 | QEN71_RS28065 | | penicillin-binding protein 1A | low | > 153 |
| Pseudomonas stutzeri RCH2 | 0.70 | Psest_2304 | | Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family | 0.72 | Psest_3720 | | penicillin-binding protein, 1A family | low | > 67 |
| Paraburkholderia graminis OAS925 | 0.68 | ABIE53_002710 | | peptidyl-prolyl cis-trans isomerase B (cyclophilin B) | 0.35 | ABIE53_003746 | | penicillin-binding protein 1A | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.68 | H281DRAFT_00543 | | peptidyl-prolyl cis-trans isomerase B (cyclophilin B) | 0.36 | H281DRAFT_05609 | | penicillin-binding protein 1A | low | > 103 |
| Rahnella sp. WP5 | 0.68 | EX31_RS22640 | | peptidylprolyl isomerase B | 0.37 | EX31_RS04750 | | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Burkholderia phytofirmans PsJN | 0.68 | BPHYT_RS12445 | | cyclophilin | 0.36 | BPHYT_RS11390 | | penicillin-binding protein 1A | — | — |
| Castellaniella sp019104865 MT123 | 0.68 | ABCV34_RS00375 | | peptidylprolyl isomerase | 0.31 | ABCV34_RS12695 | | PBP1A family penicillin-binding protein | — | — |
| Marinobacter adhaerens HP15 | 0.68 | HP15_2190 | | peptidyl-prolyl cis-trans isomerase B | 0.47 | HP15_473 | | penicillin-binding protein, 1A family | — | — |
| Pseudomonas sp. S08-1 | 0.68 | OH686_03750 | | Peptidyl-prolyl cis-trans isomerase PpiB | 0.76 | OH686_10055 | | Multimodular transpeptidase-transglycosylase | 0.50 | 36 |
| Dechlorosoma suillum PS | 0.67 | Dsui_3088 | | peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family | 0.37 | Dsui_1186 | | penicillin-binding protein, 1A family | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.66 | RR42_RS06335 | | cyclophilin | 0.34 | RR42_RS19040 | | penicillin-binding protein | — | — |
| Serratia liquefaciens MT49 | 0.65 | IAI46_05385 | | peptidylprolyl isomerase B | 0.38 | IAI46_23740 | | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | low | > 86 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.65 | GFF5146 | | Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) | 0.33 | GFF1338 | | Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) | low | > 90 |
| Variovorax sp. SCN45 | 0.65 | GFF553 | | Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) | 0.33 | GFF3310 | | Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) | low | > 127 |
| Pantoea sp. MT58 | 0.65 | IAI47_14340 | | peptidylprolyl isomerase B | 0.38 | IAI47_01860 | | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.65 | DVU1873 | ppiB-2 | peptidyl-prolyl cis-trans isomerase B (TIGR) | 0.29 | DVU0633 | | penicillin-binding protein (TIGR) | — | — |
| Herbaspirillum seropedicae SmR1 | 0.65 | HSERO_RS09310 | | cyclophilin | 0.33 | HSERO_RS20890 | | penicillin-binding protein 1A | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.65 | GFF4441 | | Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) | 0.38 | GFF623 | | Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) | — | — |
| Escherichia coli ECRC101 | 0.64 | MCAODC_27045 | ppiB | peptidylprolyl isomerase B | 0.37 | MCAODC_07610 | mrcA | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Acinetobacter radioresistens SK82 | 0.64 | MPMX26_01727 | | Peptidyl-prolyl cis-trans isomerase cyp18 | 0.41 | MPMX26_02817 | | Penicillin-binding protein 1A | low | > 36 |
| Enterobacter sp. TBS_079 | 0.64 | MPMX20_01101 | | Peptidyl-prolyl cis-trans isomerase B | 0.38 | MPMX20_04284 | | Penicillin-binding protein 1A | low | > 85 |
| Escherichia coli ECRC99 | 0.64 | KEDOAH_20145 | ppiB | peptidylprolyl isomerase B | 0.37 | KEDOAH_11060 | mrcA | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Escherichia coli ECRC98 | 0.64 | JDDGAC_11475 | ppiB | peptidylprolyl isomerase B | 0.37 | JDDGAC_20710 | mrcA | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Escherichia coli ECRC102 | 0.64 | NIAGMN_05880 | ppiB | peptidylprolyl isomerase B | 0.37 | NIAGMN_14850 | mrcA | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Escherichia coli ECOR38 | 0.64 | HEPCGN_06465 | ppiB | peptidylprolyl isomerase B | 0.37 | HEPCGN_15900 | mrcA | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Escherichia coli ECRC101 | 0.64 | OKFHMN_07825 | ppiB | peptidylprolyl isomerase B | 0.37 | OKFHMN_17080 | mrcA | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Escherichia coli Nissle 1917 | 0.64 | ECOLIN_RS03045 | | peptidylprolyl isomerase B | 0.37 | ECOLIN_RS19395 | | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Klebsiella michiganensis M5al | 0.64 | BWI76_RS07085 | | peptidyl-prolyl cis-trans isomerase | 0.38 | BWI76_RS26125 | | carboxypeptidase/penicillin-binding protein 1A | — | — |
| Escherichia fergusonii Becca | 0.64 | EFB2_03536 | | Peptidyl-prolyl cis-trans isomerase B | 0.37 | EFB2_00432 | | Penicillin-binding protein 1A | — | — |
| Escherichia coli ECRC62 | 0.64 | BNILDI_22245 | ppiB | peptidylprolyl isomerase B | 0.37 | BNILDI_02650 | mrcA | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.64 | OHPLBJKB_03156 | | Peptidyl-prolyl cis-trans isomerase B | 0.37 | OHPLBJKB_00307 | | Penicillin-binding protein 1A | — | — |
| Kangiella aquimarina DSM 16071 | 0.64 | B158DRAFT_1021 | | Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family | 0.41 | B158DRAFT_0757 | | penicillin-binding protein, 1A family | — | — |
| Escherichia coli BW25113 | 0.64 | b0525 | ppiB | peptidyl-prolyl cis-trans isomerase B (rotamase B) (NCBI) | 0.37 | b3396 | mrcA | peptidoglycan synthetase; penicillin-binding protein 1A (VIMSS) | — | — |
| Variovorax sp. OAS795 | 0.64 | ABID97_RS17860 | | peptidylprolyl isomerase | 0.32 | ABID97_RS02790 | | penicillin-binding protein 1A | low | > 91 |
| Escherichia coli ECOR27 | 0.64 | NOLOHH_00815 | ppiB | peptidylprolyl isomerase B | 0.37 | NOLOHH_08870 | mrcA | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Escherichia coli BL21 | 0.64 | ECD_00475 | | peptidyl-prolyl cis-trans isomerase B (rotamase B) | 0.37 | ECD_03248 | | penicillin-binding protein 1a, murein transglycosylase and transpeptidase | — | — |
| Enterobacter asburiae PDN3 | 0.64 | EX28DRAFT_2455 | | Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family | 0.38 | EX28DRAFT_4146 | | penicillin-binding protein, 1A family | — | — |
| Erwinia tracheiphila SCR3 | 0.63 | LU632_RS15235 | ppiB | peptidylprolyl isomerase B | 0.38 | LU632_RS22900 | mrcA | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Pectobacterium carotovorum WPP14 | 0.62 | HER17_RS06485 | | peptidylprolyl isomerase B | 0.38 | HER17_RS01745 | | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Shewanella oneidensis MR-1 | 0.62 | SO1790 | ppiB-1 | peptidyl-prolyl cis-trans isomerase B (NCBI ptt file) | 0.41 | SO0280 | mrcA | penicillin-binding protein 1A (NCBI ptt file) | — | — |
| Dickeya dianthicola ME23 | 0.62 | DZA65_RS15980 | | peptidylprolyl isomerase B | 0.37 | DZA65_RS20795 | | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Shewanella sp. ANA-3 | 0.62 | Shewana3_2665 | | peptidyl-prolyl cis-trans isomerase, cyclophilin type (RefSeq) | 0.40 | Shewana3_3900 | | 1A family penicillin-binding protein (RefSeq) | — | — |
| Dickeya dadantii 3937 | 0.62 | DDA3937_RS15095 | | peptidylprolyl isomerase B | 0.38 | DDA3937_RS19580 | | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Dickeya dianthicola 67-19 | 0.61 | HGI48_RS15175 | | peptidylprolyl isomerase B | 0.37 | HGI48_RS19710 | | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | low | > 71 |
| Desulfovibrio vulgaris Miyazaki F | 0.61 | DvMF_0566 | | peptidyl-prolyl cis-trans isomerase cyclophilin type (RefSeq) | 0.28 | DvMF_2630 | | penicillin-binding protein, 1A family (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.61 | Shew_2512 | | peptidylprolyl isomerase (RefSeq) | 0.39 | Shew_0207 | | 1A family penicillin-binding protein (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.61 | MIT1002_02501 | | Peptidyl-prolyl cis-trans isomerase B | 0.38 | MIT1002_00454 | | Penicillin-binding protein 1A | low | > 70 |
| Acidovorax sp. GW101-3H11 | 0.59 | Ac3H11_41 | | Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) | 0.33 | Ac3H11_4700 | | Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) | — | — |
| Shewanella amazonensis SB2B | 0.59 | Sama_1220 | | peptidyl-prolyl cis-trans isomerase B (RefSeq) | 0.40 | Sama_3374 | | penicillin-binding protein 1A (RefSeq) | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.58 | CSW01_09260 | | peptidylprolyl isomerase | 0.38 | CSW01_13335 | | penicillin-binding protein 1A | — | — |
| Caulobacter crescentus NA1000 | 0.26 | CCNA_01030 | | peptidyl-prolyl cis-trans isomerase | 0.27 | CCNA_01951 | | multimodular transpeptidase-transglycosylase PbpY | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.26 | CCNA_01030 | | peptidyl-prolyl cis-trans isomerase | 0.27 | CCNA_01951 | | multimodular transpeptidase-transglycosylase PbpY | low | > 67 |
Not shown: 2 genomes with orthologs for PP_2903 only; 29 genomes with orthologs for PP_5084 only